Basic Information

Gene Symbol
Jra
Assembly
None
Location
JAPVRH010005238.1:3199-4232[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.6 1.6e+03 -0.6 0.1 10 18 64 72 57 74 0.79
2 2 3.2e-17 3.3e-14 52.9 7.9 2 65 215 278 214 278 0.96

Sequence Information

Coding Sequence
ATGAAAACCACTAtcagcgcaacaacaactaccaaCACAGCTGTAACGAATAACAGCAACGTACCGTCGGTTAACATCTTACCCAAAGCGGAACCAAAcgatataaatttaactttccAAACACCAAACGCCGCTGCACCAagtagcaataacaacacagTGAATACGAATAAGCGGCCAATTTCATtagatttgaataaaatggCGGCAAAGAAACAACGTTTGGTCACACCGCTTAGCATCGATTCACCAAATTTGGACAACATGAAAACCATAAATACACCCGACATTGAGAAAATGCTACTAAGCAACGTAATGCCAACACCACAACCTGGTGTGATATTCCCCAGCAAAACGAGTACGGTTACTTCCGAGCAGGAAGCCTATGTGAAGGGTTTCGAGGAGGCGTTGAGTAATTTACATCAGAGCAAAAAGTCACAGGCCGCACAGATAACCAACAACTCCAATAATAATGTAGTGACGAGCGCGCCAACAACCACGGCCAGTGTTGTGGGCACGGGCGTTAGTGGCGGTTCCTTCACCTACACTAATTTAGAAAACTTCCCCGTTGCTATCAAAGATGAGCCACAAAACCCCGGCTCGCCAACGGCGCTCAGCCCAATCGATATGGAAACACAAGAGAAAATCAAGTTAGAGCGCAAACGACAACGAAACCGTGTGGCCGCATCCAAGTGCCGAAAACGTAAACTGGAACGCATTTCCAAGCTGGAAGATAAAGTTAAAATGCTCAAAGGTGAGAACTCTGACCTGGGCGCAGTGGTTAAAACATTGAAGGATCATGTCGCGCAACTGAAAGAACAAGTGATGGATCACTTTAACTCCGGCTGCACAATCTCCATGTTAACGGAGCAGCAAATGTTGTCAACCAAATAA
Protein Sequence
MKTTISATTTTNTAVTNNSNVPSVNILPKAEPNDINLTFQTPNAAAPSSNNNTVNTNKRPISLDLNKMAAKKQRLVTPLSIDSPNLDNMKTINTPDIEKMLLSNVMPTPQPGVIFPSKTSTVTSEQEAYVKGFEEALSNLHQSKKSQAAQITNNSNNNVVTSAPTTTASVVGTGVSGGSFTYTNLENFPVAIKDEPQNPGSPTALSPIDMETQEKIKLERKRQRNRVAASKCRKRKLERISKLEDKVKMLKGENSDLGAVVKTLKDHVAQLKEQVMDHFNSGCTISMLTEQQMLSTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01562505;
90% Identity
iTF_01562505;
80% Identity
-