Basic Information

Insect: Bactrocera latifrons
Gene Symbol: -
Assembly: GCA_001853355.1
Location: NW:6973-53177[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.51 28 4.9 2.9 3 23 324 346 322 346 0.93

2 17 0.24 13 6.0 2.9 3 22 488 507 486 510 0.91

3 17 0.0044 0.24 11.4 1.9 3 23 533 554 531 554 0.91

4 17 0.0024 0.13 12.2 0.6 1 23 571 594 571 594 0.96

5 17 0.061 3.4 7.8 3.8 1 23 599 623 599 623 0.93

6 17 6.6 3.7e+02 1.4 0.6 2 23 647 668 646 669 0.90

7 17 0.0043 0.24 11.4 0.2 2 23 711 733 710 733 0.90

8 17 0.071 4 7.6 0.1 1 21 738 758 738 759 0.94

9 17 6.1 3.4e+02 1.5 0.8 2 23 781 802 780 802 0.86

10 17 0.071 4 7.6 4.2 3 23 815 834 813 834 0.95

11 17 8.8e-06 0.00049 19.9 1.8 1 23 840 863 840 863 0.96

12 17 7.4e-05 0.0041 17.0 0.4 1 23 895 917 895 917 0.96

13 17 0.38 21 5.3 0.1 2 23 928 951 928 951 0.93

14 17 0.26 14 5.8 1.8 2 23 957 980 956 980 0.93

15 17 0.00064 0.036 14.1 3.8 1 23 987 1009 987 1009 0.99

16 17 0.063 3.5 7.8 4.5 1 21 1015 1035 1015 1040 0.93

17 17 2.1 1.1e+02 3.0 0.9 1 14 1046 1064 1046 1065 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.51	28	4.9	2.9	3	23	324	346	322	346	0.93
2	17	0.24	13	6.0	2.9	3	22	488	507	486	510	0.91
3	17	0.0044	0.24	11.4	1.9	3	23	533	554	531	554	0.91
4	17	0.0024	0.13	12.2	0.6	1	23	571	594	571	594	0.96
5	17	0.061	3.4	7.8	3.8	1	23	599	623	599	623	0.93
6	17	6.6	3.7e+02	1.4	0.6	2	23	647	668	646	669	0.90
7	17	0.0043	0.24	11.4	0.2	2	23	711	733	710	733	0.90
8	17	0.071	4	7.6	0.1	1	21	738	758	738	759	0.94
9	17	6.1	3.4e+02	1.5	0.8	2	23	781	802	780	802	0.86
10	17	0.071	4	7.6	4.2	3	23	815	834	813	834	0.95
11	17	8.8e-06	0.00049	19.9	1.8	1	23	840	863	840	863	0.96
12	17	7.4e-05	0.0041	17.0	0.4	1	23	895	917	895	917	0.96
13	17	0.38	21	5.3	0.1	2	23	928	951	928	951	0.93
14	17	0.26	14	5.8	1.8	2	23	957	980	956	980	0.93
15	17	0.00064	0.036	14.1	3.8	1	23	987	1009	987	1009	0.99
16	17	0.063	3.5	7.8	4.5	1	21	1015	1035	1015	1040	0.93
17	17	2.1	1.1e+02	3.0	0.9	1	14	1046	1064	1046	1065	0.87

Sequence Information

Coding Sequence: ATGATCGAACCCGATTTGGACGACACACATCTATGCATTAAATGCAGCTCTACAATTGTTGGACTGGAGGCGTATATCCAACACCGCAAAACGCAGTGCACCAATCTCAATAGCACCGCTGCAAGTAGTAAGCGGGAGCACACCACTACGCACACGGTGCACTCGGAAATAATAACCACGCCACGCGCACATCTCGATCACACCTACGACGCGTTTACGTTTGCCGAGCCGGAGTCATACGCTAAAGATTCGGCACACGGTGGTAAAACCTCCAAATCGCTGTCCGATGCTTACGAGCTGCCGTACGAGCTGGGCGCCGACGTCTTTTTCTCCTCACTGCAACTACAAAGCGTACAAGCAGCCGGGCCCTCAACGAGCGGAAAGCAAGGGCTGAGCGCGCCGAGTCAATCGCTGAGCAACCTGCAACAGCGACAACAAAAACCTGGGCATACCGTACATATTGGTGCGGCAGATGAGCCTTGGATGTCAGATGCACAGGCAAGTGGCAGTAATGTagagcagcaacaaaaatccTATGAAGTTTTTAAACCGCTCACATTCGTGCACGAGTCACCCGAGGCGAGTGAGGAAGAAGAGGAGGATGTGGATGTGGAAATGGATGAGGATGATGATGACTATGATCCGATAGCGGATGCGCATGCGAATGGTGGCAAATGGAAACCACCAACAATGCGTCACTCACCACCGGTGGTGCCCGAAACACACACCGGTGGCAAATGGCGGCCCGAGTTTAGACCCGAATTGAATGTAACACATGCACAGCTCACACGACTCTCGCCGAACTGGGACGAGGCGGTCGAAGAACTGGAAAATGTTGAAGTGCACGAGGGACAGCATCCGCCTGCCGAACATACGAAAGGTAAATGGATACCCGGCACCAAGATGCAACGGCTCGAATATAAGGAGGAAGTAGTCGAGTTAGCCAAATCGGCGAATCAAGCGTACTGGTGTAATATATGTTGTCGACgtttaaaaagcaaaacaaattacGAGAACCATCTGAAGACCGGTTATCACCGCAAACGTGCGGAGCCCGAACGGCAGCTCGAAAAGGCGGCGCTGGGCAATATACAACGTGTTGAATTAAGTAAAAGTTTATTGGCAGCGGCCTTGGCTGAACCCAAACCAACTACCAGCAGCAGTGGTGTTGTAAAAAAGCGTAAACGTCGTGCCATCTACATTAAATGTCAACTCTGCAAGCACAGCATGTTGCGTCATCTAGTGGGCAAGCACTTGATATCGCATTATCACTACCGACGTATGCAGCTGAATCCCACGAAGTCTTTGCACATGATACTGGACAATATACACTCGGTGGTGCTACAATCGCCGTTCCAGTGTCGCCCCTGCCGCTTCTATACGAACACCGAAGAGATGTTTCTGCAGCACTGGAGCTCGCCCACACATTTGGACGCCACCGAGGGACTCGGCAAGTTTTGGTGCAGTTATTGTCACTTCGAATGCGAGGACAACAATCAAATGCGACGCCATCTGCTCAGCGCCGAACACAAGGAGGTCATTTTGGCCATTAATCGTTCCGTGCCCATTTGCATTAGCAAAAAGTTGAGCATCGATTGCAGTCGTTGTCGTCAGAGTTTCCGTTATAACGCCGAGTTGCGACGACACGCCTTGCTCTGTCATCCCGACAAAGAATTGTGCGGCACCGCATCGGACGGCTATCAAAGTCGTTACAAGTGTGAGTTATGCGCGGACAGTTTTCGTTCGAAGGTCGCGTTACAACGTCACGCGAAGAACAAGCACAGCATCAGTAAATATTTCTGTTCCATATGCAAATTGGAATTCAATACGCCTTGCAAGGCGCGCAGACATCGCAAAACGTTGCAGCATCGGAATTGTGCCGCAGCAGCGGAGAAGAATGCGGGTGTGCGACGTGTGGCGTCCACGAAGGACGTCAAGAGTTGTGATAAATGCAATTTTGTCGCCTCTTCGGAAGTGCAAGCCATGCTACACGAACTCTCACATCACAAGAGCGGTGTCACCATGCGTAATACAGTTATCGCTAGAACAAGTAGCGCCACCACCACCAGTAAAAACAGTAAAACCACTGAAAAATCAAAGAAGTCCGTCGTAAGCAAGCAACCCAAACTGAAGTGCAAGGACTGCGAAGAGCTCTTCACCGACAAGGAGGTACTCAAAGCACATCGCGATGCCACGCATCCGCTATTGTGCCACGTCTGTTTGAGTTGTGGTCAAAGTTTTGCGTTGGCCCAAGCGCTTGGCCGTCATACGCGTAACTGTGAGCCGAAGCCAAGTACTTCGAAGGAAGCACAGGCCCAGCGCGGCACGGCAAGTGACTGGCGCTGCGACAAGTGTGATTTCAGCGCCCCCTTCGAATCGGAGTTAATCTTTCATCGTCTGCACCACACTCTTGGTCCGATgactaaaaatcaaattatcgCTTGTCCAATTTGCACGAAAGAGTTTCGTAAGCATTCGTTACGTTGCCATTTGCGACAGCACACGAATGAGAAGATCTTCGCTTGTGAAttgtgtgaaatgaaattttcacgaCGTCACAATCTCAAGGATCACATGAAGATCATACATAATGTGCCAGCGACAGTACAGAAAGATCCACAAGTGTCGTCGGCAGGCGAGGAAATCGCAAAagtgaaaaagagaaaaattgaTGGCGACAAATTTGCTTGTGGTATTTGCTCCAAAGCATTTAGCACAGATTACATGCTGAAAAAACACACAGCGAGTCATGCCACTTTGCCGTCGGAAAATGCTgaaaatacttgtaaatatgAGAATTGCAAATATGTTGCCGCAAGTGCAAGTTTACTGCGCGTTCATGCGGCATCACATGCCAAGGAGCAGCTAAAATGCAATGAACCATCGTGCAACTATGAAGGGAAAAGTTTGCTGCACTTAAAGAGACACTCCCGCACCCACCTAGCGCCAGCTAAGTGGTTTACGTGCGACAAGTGTGAATTCAAGGCGCGCATCAAGGGCCATCTCAAGCgtcacatgcgcacacatactgGGGAAAAACCCTTCCAATGTCGCTACTGTCTCTTCCGCTGCAGTACTTTCGACAATTTGCGTAAGCATGTGCTCAAAACCGGCAAACATCCAGGAAAATTCATCTACGAATGCGAGCATTGCAACAACGTTGGGCAAAAGAAATCCTTCAAAACCAATTCATATCACGAGTTTCAGGCGCACAACGCAGAAATGCATGGCAAGAGAGAGTAG
Protein Sequence: MIEPDLDDTHLCIKCSSTIVGLEAYIQHRKTQCTNLNSTAASSKREHTTTHTVHSEIITTPRAHLDHTYDAFTFAEPESYAKDSAHGGKTSKSLSDAYELPYELGADVFFSSLQLQSVQAAGPSTSGKQGLSAPSQSLSNLQQRQQKPGHTVHIGAADEPWMSDAQASGSNVEQQQKSYEVFKPLTFVHESPEASEEEEEDVDVEMDEDDDDYDPIADAHANGGKWKPPTMRHSPPVVPETHTGGKWRPEFRPELNVTHAQLTRLSPNWDEAVEELENVEVHEGQHPPAEHTKGKWIPGTKMQRLEYKEEVVELAKSANQAYWCNICCRRLKSKTNYENHLKTGYHRKRAEPERQLEKAALGNIQRVELSKSLLAAALAEPKPTTSSSGVVKKRKRRAIYIKCQLCKHSMLRHLVGKHLISHYHYRRMQLNPTKSLHMILDNIHSVVLQSPFQCRPCRFYTNTEEMFLQHWSSPTHLDATEGLGKFWCSYCHFECEDNNQMRRHLLSAEHKEVILAINRSVPICISKKLSIDCSRCRQSFRYNAELRRHALLCHPDKELCGTASDGYQSRYKCELCADSFRSKVALQRHAKNKHSISKYFCSICKLEFNTPCKARRHRKTLQHRNCAAAAEKNAGVRRVASTKDVKSCDKCNFVASSEVQAMLHELSHHKSGVTMRNTVIARTSSATTTSKNSKTTEKSKKSVVSKQPKLKCKDCEELFTDKEVLKAHRDATHPLLCHVCLSCGQSFALAQALGRHTRNCEPKPSTSKEAQAQRGTASDWRCDKCDFSAPFESELIFHRLHHTLGPMTKNQIIACPICTKEFRKHSLRCHLRQHTNEKIFACELCEMKFSRRHNLKDHMKIIHNVPATVQKDPQVSSAGEEIAKVKKRKIDGDKFACGICSKAFSTDYMLKKHTASHATLPSENAENTCKYENCKYVAASASLLRVHAASHAKEQLKCNEPSCNYEGKSLLHLKRHSRTHLAPAKWFTCDKCEFKARIKGHLKRHMRTHTGEKPFQCRYCLFRCSTFDNLRKHVLKTGKHPGKFIYECEHCNNVGQKKSFKTNSYHEFQAHNAEMHGKRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01564168;
90% Identity: iTF_00190953;
80% Identity: -