Basic Information

Insect: Bactrocera latifrons
Gene Symbol: salm
Assembly: GCA_001853355.1
Location: NW:443194-475574[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 4.6e-06 0.00026 20.8 0.9 1 23 625 647 625 647 0.98

2 7 9.1e-06 0.00051 19.9 2.1 1 23 653 675 653 675 0.98

3 7 0.015 0.86 9.7 1.5 2 23 1041 1062 1040 1062 0.98

4 7 6.5e-08 3.6e-06 26.6 0.5 1 23 1068 1090 1068 1090 0.98

5 7 0.0002 0.011 15.6 2.3 1 23 1100 1122 1100 1122 0.98

6 7 0.034 1.9 8.6 3.1 2 23 1570 1591 1569 1591 0.97

7 7 3.4e-08 1.9e-06 27.5 1.4 1 23 1597 1619 1597 1619 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	4.6e-06	0.00026	20.8	0.9	1	23	625	647	625	647	0.98
2	7	9.1e-06	0.00051	19.9	2.1	1	23	653	675	653	675	0.98
3	7	0.015	0.86	9.7	1.5	2	23	1041	1062	1040	1062	0.98
4	7	6.5e-08	3.6e-06	26.6	0.5	1	23	1068	1090	1068	1090	0.98
5	7	0.0002	0.011	15.6	2.3	1	23	1100	1122	1100	1122	0.98
6	7	0.034	1.9	8.6	3.1	2	23	1570	1591	1569	1591	0.97
7	7	3.4e-08	1.9e-06	27.5	1.4	1	23	1597	1619	1597	1619	0.99

Sequence Information

Coding Sequence: atgaaaaatcatATATCAACTGTTCTGTGTGAAATGCGTAGTGATTTCAAAGATAATcatcaagaaacaattaataaaatgatACAATTTGGCACCGTTAAATATGGTATCGTCAAACAATTGAAAGACCGTGCGCACAGCGTGGAGAAAGATGAGTCCAGCGATCAGGAGGAGAATGGTGCTTGCTGCTCACCCATTGCTAGTCAAGACGTGGCGAGCAATACCGAAACGACAGCAACAAGTGCCGCAGTAGCGGCAACAACAGCCATGCCCACAGTTATGCTTGCAACGCCGGCACACAGCGCAATTGGCAATGATTTGTCCGTTGCGGCACAAGTGCAAGATCGCACTCAAAGCGCAGCGGATGCGCTTGaacaaagtacaacaacaacaatgagcgtGGCGAGTGAAGATCACAATCACAACAACactagcaacagcaacagcaataatgcTATGTCCGGTGTATCACCGACGCGACTAGAGCAGGCGCGCGGTTCAACACCCGTGGAGCGCCTACTACAATTGAAACAGCTTAGCGATGCGGCCGCGTCGGCGATGGTGGAAGCGAGCGCAGCGTCAGCAATTAGCGTTGCCAGCACACCAACATACAATACATATCCGCTAGATAGTGCTAGTTTTGTGgctaacaataacaaatttggtGCGCCCACACCAATGGACACTGAAGAGACGGAGGAGAGTACGCTTTATACATCGGCTGGTACGATGGCAAAGCAGCGCGCCACACTAGCAGAGCTAGATAATAAGGAAGTGGAAGAGAATGGTGATGAAGATGAAGATCAACAAACTGCCCAAGAGTTAGCTGTAAAGCAGCGCGCCGCGGAATTAGCGGCGGCTAGCGCAGCGCTAACAAATGCCAACAGTATGGATGTTAGTAATGGCGCGGTCACCAGCGAAGCAGATGACATTGCAAAGAGCGCTGCCGCCGCGCTTACGCCCACAGCGAGCGCGCTAGCTAGCGCAGCTGGTTTACCACAAGCCGCGGCCGCCGCCGCTTTCGGCGCTGCGCCGGTCAACCTGGAAGCCATACAAAACATGCAAATGGCTATCGCGCAATTCGCCGCCAAGACGATAGCGAATGGCGCACAGGGTGGCGATAATGATGCGGCAATGAAACAGTTAGCTTTCTTGCAGCAAGCGCTGTTCaatttgcagcaacaacaactcttTCAAATACAACTCATTCAACAATTACAATCGCAATTGGCCATGAATCAGTCGAAGGGTGCGAGTGATGGTGAAGTTGGCGACGGCGATGAGTTGGAGGAAGAGCGCGAAGACGGCGAAGAAGATACATACGAAGAGGAGGAACGCATTGCGGAAATGGAGTTGCGCCAGAAGGCGGAGGCGCGCATGGCCGAGGCTAAAGCGCGTCAACATCTCATCAATGCTGGTGTGCCGCTGCGCGATGAAGCTGCCATCGACGATCGGGAAACTAGTTCAGCTGACACCAGCGGCAGCGCGCTGAACGGTACAGAGTCACTCAAGCGCAAGCGCGAAGATGACGCTGATGCTTTTGAGGCTGTGGCTAGCAGGCGCATGAGTGTGGAGGCCTCACAGCTCAGCGCTACACGCGCGAGTTCGCAAATGCCCAGCGGTATGGATGCGTTGAGTAAGCTGaaggaaatggaaaatatgCCACTGCCCTATGGTACTGATCTCGCCTCGAGCATAATTACCAATCACGATGATCTGCCTGAGCCCAATTCGCTGGAGATGTTGCAAAAGCGCGCGCAAGAGGTGCTAGACTCCGCCTCGCAGGGCATACTTGCCAACAATATGGCTGACGAATTTGCGTTCAGGGATAAGAACGGCGATGGCAAGAATCGCAATGAACCGTTCTTCAAGCATCGCTGCCGCTACTGTGGCAAGGTGTTTGGCTCCGATTCGGCgctacaaatacacatacgcTCACATACCGGCGAGCGACCATTCAAATGCAATGTCTGCGGCAGTCGTTTCACCACCAAAGGCAATCTGAAGGTGCACTTTCAGCGGCACGCGCATAAGTTCCCGCATGTGCCAATGAATGCCACACCGATACCCGAGCACTTGGACAAATTTCACCCACCGTTGTTGGACCAAATGTCGCCGGACAGCTCGCCCTCACACACACCGGCTGCGCTGCCACAACaaatgccacaacaacagcTGCCGCCAGTGTCGTTGCCGCTACCCTTTCCACCAAGCGCCGGCTTTCCTGGCTTAACCGGTCTCTATCGGCCACCAATGGAGTTGTTGAAGTCACTAGGTAACGTCGGCTTTCCAAATCCATTCTTTCCGCAAATGTCTAATGCCGTTAGTGAGTCACGCGCTGAAGCGCCGGCGGCACAGACCACAGCCAAAGAGCATAATCAAGATTTGCCGACCGATTTGCGTAAGTCGTCGGCATCCAACTCACCGGAGTTGACAGTAGTGAAGACTGAAATCACCGACgagaaggaagaagaagacgCGGTCAAACAAACGACGGCGATCGCGCAACCAGCAGAAACTCCGGCGGTTGTGGCCGCAACGGAGGACACCACACCCACACtggctataaaaattaaagaagagcGCATCGACACGGATTCGCAAGATGACGAGTTGGAACGTACGGAAACACCAAACGCACAGTTGACCCCCTCACCGGCACGCGCAAATGCTACAACGCCGACACAGACGTGCGCCAGCACGCCTTTCACTCCACCAACACCCACCTCAAAGTCGTTGGCATTGCCACCTGTTGTGCAGCCAGCGCAGCCGCCCATCACAATGCATCCACATCCGTCACCCGGCTTGAACAATCATTTCGATCACTTGCCCACACCGGGTCAGCTGCCACCATCTCTGCATCATCGCGACGACTTCTTTGCCGAGCGTTTTCCGCTGAACTTTACCAAAAATCTCTCACCCGAGCACCATTCGCCTATACGTTCGCCGGCGCATCTGCAGCGCTCGCCATTCTTCAATCCAATCAAACATGAGATGGCACTGTTGCCACGCCCACACAGCAATGACAACTCGTGGGAGAATTTCATAGAAGTTTCGAATACTTCGGAAACGCTGAAATTGAAGGAACTCATGAAGAACAAGAAATTGACTGACCCGAATCAATGCGTCGTATGTGATCGTGTGCTGTCGTGTAAGAGCGCTTTACAGATGCATTACCGTACACACACTGGCGAAAGGCCCTTCAAGTGCCGTATTTGTGGACGCGCCTTCACTACGAAAGGCAACCTAAAGACACATATGGCTGTGCATAAGATACGGCCACCCATGCGCAACTTCCACCAATGTCCTGTTTGTCATAAGAAGTATTCGAACGCGCTGGTCTTGCAGCAGCACATACGTCTGCATACCGGCGAGCCAACCGATTTGACACCCGAACAGATACAAGCTGCCGAAATACGCGATCCGCCGCCATCGATGATGCCGGGCGCGTTTATGAATCCCTTCGCAGCGGCGGCTTTCCACTTCGGCGCTATGCCAGGTGCCGGCGCTGCCATGGGTCATTTAGGACCACACAACGGACTTGGTTCGGAGTCGTCGCAAGGCGATATGGATGAAAATATCGATTGTGGCGATGACTATGACGATGACATGTCGTCCGAGCACATGTCCAGCGCACACGACTTGGATGTGAGCGATCGTCCGCGTTCCAGCGATGACTTTAAAGGCCTACTCTTCGAGCAAAAGCTACGTATCGATGCTACCGGCGTCGTAAATACCACACCGCGTCCACATTCAACGGTCAGCAATGCGAACTCCGTAAATTCAGCGCCAACCAGTCCCAGTTCAGCGCCGCGCCACTGTTCCACGCGTGCCAGTTCACCTGCGCGCTCCATGTCTGAGGCATCGCAAGGCGCACTCGATCTCACGCCACGCGCCATGCCCACGCACGCCAAAAGTAGCTCTCACTCACCGGCCCCGACGTCGGCAACGCCTGCAAGTGGACGCAAGTCGCCCACATCGCCGTCGCAGCGCAACAGTAGCGCCAATAGCAGCATCACTAGAAGTCCAAATCCAACGTCCATACAAAAGCCCCAAACGAGTCCCGCTTCTACGCTCACCTCACCATTGGTGCCAACATCAGCCGTTGACTGTCTGCCACCAGTGTTGCACCATCACTTGCAACAGCAGCATCAGCAGCTGATGCAACAGCAAGCGGTCGCGGCGGCAGCAGCGCATGCTCAAGCGCAAGCGCAACATCATCACCAACAATTGCAACAGCATGCCGTCGCTATGCATGCCGAGCAGTTGCGTCGCGAACATCAAATCAAACAGGAGCATGCGGCACATCAGCATCAACTGCgtcaacaccaccaccaccagcagcagcaacaacaacaacaacaagacacgCATGCGTCTGCACATTCACCGCATCAGCTGCCATTACCACCGTCGCCGCATTTGGCGCATCAcctgcaacagcaacaccagcaagcagcggcggcggcagcagcagccgcagcagcgcaacaacaacagccgacGGGCGCTATGCCACCACAAGGCCCACAACCACCCAATCCATTGGTGGCGGCGCGGCCACCGTTCGGCATGTTTCCGAACCTGCCGCTCTTCCCGCCGGCCACAGCGCAAACGATGTGCTCCGCTATGAATACGATTGCGCAATCGGTAATGCCGGCGGCACCATTCAATCCACTCGCACTTTCCGGCGTGCGTGGCAGCACCACCTGCGGCATCTGTTTCAAAACATTCCCCTGTCACTCAGCTCTAGAAATACACTATCGCAGCCACACCAAGGAGCGACCGTTCAAGTGTACCATCTGTGATCGCGGTTTTACCACAAAGGGCAACCTCAAACAACATATGCTGACACATAAAATACGGGATATGGAGCAGGAAACCTTCCGGAATCGTGCCGTAAAATGA
Protein Sequence: MKNHISTVLCEMRSDFKDNHQETINKMIQFGTVKYGIVKQLKDRAHSVEKDESSDQEENGACCSPIASQDVASNTETTATSAAVAATTAMPTVMLATPAHSAIGNDLSVAAQVQDRTQSAADALEQSTTTTMSVASEDHNHNNTSNSNSNNAMSGVSPTRLEQARGSTPVERLLQLKQLSDAAASAMVEASAASAISVASTPTYNTYPLDSASFVANNNKFGAPTPMDTEETEESTLYTSAGTMAKQRATLAELDNKEVEENGDEDEDQQTAQELAVKQRAAELAAASAALTNANSMDVSNGAVTSEADDIAKSAAAALTPTASALASAAGLPQAAAAAAFGAAPVNLEAIQNMQMAIAQFAAKTIANGAQGGDNDAAMKQLAFLQQALFNLQQQQLFQIQLIQQLQSQLAMNQSKGASDGEVGDGDELEEEREDGEEDTYEEEERIAEMELRQKAEARMAEAKARQHLINAGVPLRDEAAIDDRETSSADTSGSALNGTESLKRKREDDADAFEAVASRRMSVEASQLSATRASSQMPSGMDALSKLKEMENMPLPYGTDLASSIITNHDDLPEPNSLEMLQKRAQEVLDSASQGILANNMADEFAFRDKNGDGKNRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAHKFPHVPMNATPIPEHLDKFHPPLLDQMSPDSSPSHTPAALPQQMPQQQLPPVSLPLPFPPSAGFPGLTGLYRPPMELLKSLGNVGFPNPFFPQMSNAVSESRAEAPAAQTTAKEHNQDLPTDLRKSSASNSPELTVVKTEITDEKEEEDAVKQTTAIAQPAETPAVVAATEDTTPTLAIKIKEERIDTDSQDDELERTETPNAQLTPSPARANATTPTQTCASTPFTPPTPTSKSLALPPVVQPAQPPITMHPHPSPGLNNHFDHLPTPGQLPPSLHHRDDFFAERFPLNFTKNLSPEHHSPIRSPAHLQRSPFFNPIKHEMALLPRPHSNDNSWENFIEVSNTSETLKLKELMKNKKLTDPNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPPSMMPGAFMNPFAAAAFHFGAMPGAGAAMGHLGPHNGLGSESSQGDMDENIDCGDDYDDDMSSEHMSSAHDLDVSDRPRSSDDFKGLLFEQKLRIDATGVVNTTPRPHSTVSNANSVNSAPTSPSSAPRHCSTRASSPARSMSEASQGALDLTPRAMPTHAKSSSHSPAPTSATPASGRKSPTSPSQRNSSANSSITRSPNPTSIQKPQTSPASTLTSPLVPTSAVDCLPPVLHHHLQQQHQQLMQQQAVAAAAAHAQAQAQHHHQQLQQHAVAMHAEQLRREHQIKQEHAAHQHQLRQHHHHQQQQQQQQQDTHASAHSPHQLPLPPSPHLAHHLQQQHQQAAAAAAAAAAAQQQQPTGAMPPQGPQPPNPLVAARPPFGMFPNLPLFPPATAQTMCSAMNTIAQSVMPAAPFNPLALSGVRGSTTCGICFKTFPCHSALEIHYRSHTKERPFKCTICDRGFTTKGNLKQHMLTHKIRDMEQETFRNRAVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01564050;
90% Identity: iTF_00193847;
80% Identity: -