Basic Information

Insect: Bactrocera latifrons
Gene Symbol: -
Assembly: GCA_001853355.1
Location: NW:216945-219422[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0023 0.13 12.3 0.1 2 23 291 313 290 313 0.95

2 10 0.001 0.058 13.4 4.9 1 23 320 343 320 343 0.94

3 10 0.0087 0.49 10.5 0.1 1 23 349 374 349 374 0.93

4 10 0.001 0.059 13.4 5.9 1 23 401 423 401 423 0.97

5 10 0.0028 0.16 12.0 0.4 1 23 429 451 429 451 0.97

6 10 0.0001 0.0058 16.5 0.8 1 23 458 481 458 481 0.98

7 10 0.73 41 4.4 2.8 1 17 487 503 487 509 0.77

8 10 8.1e-05 0.0045 16.9 1.9 1 23 515 537 515 537 0.98

9 10 0.00069 0.039 13.9 3.2 1 23 544 566 544 566 0.97

10 10 0.049 2.7 8.1 0.9 1 23 572 594 572 594 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0023	0.13	12.3	0.1	2	23	291	313	290	313	0.95
2	10	0.001	0.058	13.4	4.9	1	23	320	343	320	343	0.94
3	10	0.0087	0.49	10.5	0.1	1	23	349	374	349	374	0.93
4	10	0.001	0.059	13.4	5.9	1	23	401	423	401	423	0.97
5	10	0.0028	0.16	12.0	0.4	1	23	429	451	429	451	0.97
6	10	0.0001	0.0058	16.5	0.8	1	23	458	481	458	481	0.98
7	10	0.73	41	4.4	2.8	1	17	487	503	487	509	0.77
8	10	8.1e-05	0.0045	16.9	1.9	1	23	515	537	515	537	0.98
9	10	0.00069	0.039	13.9	3.2	1	23	544	566	544	566	0.97
10	10	0.049	2.7	8.1	0.9	1	23	572	594	572	594	0.96

Sequence Information

Coding Sequence: ATGAATAATCAACTTACGCGCAATAATTTGCAAGAATTCTGTCGAACTTGCTTAAGCAGTTTGCAAAAACGTCGCAAACGTGAAAAGGAGGATACGCCTACTAGTTTTCAACAGCTGAAGGTTAAGGTTAATCAAGGAGATGACGAAAATGATTCTGAAACAAATCATAGTTATAATCTTAGTCTGCTACCgcaattgcaaaaattattcatgTTATTTACTTCCTTGGAAATATCAGAGGATAGCGATGAAGATGCTTACCCACGAAGTCTATGTCAACTATGCTATGAAAAAATGATTGATTTCCAAGAGTTTCGAAACTTGGCCATTAATTCTGCGGAAGTCTTATACAAAATTGTTAATAGTTTGGATGATGAAATGCCCAAAACTTCTGCTGAGACACCAACGTTTCAAACAATTGAAATTACTAAAGAGATAAAAACAGAGACTGTAGTAAGGGAAAGAAGCTACCAATTcaatgatgacgatgatgatgatgatcaGTTGcttttACCAGAACTAGCTCCGTTGATGGAACGACCAATTAAAACAGAACCGGAAAACTATTATAAATCTGAGTCTGAAACTATATTACCAAATGATGATAATTCGGAAAATTCATCGAATGTTGTTGTAAAGCATGAAATTGATTCGGAATACGAGGAAGATAATTCCCTATTCTATGAACGTAATGCATTAAGCGCAGCAGATAACTCAGTTAGCGATGATGCAGATGATGAGGAACATGCTTTGAGAAATGGCGCGGCCAATACGTCCAGTATGTCTCTTAATAACTCACCAGTAACTGTAGGAGGAAGACAAAGGTTTAGTGCATCCTCCCGTAAACGCGATCGCAACAAAAAGTCATTAAAGTGTCCTCGTTGTGATAAACAAGTCTATAAAAAAGTGTACCTGGACGCTCACATTCGGGCCGTGCATGAAGGGTTTGAGAAGCCGTTTCTTTGTTTGGAATGTCAAAAGGATTTCACACGCTACGAACATCTACATACGCATATTCAATCTAAGCATTTAATCAAACAACGATTTATATGCGGTTTAAATGGCTGCGATGCCGTTTTTAAGTTGAGCAATACTTTGGAGACTCATCGACAAGTCGTACATACagCTACGTTTTCATACGGCCTAAAGGATATGTTAGAACTTCACCAAGCTCAACTGAATGAAGAAGTAGAGATAAACCATATCTGTCAACACTGTTTCAAGACATACAGCTCAAAACGTGCACTCTCCGAACATTTGAAGCGACATGCCCAAATCAAGGATCATGTTTGTAAAGTATGTGGCGTTGCCAAAGTAACGCGCACGGAGCTATTAACGCATATGCGTATACATAAACCGAATCTGGAGAAATTCAAGTGCAGCATTTGTCCGCAGGAATTCAACcataaaaatgctatatctcgcCATGTGCGTGTCGTACACGAGGGCCAACGACGCTTTCCATGCAGTTTTTGTCCCAAACGTTTTGGTACACGTAATTCGCAAGTATGCCATGAACGTCTACACACTGGCGAACGTCCGTTCAATTGTGAACTCTGTCACAAGCGGTACGCTCAAGTGGAAGGCCTCAAATCACATATGAAAAGTCATGACAAGAACTTGCGCACACATGTCTGCTCTTTTTGTTCGCAACGttttataacaagaaaaaatctaaTCGATCACGAAAAGCGTCACCGAAGTGATAAGCCCCATATATGTAACACCTGTAGTCGTGGGTTCTTTTCAATTGAAGATCTGGGTGTGCATAAGCAGTCGCATACGGAAGAAGAATTGCGTGAGATGGCGTGCAATGAATATGAGTTGTATCAAGATGCTGGCGATAGTCTTGGAGAGCACGTAATGGAAACCGAATCAATTAACGACCAAGGCCACCAGGCATATATGGGCTATAGCAGTTCGCAGAGTAGCAACTGA
Protein Sequence: MNNQLTRNNLQEFCRTCLSSLQKRRKREKEDTPTSFQQLKVKVNQGDDENDSETNHSYNLSLLPQLQKLFMLFTSLEISEDSDEDAYPRSLCQLCYEKMIDFQEFRNLAINSAEVLYKIVNSLDDEMPKTSAETPTFQTIEITKEIKTETVVRERSYQFNDDDDDDDQLLLPELAPLMERPIKTEPENYYKSESETILPNDDNSENSSNVVVKHEIDSEYEEDNSLFYERNALSAADNSVSDDADDEEHALRNGAANTSSMSLNNSPVTVGGRQRFSASSRKRDRNKKSLKCPRCDKQVYKKVYLDAHIRAVHEGFEKPFLCLECQKDFTRYEHLHTHIQSKHLIKQRFICGLNGCDAVFKLSNTLETHRQVVHTATFSYGLKDMLELHQAQLNEEVEINHICQHCFKTYSSKRALSEHLKRHAQIKDHVCKVCGVAKVTRTELLTHMRIHKPNLEKFKCSICPQEFNHKNAISRHVRVVHEGQRRFPCSFCPKRFGTRNSQVCHERLHTGERPFNCELCHKRYAQVEGLKSHMKSHDKNLRTHVCSFCSQRFITRKNLIDHEKRHRSDKPHICNTCSRGFFSIEDLGVHKQSHTEEELREMACNEYELYQDAGDSLGEHVMETESINDQGHQAYMGYSSSQSSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00193065;
90% Identity: iTF_00193065;
80% Identity: -