Basic Information

Insect: Bactrocera latifrons
Gene Symbol: -
Assembly: GCA_001853355.1
Location: NW:64491-67755[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2.6 1.5e+02 2.7 0.2 6 23 277 294 277 294 0.96

2 13 0.00093 0.052 13.5 2.5 1 23 300 323 300 323 0.95

3 13 0.0036 0.2 11.7 0.8 1 23 331 353 331 353 0.97

4 13 0.00015 0.0085 16.0 0.1 2 23 364 386 363 386 0.97

5 13 0.023 1.3 9.1 2.6 1 23 392 414 392 414 0.96

6 13 0.00026 0.014 15.3 0.2 2 23 431 452 430 452 0.97

7 13 0.29 16 5.7 1.4 1 23 459 482 459 482 0.96

8 13 0.0011 0.061 13.3 1.8 1 23 489 511 489 511 0.97

9 13 0.0013 0.071 13.1 3.8 3 23 519 540 517 540 0.95

10 13 0.0024 0.13 12.2 0.6 2 23 564 585 564 585 0.97

11 13 8.3e-07 4.6e-05 23.1 4.1 1 23 591 614 591 614 0.96

12 13 7.3e-05 0.0041 17.0 1.9 1 23 630 652 630 652 0.97

13 13 8.3e-07 4.6e-05 23.1 4.1 1 23 658 681 658 681 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2.6	1.5e+02	2.7	0.2	6	23	277	294	277	294	0.96
2	13	0.00093	0.052	13.5	2.5	1	23	300	323	300	323	0.95
3	13	0.0036	0.2	11.7	0.8	1	23	331	353	331	353	0.97
4	13	0.00015	0.0085	16.0	0.1	2	23	364	386	363	386	0.97
5	13	0.023	1.3	9.1	2.6	1	23	392	414	392	414	0.96
6	13	0.00026	0.014	15.3	0.2	2	23	431	452	430	452	0.97
7	13	0.29	16	5.7	1.4	1	23	459	482	459	482	0.96
8	13	0.0011	0.061	13.3	1.8	1	23	489	511	489	511	0.97
9	13	0.0013	0.071	13.1	3.8	3	23	519	540	517	540	0.95
10	13	0.0024	0.13	12.2	0.6	2	23	564	585	564	585	0.97
11	13	8.3e-07	4.6e-05	23.1	4.1	1	23	591	614	591	614	0.96
12	13	7.3e-05	0.0041	17.0	1.9	1	23	630	652	630	652	0.97
13	13	8.3e-07	4.6e-05	23.1	4.1	1	23	658	681	658	681	0.96

Sequence Information

Coding Sequence: ATGCAAACGGACTTAACGCATTGCAGCTTGTGTTTATATCAAGATAAAATAGTAATACCCTTGTGCGATGACGTTAGTAAGACTTCGGCGGACATTTTGGCTACGGTGCACAAATTTATGGGATTGTTGCTTACTAGTAACGATGCTATATGTGTGAATTGCTGGGCCAGCGTAGacaattttcgcaaattttgcTTGCTGATAGCTGAGCGACAGGCGGCGGACACGCAGCAAGATACAGCGCTTAAGTGCTCATtcgaaaagtatgcaacagaAAATTGCTCTGCGAATGATAGTGTTATGCATAAAGCTACACAAAACAGGACTGTTCCCCTAAACCGCAAGGATGTAAGCTTGAAGACacacgaaaatataaaaaccagtCCGAAGGGGAGTTTCAAAGTACAAAGCGAAGCAGAAACACAACTCGAGCAACAACCAGCATTTGTAGAAGTAAGAAATGGTGCCACCACAATGGCGACACTGGCGTTGGAAGAGCAAGCTAACAATGTAAAAAACAGACAGCATACGCATCCGCAACTCAATAAGACTGATATGCAAGACACAACACTGCAACAAAACctaacacatacaaatactGAAGCAGAGCGCGACACAAACACACTATCTGTTACAGAAAGCATTATAATTGCATCGAAAAATGGAAGCCCACGGCGTGACAATGCCGAAAGTCAGGCCGCGGAGGACAAATTGATTGCCAAGCATTTGCAGCTGATATGTGAAGTGTGCGAATTTGAAGCGAAATGCTTTAAATCACTTAAAGTGCACTACAAGCGGCTACATAATACCAACGGTTATGTAGTTTGCTGTGAGAAGCGTCTTTATAAGCGCTTTATGTTGTTAGATCACATAAATGTACATCGTAATCCCACATACTTTTTctgcaCCGACTGCGACATGAACTTCGCTGACCGCCTTTGCCTGCGCAATCATATGCTGCTGAAGCATCCGAAAGCAACAGAGCTGCCGCACGTGTGCGCAATATGCGATGCGCGTTTTGCTAAAGTGCGGTTTCTGCAGCAACATGCGCGCAAGCATATGAACGACGCACAGGATACGGAACAGCAGCAGTGCGCGATCTGCGCGAAGAGCTTTGCGAATGCCGTGCGCCTGCAAGAGCATATGAAGCGTGTACACGACAACAGCAAGTTATTTGTATGCAAACACTGCGGGCAAGAAGTGAGCGGCAAGCAGTGCTATGTGCGTCACTTGGCGCAACACGGCGCGCGGCGCGAGTCCACAAGCGCCAAGCGGCGCGGTCAAGGCGTTCAGTGTACCGAGTGCGATAAATGGCTAGCGAACAAATCTAGCTTGCGTGTGCACATGATCCGACATACGGACCCAACGAGCATGTACACCTGTCAATTGTGTGATACGAAAGAGGCGACGCGTGTAGCACTGAACGAACACAAGCGTCTGTGCCACGGCATTGAGCAGCAGGCACATGTATGTCAGGTGTGTGCGCGCAACTTCAGCACAACGCGGCGCTTGCGGGAGCACATGGCCACCCACACCGGGGAAGATCTCTACGGTTGCAACTACTGTGACAAACGTTTTAAGTGCTCATCCAATTTATACGCGCATCGCAAGTGGAAACACCCAACAGAGTGGGCGCAAGATCAAAGCGAGTACAAGCGTCTGTGCCATGCCATTGAGAAGCAGCTAAATGTTTGTCAGGTGTGTGCGCGCAACTTTAGCTCAACGCGGCGGTTGCGGgagcACATGGCCACTCACACCGGGGAAGATCTCTACACCTGCAACTACTGCGACAAACGTTTTAAAAGCAATTCCAATTTATACACGCATCGCAAGTGGAAACACCCAACAGAGTGGGCGCAAGATGCGAGCGGCAAGGAGTTAgAGCCACATGTTTGTCAGGTGTGTGCGCGCAACTTCAGCACAAAGCGGGGGTTGCGGgAGCACATGACCACCCATACCGGGGAAGATCTCTACACCTGCAACTACTGTGACAAACGTTTTAAAAGCAATTCCAATTTATACACGCATCGCAAGTGGAAACACCCAAAAGAGTGGGCGCAAGATCAGAGCGGCAAGGAGTTAGGCGATAAacattga
Protein Sequence: MQTDLTHCSLCLYQDKIVIPLCDDVSKTSADILATVHKFMGLLLTSNDAICVNCWASVDNFRKFCLLIAERQAADTQQDTALKCSFEKYATENCSANDSVMHKATQNRTVPLNRKDVSLKTHENIKTSPKGSFKVQSEAETQLEQQPAFVEVRNGATTMATLALEEQANNVKNRQHTHPQLNKTDMQDTTLQQNLTHTNTEAERDTNTLSVTESIIIASKNGSPRRDNAESQAAEDKLIAKHLQLICEVCEFEAKCFKSLKVHYKRLHNTNGYVVCCEKRLYKRFMLLDHINVHRNPTYFFCTDCDMNFADRLCLRNHMLLKHPKATELPHVCAICDARFAKVRFLQQHARKHMNDAQDTEQQQCAICAKSFANAVRLQEHMKRVHDNSKLFVCKHCGQEVSGKQCYVRHLAQHGARRESTSAKRRGQGVQCTECDKWLANKSSLRVHMIRHTDPTSMYTCQLCDTKEATRVALNEHKRLCHGIEQQAHVCQVCARNFSTTRRLREHMATHTGEDLYGCNYCDKRFKCSSNLYAHRKWKHPTEWAQDQSEYKRLCHAIEKQLNVCQVCARNFSSTRRLREHMATHTGEDLYTCNYCDKRFKSNSNLYTHRKWKHPTEWAQDASGKELEPHVCQVCARNFSTKRGLREHMTTHTGEDLYTCNYCDKRFKSNSNLYTHRKWKHPKEWAQDQSGKELGDKH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00193751; iTF_00190860; iTF_00190138;
90% Identity: iTF_00190138; iTF_00193751;
80% Identity: -