Basic Information

Gene Symbol
dnajc2
Assembly
GCA_001853355.1
Location
NW:214095-216429[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.016 12 5.7 0.0 3 31 424 456 422 461 0.84
2 2 1e-12 7.4e-10 38.3 0.2 3 41 557 599 555 603 0.91

Sequence Information

Coding Sequence
ATGCTGGAATTTGTGGAAATTAATTGCGATTTTGCATTTAGTCATAGAAATGTTGAACGCGTAGGCTTAGCATTTCTCAATTTAAATAGATACAACGCTATCACTGAAGAGGCGGCAGAGAGCAATGACGATGCGGTGGATAAGTTACCTGAAGAATTCGCGGTCGATGTGGACTATTTGAAATCCCTAGATCCCAAAGAATGGAAAGATCATGATCACTATGCAATACTTGGATTAGGTAAATTAAGATTTAATGCTACAGACGACGATATACGGCGTGCTTACAGACGTATGGTGCTAATGCATCACCCAGACAAGCGGAAAGCAAAAGGCGAAGAAGTAAACACTGATGAAGATTATTTTACTTGTATTACTAAAGCTTATGAAATACTTGGCACGTCGAAGACAAGGCGCGCTTACGACTCTGTTGATCCCGAGTTTGATGACTCTTTTCCGACTCAAGCAGAGATTGATAAAAACATTTACGaatgttttaataaatgttttgacTTAAATGCGCGTTGgagtgaaaagaaaaatgtgcCAAAATTCGGCGATGAAAATTCGAAACGTGAACACGTGGAAGAGTTCTATAGCTTTTGGTACGACTTTAAGTCTTGGCGGGAATTCAGTTATCTGGATGAAGAAGACAAAGAAAAAGGTCAAGATCGAGATGAAAGACGTTGgattgaaaaggaaaataaagcGCTacgtataaaaagaaaaaaggaagaAATGATGCGTATACGTGCATTAGTCGATTTAGCTTACAATAATGATAAACGtatacaaaagtttaaaaatgaggagaaagaaaaaaaattggctGCTAAACGAGCCAAAATGGACGCTGCACAGGCACAAAAGGCCGAACAAGAGCGTGCGCTACGGGAAGCACAGTTGGCGAAGGAGCGTGCTGAAAAAGCTGAACAAAAACGAATCGAGCAAATACGCATCGAGAAGGAACAAATGAAGAAGGTTCtgaaaaaggaaagaaagaCATTGCGCGACAGATTAAAAGAAGCCAAATACTATGGAAACAATGATAAAGAGACACTTAAAAATATGGAAGGTGTGGAAAAGATTTGTGAGATGTTCAATTTAACTGAATTGCAGGAACTTAACAAAGATATTGAAAAGAAGGGCCaaaatgctttttttgttgcattgaaAACGGTTGAAAAGAAAATAGCCGCCGAACTGGAAGAGCTCAATCAAACACAGCAAAAGAAAGTGACTAAGAATGAGAAAGAAGTGAAGAAGAATGATGTTTGGaacaatgaaaatatgcaaCTACTGATAAAATCTGTCAATTTGTTTCCAGCTGGCACATCACAGCGTTGGGATGTGATCGCTGCTTTTATAAACCAACACTCCACCGCTGGTGTGACAGTGACCGCGCGTGATGTTCTCAATAAAGCAAAAGCTATGCAAAATAGTGACTTCTCAAAAAGTTCTCTTAAAACACAAGCAAATGATACTGCattcgaaaatttcaataaatccaaAAAGGATGTACAGACTTGCAATGATATCACAGTCAATCAACCAGTTGTGAATAATGTTAACAATGTAGAGGCCAATGTAAGTACAAATGGTAACAAAGAGCCGAGTGATAATGATAAAACTGCTAACAAGGTATCGAACAAGTCAACAACCGTACCAAAAACGTGGACAAAAGAGGAGCAGGCGCTGCTAGAACAAGCCATTAAAACTTATCCAATCTCAACACCTGATCGCTGGGAGAGAATAGCTGAATGCATACCGAATAGAACCAAGAAAGATTGTTTGCGTCGTGTCAAAGAACTTGTGGAATTGGTGAATTCAAAAAAAGAGGCCCAACAATCGGTCAAATGA
Protein Sequence
MLEFVEINCDFAFSHRNVERVGLAFLNLNRYNAITEEAAESNDDAVDKLPEEFAVDVDYLKSLDPKEWKDHDHYAILGLGKLRFNATDDDIRRAYRRMVLMHHPDKRKAKGEEVNTDEDYFTCITKAYEILGTSKTRRAYDSVDPEFDDSFPTQAEIDKNIYECFNKCFDLNARWSEKKNVPKFGDENSKREHVEEFYSFWYDFKSWREFSYLDEEDKEKGQDRDERRWIEKENKALRIKRKKEEMMRIRALVDLAYNNDKRIQKFKNEEKEKKLAAKRAKMDAAQAQKAEQERALREAQLAKERAEKAEQKRIEQIRIEKEQMKKVLKKERKTLRDRLKEAKYYGNNDKETLKNMEGVEKICEMFNLTELQELNKDIEKKGQNAFFVALKTVEKKIAAELEELNQTQQKKVTKNEKEVKKNDVWNNENMQLLIKSVNLFPAGTSQRWDVIAAFINQHSTAGVTVTARDVLNKAKAMQNSDFSKSSLKTQANDTAFENFNKSKKDVQTCNDITVNQPVVNNVNNVEANVSTNGNKEPSDNDKTANKVSNKSTTVPKTWTKEEQALLEQAIKTYPISTPDRWERIAECIPNRTKKDCLRRVKELVELVNSKKEAQQSVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01357879;
90% Identity
iTF_00192022;
80% Identity
-