Blat003078.1
Basic Information
- Insect
- Bactrocera latifrons
- Gene Symbol
- retn
- Assembly
- GCA_001853355.1
- Location
- NW:1017100-1050245[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-26 4.3e-23 81.0 0.0 2 89 20 105 19 105 0.96 2 2 6 1.2e+04 -4.1 0.1 11 24 404 417 402 419 0.76
Sequence Information
- Coding Sequence
- ATGCTGATTTCAGAGGATCAAATTCAAGAGCTTTACGAGATCAACGATGATCCGAAAAGAAAAGAATTTCTGGATgacttattttcattcatgCAAAAGAGAGGCACACCCATCAATCGTTTACCGATAATGGCAAAATCCGTTTTGGACTTATATGAGCTATATAATTTGGTTATAGCGCGTGGCGGTCTTGTTGATGTTATCAACAAGAAATTGTGGCAGGAAATCATTAAGGGTCTACATTTGCCCTCAAGCATAACAAGTGCCGCATTCACATTGAGAACACAATACATGAAATATCTTTACCCCTACGAATGCGATAAGAAGAATCTGAGTACACCTTCCGAGCTGCAGGCGGCCATTGACGGCAATCGGCGCGAGGGCCGTCGCTCCAGTTATGGCCAATACGAGGCCATGCACGCTCAATTGCAAATGCCACAAATTGGACGTCCACAGTTGCCCGGCGGCATACAACAAATGTCGCCATTGGCGCTGGTCACACACGCCGCCAACAATCAGCAAGTGCAAGCAGCGGCTGCAGCCGCCGCCGCACACCACAGACTGATGGCGCCCTCCTTTGGACAAATGGGTCAAATGCCGAACTTGGTGACGCACGAATTGGAGCAGCGCATGGTGGAGTATATTAAATTGATGCAGGTGAAGAAGGAGCAACATAGCAACGCTGCTGCTGCGGCGGCGGTTGCGGCGGCAGCAGCGGCCGCTGGCAGCAATGTGGGTGGCGATGCAGCGACTTTGGCGCGTCTTGGAGCGACTGGCAGTAGTAATGGTGCGCACgtcaaacaacaacagcgtcaaCGTTCAACAAGTCCAGAGGCCGTTGCTCATGAGGCGATGAACGCTTTGGACATTTCACGCGTCGCGCTTTGGCAAATGTATCACAACAACACCAGCCCGCCAGTATCGATGAACGCCTCACCACAGGGAAGTGGAGCGGGGATTATCGGCGGAGTAAACACAATGAGCGTGCCAAGCTTAAACGAACAAAACAGTGAGGCTCTCAACCTTTCCGACTCACCGCCAAACATTAACAACATCAAACGCGAACGCGAACACGAACAATCGCCCGAACCGTGTGATCGCGACGATTTCCATAATCAATCGCCGCCGGTGAAACGTAGCGCACTGAATTTTCCAGCTGGTTTCTATTTACCGTCGAGTATGGCCGCAGCAGCCGCCGCGGCTGCCGCCAATTTCCACCAACAAAACAATAAGAGCAACAATCATCTGCCACAAGACTCCGATGGTGAGGACGGTGAGGATGGCGATGATGACACCGATACGcacaacaccaccaacaactcAATGACACAAGACGTAGAGTCCAATCGCCCCGCGTTAAATGGTCACCATCATCAGCATCTGCATCATCATCTGCAGCAACTTCATCACTTGCCACACAACCTACAAATGCCGCATCATCAACATCTCGTCAAGAACGCCAGCGGCAATCAGGACAAGTCTGACGATTCAGCCCTTGAAAATTCTCCCTCGACTAGTGCGACTTCGACCGCTGGCGTAGGTGCTGACAGCAGCAATGGCAACAATGCTTGTGGTGACAATGTTAGCGGTCACATTTCACCGGTATCCACAAAGAAGAAACACCTGCCGAACCAGCATAACAATGGTGGCTCAACGGCCATGGATTGTAGCAGTAGTGGCGCCGGGCGTGCACAATCAAATAGCCCCAGTTTAGGTGGCGTCGAGGATGCGTTGAATCTGTTGTCGGGCATGCAATTTCGTGTGTCACGTAACGGCACCAACGCTAATGGCGCACAACAGCTGGTCGTTAATCTCGAATTGAATGGCGTGAACTATTCGGGTGTGCTTATTGCCAATACCACTAGCAATTCCAATGACGCATCACGCTCAAGTGTAAACCCTTTGCAAAGGATAAACGAAGACGATGAAAATAACGATTTGGTGGATCCGACAGCAGAGGAAGCCAAAAATGTGAGCGGCAGCGGTACAAGCGGTGCTGATGGTGACATCGAAGATGAGGACATGGCCGATTTAGCTAGCACAACAAGCAACGACGAAACTACACCCAGAAATATGAGCAAAAATGATGGCAACGGTTTGTCGGTCAACACGGCCAATAAGAGTGCGCTAAATGAGAGTAACGTAAATGATGCCGTTATGACGGCGTCTTAG
- Protein Sequence
- MLISEDQIQELYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECDKKNLSTPSELQAAIDGNRREGRRSSYGQYEAMHAQLQMPQIGRPQLPGGIQQMSPLALVTHAANNQQVQAAAAAAAAHHRLMAPSFGQMGQMPNLVTHELEQRMVEYIKLMQVKKEQHSNAAAAAAVAAAAAAAGSNVGGDAATLARLGATGSSNGAHVKQQQRQRSTSPEAVAHEAMNALDISRVALWQMYHNNTSPPVSMNASPQGSGAGIIGGVNTMSVPSLNEQNSEALNLSDSPPNINNIKREREHEQSPEPCDRDDFHNQSPPVKRSALNFPAGFYLPSSMAAAAAAAAANFHQQNNKSNNHLPQDSDGEDGEDGDDDTDTHNTTNNSMTQDVESNRPALNGHHHQHLHHHLQQLHHLPHNLQMPHHQHLVKNASGNQDKSDDSALENSPSTSATSTAGVGADSSNGNNACGDNVSGHISPVSTKKKHLPNQHNNGGSTAMDCSSSGAGRAQSNSPSLGGVEDALNLLSGMQFRVSRNGTNANGAQQLVVNLELNGVNYSGVLIANTTSNSNDASRSSVNPLQRINEDDENNDLVDPTAEEAKNVSGSGTSGADGDIEDEDMADLASTTSNDETTPRNMSKNDGNGLSVNTANKSALNESNVNDAVMTAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01563473;
- 90% Identity
- -
- 80% Identity
- -