Basic Information

Insect: Bactrocera dorsalis
Gene Symbol: GLIS3
Assembly: GCA_000789215.2
Location: NW:3109274-3124210[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.02 1.1 9.3 0.1 3 23 739 762 738 762 0.90

2 5 0.28 16 5.7 0.4 1 23 771 798 771 798 0.88

3 5 3.8e-06 0.00022 21.0 0.8 2 23 805 828 805 828 0.96

4 5 0.0014 0.077 13.0 0.6 3 23 836 858 834 858 0.92

5 5 6.4e-05 0.0036 17.2 0.4 1 23 864 888 864 888 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.02	1.1	9.3	0.1	3	23	739	762	738	762	0.90
2	5	0.28	16	5.7	0.4	1	23	771	798	771	798	0.88
3	5	3.8e-06	0.00022	21.0	0.8	2	23	805	828	805	828	0.96
4	5	0.0014	0.077	13.0	0.6	3	23	836	858	834	858	0.92
5	5	6.4e-05	0.0036	17.2	0.4	1	23	864	888	864	888	0.95

Sequence Information

Coding Sequence: ATGTCTGCCACCGTTAAAGTGAGTACACCAAGTCTCAGCATATCACCGTTAACTGCCGTCAAGGTGTCATTTCCCAGTGAAACGCCAACtaacaaagacaacaacagtAGTAGAAGCAACAAACTTAAAAGTGTCAGTCATACCACAATGTTGCCACAAATTAAATTGCCACCAGCTTCACCGCTATATTCACCACTTTATCCAGCCATGGATGCCGTAGCATCTACACCTAATCATTATGctaatagcagcaacaacaacatcagcagtgGCAATAACTGTGCGCTACTGATGTCACCGCCGCTCAGCGCCAAGACTGAGCAGGATAACTACCAAGaatcacaacagcaacaacaacaacatctcaGCCTACCGCAACAACAGCATGGCGTTGACTTTCTTGCACCGAACTGTAATTTGAAAGCGGCTTACGGCAGCAACAGTCACAGCTACACAGACTTCACCAGCGCCGAGTTGAGCTTTCCGGATTTTTCGCTCAGTTACATGGTTGAGACGCCCACATCGGTTTATGGcagttgcaacagcaacaacaacactgtcgATTGCACAACTGGCAATCATTGTGGCAACGACGCTTCGACTAATGTGAGCTTTTGCTGTGCTGACAGCGATGAGgtcatgttgcaacaacagcaacaacagagcCGACAAAAGCCGACTGCTTGCCAGATTGGTAGCAGCAGCAACGCCCAGGATGTGTTTCGTTTCGAGCCGGAGGATATAGCACGTCTAATATCGGCAGATTGTGAGACAAGCTGCAGCTTTGTGAACTCACCTACAAATGCGGGTTCAGCAATGCCGCAAGGTGGCGGCTTGTCGATGACAAATACCTTACAAGCGTCTTTTTCGCCACGCACACCCTACAGCCCCTACGCTACAGCGACGAGCTACGCACCGTGTAGTGTGCCTCCCTCGCCAGGCATGCTGGGTGGCATGCAGCTGGTGGATGGCAATTATCAGtcactacagcaacaacaacagcagcaacagcaacaaccaatgCAGCAGCAAATATCAGCAGCGGTGTTTGGCGGCGTTGAGAGCAATTgcagtaacagcaacagcagttgtGACCTCGGTGACGGTAGTCAAATGTTGGTCGCCGGCACTGTGACCACTGACTGTTTGAACTTGGACATCGAGTACTACAACTATGATGAAATCAATTGTCAATCGAAAAATCAGTCGCCATGCTCCTCGCCGCCGCTCGATCCCTGGATGACATTAAATCTAGCGGATACAATTGCGAACGCCGCAGCGGCAGAGACGGCGGCAGCGCAAGCACAATTGAAACACTCACCGAAACTTAGTAACACCAGCTATGCTGGCTATCAGTCGTACGAGGCGCAGTACATGCCGTCACTTACGTCGGAGATTAAACAAGAGTCCTCGACCATTAAGCTGCCCTCGATGATGTCCACCTTTGGCACGCCCAAATATGAGTCTGTCTACAACTATGACTATGCCTTTGGGCATGAGGAGCTCACCACACAGCCGCAACAGTGTGAGTACCAatgtcagcagcaacaacagcaacagcaagcgcAAGAGCGATGGTTGCCATACGATGCCACCGCCATGCCAGTTGCTGCGGCTGCCGTACACAATTACGATCATTTGCCCGAGAACTATCAAAACTGCAATTTGTTGCATGCGGAAAAACCGAATCGTGAACACAAAATCATTTGGACCATCGACGAGCTGGACGAGATGCATGAGGAGCTCATCGATGAGCTCTGCTCGGCCAGCACTAAACAATCGAATCACATGAGCGGCGATGAGGATGTCGATGTGGACATTGCCGGCTATTTCGAGGAGGAGAACTCACTCGATTTCGCCCTACAGGTGGCGGCAAGCAACGAGCGTGCTTTCGATGATGCAAATGAGGATGATAACGATTCTGTGTTTCACATTAGTGACAGTGCCGTCGTCAATTCGAACACCAAcacaaataacagcaacaataaaaaccaattaGAACAACACGGCACACAGCCGACGCGCCGTCGACGTCGCTACACTTCACCAGCCGTGAACGGCAGTGGAGCGGGCGCAAAGAAATCCACTTGTCACGGCAGCGCCATCGATATTGACGCGAGTTATGGTGCACATACCCGTGGCGTTGTGGCGCGGCAAGAAAAACAAGTGGCGGACTTAGAGCACATGGATGCCTATGCCGATGAGGCGCAAATTTGCCGTTGGACCGATTGTAATGAGGAATTTCCCAACCAGGCTGAATTTGTGGCACACATCGAGAAACGACATGTGGATGCGAAAAAGCGTGAAGATTTCTCCTGCTTTTGGTTGGACTGTCCGCGCCGTTATAAGCCCTTCAATGCACGCTACAAGCTCTTGATACACATGCGTGTGCATAGCGGTGAGAAGCCGAACAAGTGTCCGTTCCCTACTTGCAACAAGGCTTTCTCACGTTTAGAGAATTTGAAGATCCATCAGCGCTCGCATACCGGCGAGCGTCCGTACGGCTGTCAGTATAGCGGTTGCCTGAAAGCTTTCAGCAACAGTTCGGATCGTGCCAAACACCAGCGGACCCACTATGATACGAAACCCTACGCCTGTCAACTGGCCGGCTGCACGAAACGCTACACCGATCCATCGAGCCTGCGTAAGCATGTGAAAAATCACGCGCTCCGCAATGCCAACGGTCATTTGGCACGGCGAAAGTCGGCGAGCGCGGCCAGTGCCGGAGGCGGCAGCAAAAAacccaccaacaacaataacaatggccAAATGACAACAGCGAAAATGCGCCGACATTCCGAATCATCGCTGGCGCATGCAACAGTGCAAATAACCGGAGGCGAGACATTAGAGgcgcaaacagcaacaacaatagcaactttAGCaaacgccacaacaacaacaacatcgacaaAAGCATTAGCGCAAACGACACTAATTGGCAgcaaattaatgaataataCACAGAGTCAGATGCAAAGTCAGAGTCAGCAGTCGGTGCAACAAACAAGACAGCAGCGCAGCAATAGTTGCAGTGAGATgtcaacaaattacaacaacaacaagaacaattgTAACAATAAGCTGTCTCATTATGATAATCACGATGAGTtgatgacaacagcaacaacaactgcggtGGAGCACACACCATTATTGGCAACACCAACAGctacaatgccaacaacaacaacaacagcagcggcattAGCGCCCATGTACAAAGCAGCAACAGCCATGTCATATACGATGCGGCAACATGCCAATAATGCGTCGTCGGGCGTCAACAGCGACATGGCCACAATATTTGTTGCCACGACTAATACCGGCggtggcaaaaacaacaacagtaatggcaatggcaatgaACAACAGCAACCCGACTACGCCACAAATGGCAGCAAAAGCAATTCGATGAACTTTAATGAGTTGTCAAATTGCATTGTAACCATCGAACACAATCAAAATGAGAATTCAATTGATTGCAgtgacgacaacaacagcaacagcaacagccacagCATTAGCCACTGCGACAACAATGAAGCCATTAGCAAGCCCCCCGGCGCAGCGCGTGTGGCATATGGCATGCGACAGCCGGACGCGAACACACAGGAAATGGATACGTTGAGTGTGTGCAGCAATAGCAGTAGTCGTAGCGGCGTCtgcagtgacaacaacaatagcaactgcAGTTGTAGCAGCAATAATGAACACATCAATCAATTAAATGAACTTGGTCAATTTTTGGTATTAAGCCCGAAGGCCACGCACAACAGCAGCGCCGACGTCGGCAAACAGTCAATAGCGTGtgcaacagctgcaacaacagcgcATGCCGTTGCATGGCACACACCAACTAATTGCAACAAATATATGGATCATACAAATACCGCTAATATAACGGCTATTAGCAACATTAGCGCGGATATGGCGCAATCCACAACTGTGGAGGCACGCACAACGGCCTCTGCGGCGGCGGTGGCGTCGATAGCGGCAACGGCAGCTTGTAAGCATATTAACAGCAAAGCCCCACCGCCGCCACTGCAAGAGTTCGTCTCGTTCGAGTATGTGAAGCGCATGTTGGCCGAAACATTCGAGCCGGAGCCCACCGCTTTCCCCAGCGCCAGTCCCGGCGGTAATGCTGCGTACATGGCAGCCAATCAGCCGACACTGAAGGCCGCAAATAATACGGCCGGCGAAGAGGCTGCGCGCGCGGCACAAGCCATTAGCGCAAATAAACAATGCAACGCGGCGTTGGCGCAAACGGCTAATGGACAAAATACCGACGCGGCTAAAAGCACTTGTGACGGCGCGCAGACAAACCGTGGCAATggtaatagcaacaacaacgagaacGGCAGCGCAGCCAATGCCGGATCGgattatgcaaataatttcgaaatggaTTATTTGCAGAGTTTCATGTAG
Protein Sequence: MSATVKVSTPSLSISPLTAVKVSFPSETPTNKDNNSSRSNKLKSVSHTTMLPQIKLPPASPLYSPLYPAMDAVASTPNHYANSSNNNISSGNNCALLMSPPLSAKTEQDNYQESQQQQQQHLSLPQQQHGVDFLAPNCNLKAAYGSNSHSYTDFTSAELSFPDFSLSYMVETPTSVYGSCNSNNNTVDCTTGNHCGNDASTNVSFCCADSDEVMLQQQQQQSRQKPTACQIGSSSNAQDVFRFEPEDIARLISADCETSCSFVNSPTNAGSAMPQGGGLSMTNTLQASFSPRTPYSPYATATSYAPCSVPPSPGMLGGMQLVDGNYQSLQQQQQQQQQQPMQQQISAAVFGGVESNCSNSNSSCDLGDGSQMLVAGTVTTDCLNLDIEYYNYDEINCQSKNQSPCSSPPLDPWMTLNLADTIANAAAAETAAAQAQLKHSPKLSNTSYAGYQSYEAQYMPSLTSEIKQESSTIKLPSMMSTFGTPKYESVYNYDYAFGHEELTTQPQQCEYQCQQQQQQQQAQERWLPYDATAMPVAAAAVHNYDHLPENYQNCNLLHAEKPNREHKIIWTIDELDEMHEELIDELCSASTKQSNHMSGDEDVDVDIAGYFEEENSLDFALQVAASNERAFDDANEDDNDSVFHISDSAVVNSNTNTNNSNNKNQLEQHGTQPTRRRRRYTSPAVNGSGAGAKKSTCHGSAIDIDASYGAHTRGVVARQEKQVADLEHMDAYADEAQICRWTDCNEEFPNQAEFVAHIEKRHVDAKKREDFSCFWLDCPRRYKPFNARYKLLIHMRVHSGEKPNKCPFPTCNKAFSRLENLKIHQRSHTGERPYGCQYSGCLKAFSNSSDRAKHQRTHYDTKPYACQLAGCTKRYTDPSSLRKHVKNHALRNANGHLARRKSASAASAGGGSKKPTNNNNNGQMTTAKMRRHSESSLAHATVQITGGETLEAQTATTIATLANATTTTTSTKALAQTTLIGSKLMNNTQSQMQSQSQQSVQQTRQQRSNSCSEMSTNYNNNKNNCNNKLSHYDNHDELMTTATTTAVEHTPLLATPTATMPTTTTTAAALAPMYKAATAMSYTMRQHANNASSGVNSDMATIFVATTNTGGGKNNNSNGNGNEQQQPDYATNGSKSNSMNFNELSNCIVTIEHNQNENSIDCSDDNNSNSNSHSISHCDNNEAISKPPGAARVAYGMRQPDANTQEMDTLSVCSNSSSRSGVCSDNNNSNCSCSSNNEHINQLNELGQFLVLSPKATHNSSADVGKQSIACATAATTAHAVAWHTPTNCNKYMDHTNTANITAISNISADMAQSTTVEARTTASAAAVASIAATAACKHINSKAPPPPLQEFVSFEYVKRMLAETFEPEPTAFPSASPGGNAAYMAANQPTLKAANNTAGEEAARAAQAISANKQCNAALAQTANGQNTDAAKSTCDGAQTNRGNGNSNNNENGSAANAGSDYANNFEMDYLQSFM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00193913;
90% Identity: iTF_00191664;
80% Identity: -