Basic Information

Insect: Bactrocera dorsalis
Gene Symbol: salm
Assembly: GCA_000789215.2
Location: NW:828946-858879[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 4.4e-06 0.00025 20.8 0.9 1 23 624 646 624 646 0.98

2 7 8.8e-06 0.0005 19.9 2.1 1 23 652 674 652 674 0.98

3 7 0.015 0.84 9.7 1.5 2 23 1040 1061 1039 1061 0.98

4 7 6.3e-08 3.6e-06 26.6 0.5 1 23 1067 1089 1067 1089 0.98

5 7 0.00019 0.011 15.7 2.3 1 23 1099 1121 1099 1121 0.98

6 7 0.032 1.8 8.7 3.1 2 23 1566 1587 1565 1587 0.97

7 7 0.045 2.5 8.2 0.9 1 13 1593 1605 1593 1606 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	4.4e-06	0.00025	20.8	0.9	1	23	624	646	624	646	0.98
2	7	8.8e-06	0.0005	19.9	2.1	1	23	652	674	652	674	0.98
3	7	0.015	0.84	9.7	1.5	2	23	1040	1061	1039	1061	0.98
4	7	6.3e-08	3.6e-06	26.6	0.5	1	23	1067	1089	1067	1089	0.98
5	7	0.00019	0.011	15.7	2.3	1	23	1099	1121	1099	1121	0.98
6	7	0.032	1.8	8.7	3.1	2	23	1566	1587	1565	1587	0.97
7	7	0.045	2.5	8.2	0.9	1	13	1593	1605	1593	1606	0.94

Sequence Information

Coding Sequence: atgaaaaatcataTATCAACTGTTCTGTGTGAAATGCGTAGTGATTTCAAAGATAATCatcaagaaacaattaataaaatgataCAATTTGGCACCGTTAAATATGGTATCGTCAAACAATTGAAAGACCGTGCGCACAGCGTGGAGAAAGATGAGTCCAGCGATCAGGAGGAGAATGGTGCTTGCTGCTCGCCCATTGCCAGTCAAGACGTGGCGAGCAATACCGAAACGACAGCAACAAGTGCCGCAgtagcggcaacaacagcaatgcccACAGTTATGCTGGCAACGCCGGCACACAGCGCAATTGGCAATGATTTGTCCGTTGCGGCACAAGTGCAAGATCGCACACAAAGCGCAGCGGATGCGCTTGAACAAagtacaacaccaacaacaatgagcGAGGCGACCGAAGATCACAATCacaacaacactagcaacaGCAATAATGCTATGTCCGGTGTATCACCGACGCGTCTGGAGCAAGCGCGCGGTTCAACACCCGTGGAGCGCCTACTACAATTGAAACAACTTAGCGATGCGGCCGCGTCGGCGATGGTGGAAGCGAGCGCAGCGTCGGCAATTAGCGCTGCCGGCACACCAACATACAATACATATCCGCTAGATAGTGCTGGTATTGTggctaacaataacaaatttggTGCGCCCACACCAATGGATACCGAAGAGACGGAGGAAAGTACGCTTTATGCATCGGCTGGCACGATGGCAAAGCAGCGCGCCACACTACCAGAGGTAGACGATAAGGAAGTGGAAGAGGATGGTGATGAAGATGAAGATCAACAAACTGCCGAAGCGTTGGCTGTAAAGCAGCGTGCCGAGGAATTAGCGGCGGCTAGCGCAGCGCTTACAAATGCCAACAGTATGGATGTTAGTAATGGCGCGGTCACCAGCGAAGCAGATGACATTGCAAAGAGCACTACCGCCGCGCTTACGCCCACAGCGAGCGCGCTTGCAGCCGCGGCCGGTTTGCCACaagctgctgccgccgccgctttCGGCGCTGCGCCGGTCAATCTGGAAGCcatacaaaatatgcaaatggcTATCGCGCAATTCGCCGCCAAGACGATAGCGAATGGCGCACAGGGTGGCGATAATGATGCGGCTATGAAACAGTTGGCTTTCTTGCAGCAAGCGCTGTTCaatttgcagcaacaacaactctttCAAATACAACTCATTCAACAATTGCAATCGCAATTGGCCATGAATCAGTCGAAAGGCGCGAGTGATGGTGAAGTTGGCGACGGCGATGAGTTGGAGGAAGAGCGCGAAGACGGCGAAGAGGATACATACGAAGAGGAGGAACGCATTGCGGAAATGGAGTTGCGCCAGAAGGCGGAGGCGCGCATGGCCGAGGCTAAAGCGCGTCAACATCTCATCAATGCTGGTGTGCCGCTGCGCGATGAAGCTGCCAACGGCGCACAGGCAACCAGTTCAGCTGACACCAGCGGTAGCGCGCTAAACGCTACAGAGTCACTCAAGCGCAAGCGCGAAGATGACACTGATGCTTTTGAGGCTGTGGCCAGCAGGCGCATGAGTGTTGAGGCATCACATCTCAGCGCTACACGCGCGAGTGCGCAAATACCCAGCGGTATGGATGCGTTGAGTAAGCTGaaggaaatggaaaatatgCCACTGCCCTATGGTACTGATCTCGCCTCGAGCATAATTACCAATCACGATGATCTGCCCGAGCCCAATTCGCTGGAGATGCTGCAAAAGCGCGCCCAAGAGGTGCTAGACTCCGCCTCGCAGGGCATACTTGCCAACAATATGGCTGACGAGTTTGCGTTCAGGGACAAGAACGGCGATGGTAAGAATCGCAATGAACCGTTCTTTAAGCATCGCTGCCGCTACTGTGGCAAGGTGTTCGGCTCCGATTCAGcgctacaaatacacatacgcTCACATACGGGCGAGCGGCCATTCAAGTGCAATGTCTGCGGCAGTCGTTTCACCACCAAAGGCAATCTGAAGGTGCACTTTCAGCGGCACGCGCACAAGTTCCCGCATGTGCCAATGAATGCCACACCGATACCCGAGCATTTGGACAAATTTCACCCACCGCTGTTGGACCAAATGTCGCCGGACAGCTCGCCCTCACACACACCGGCTGCGCTGCCACAGCAAATGCCCCAACAACAGCTGCCGCCTGTGTCGTTGCCGCTACCCTTTCCACCAAGCGCCGCCTTCCCTGGCCTAACCGGACTTTATCGACCACCAATGGAGCTGTTGAAGTCACTAGGTAACGTCGGCTTTCCAAATCCATTCTTTCCGCAAATGTCTAATGCCGTTAGTGAGTCACGCGCTGAAGCGCCTGCGGCACAGACCGCAGCCAAAGAACATAATCAAGACTTGCCTACCGATTTGCGTAAGTCGTCGGCATCCAACTCACCGGAGTTGACAGTAGTGAAGACTGAAATCACGGACGAGAAAGAAGAAGACGAAACAGTCAAACAAACGACGGAAGTCGCGCAACCTGCAGAAACTGCGGCGGTTGTAGCCGCAACGGAGGACACCACACCAACACtggctataaaaattaaagaagaacgCATCGACACGGATTCACAAGATGAAGAGCTGGAACGTGCGGAAACACCAAACGCACAGTTGACACCATCACCGGCGCGCGCAAATGCCGCAACGCCGACACAGACGTCCGCCAGCGCGCCTTTCACACCACCAACACCCACCTCAAAGTCAttggcgttgccacctgttgtgCAGCCAGCGCAGCCGCCTATCACCATGCATCCTCATCCGTCACCCGGCTTGAACAATCATTTCGATCACTTACCCACACCGGGTCAGTTGCCGCCATCTTTGCATCATCGCGACGACTTCTTTGCGGAGCGTTTTCCGCTGAACTTTACCAAAAATCTCTCACCAGAGCACCACTCGCCCATACGTTCGCCTGCGCATCTGCAGCGCTCGCCATTCTTCAATCCAATCAAACATGAGATGGCACTGCTGCCACGCCCACACAGCAATGACAACTCGTGGGAGAATTTCATTGAGGTTTCGAATACTTCGGAGACGCTGAAATTGAAGGAACTCATGAAGAACAAGAAATTGACTGACCCAAACCAATGCGTCGTATGTGATCGTGTGCTGTCGTGTAAGAGCGCCTTGCAGATGCATTACCGCACACACACTGGCGAGCGGCCCTTCAAGTGCCGCATTTGTGGACGCGCTTTCACTACGAAAGGCAACCTAAAGACTCATATGGCTGTGCATAAGATACGGCCACCCATGCGCAACTTCCATCAATGTCCTGTTTGTCATAAGAAGTACTCGAACGCGCTGGTCTTGCAGCAGCACATACGTCTGCATACCGGCGAGCCAACCGATTTGACACCCGAACAGATACAAGCTGCCGAAATACGTGATCCACCGCCATCGATGATGCCGGGCGCGTTTATGAATCCCTTCGCAGCGGCGGCTTTCCACTTCGGTGCCATGCCAGGCGCCGGCGCTGCCATGGGTCACCTAGGACCACACAACGGACTGGGTTCGGAGTCTTCGCAAGGCGATATGGATGAAAATATCGATTGCGGCGATGACTATGACGATGACATGTCATCTGAACACATGTCCAGCGCGCACGACTTGGATGTGAGCGATCGGCCGCGTTCCAGCGATGACTTCAAAGGTCTACTCTTCGAGCAAAAGCTACGCATCGATGCTACTGGCGTCGTGAATACCACACCACGTCCGCATTCGACGACCAGCAATGCAAATTCCGTTAACTCAGCGCCAACCAGTCCCAGCTCTGCGCCACGTCACTGTTCCACGCGTACCAGTTCACCCGCGCGCTCCATTTCTGAGGCGTCGCAAGGCGCACTCGATCTCACGCCACGCGCCATGCCCACGCACGCCAAAAGTAGCTCCCACTCACCGGCACCGACGTCGGCAGCGCCTGCAAGTGGTCGCAAGTCGCCCACCTCGCCGTCGCAGCGCAACAGTAGCGCCAACAGCAGCATCACCAGAAGTCCAAATCCAACGTCCATACAAAAGCCACAAACGAGTCCCGCTGCTACGCTCACCTCGCCATTGGTGCCAACATCAGCAGTTGACTTGCCACCAGTCCTGCATCATCActtgcaacagcagcatcagcagCTGATGCAACAGCAAGCGGTCGCGGCGGCAGCAGCGCATGCCCAAGCGCAAGCgcaacatcatcatcagcaaTTGCAACAGCATGCCGTCGCTATGCATGCCGAGCAGTTGCGTCGCGAACATCAAATCAAACAGGAGCATGCGGCACATCAGCATCAACTGCGTCAACACcaccaccagcagcagcagcaacaacagcaagacaCGCATGCGTCGGCACATTCACCGCATCAGCTGCCATTGCCGCCGTCGCCGCATCTGGCGCATCAcctgcaacagcaacaccagcaagccgcggcggcagcagcagcagccgcagcagcgcaacaacaacaaccaaccgGCGCTATGCCACCACAAGGCCCACAACCACCGAATCCATTGGTCGCGGCGCGTCCACCGTTCGGCATGTTTCCGAACCTGCCACTCTTCCCGCCAGCCACCGCGCAAACGATGTGCTCTGCTATGAATACGATTGCGCAATCGGTAATGCCGGCGGCACCGTTCAATCCACTTGCACTTTCCGGCGTGCGTGGCAGCACCACCTGCGGCATCTGTTTCAAAACATTCCCCTGTCACTCAGCTCTAGAAATACACTATCGCAGCCACACCAAGGAGCGACCGTTCAAGTGTACCATCTGTGATCGCGGTTTTACCACAAAGATGA
Protein Sequence: MKNHISTVLCEMRSDFKDNHQETINKMIQFGTVKYGIVKQLKDRAHSVEKDESSDQEENGACCSPIASQDVASNTETTATSAAVAATTAMPTVMLATPAHSAIGNDLSVAAQVQDRTQSAADALEQSTTPTTMSEATEDHNHNNTSNSNNAMSGVSPTRLEQARGSTPVERLLQLKQLSDAAASAMVEASAASAISAAGTPTYNTYPLDSAGIVANNNKFGAPTPMDTEETEESTLYASAGTMAKQRATLPEVDDKEVEEDGDEDEDQQTAEALAVKQRAEELAAASAALTNANSMDVSNGAVTSEADDIAKSTTAALTPTASALAAAAGLPQAAAAAAFGAAPVNLEAIQNMQMAIAQFAAKTIANGAQGGDNDAAMKQLAFLQQALFNLQQQQLFQIQLIQQLQSQLAMNQSKGASDGEVGDGDELEEEREDGEEDTYEEEERIAEMELRQKAEARMAEAKARQHLINAGVPLRDEAANGAQATSSADTSGSALNATESLKRKREDDTDAFEAVASRRMSVEASHLSATRASAQIPSGMDALSKLKEMENMPLPYGTDLASSIITNHDDLPEPNSLEMLQKRAQEVLDSASQGILANNMADEFAFRDKNGDGKNRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAHKFPHVPMNATPIPEHLDKFHPPLLDQMSPDSSPSHTPAALPQQMPQQQLPPVSLPLPFPPSAAFPGLTGLYRPPMELLKSLGNVGFPNPFFPQMSNAVSESRAEAPAAQTAAKEHNQDLPTDLRKSSASNSPELTVVKTEITDEKEEDETVKQTTEVAQPAETAAVVAATEDTTPTLAIKIKEERIDTDSQDEELERAETPNAQLTPSPARANAATPTQTSASAPFTPPTPTSKSLALPPVVQPAQPPITMHPHPSPGLNNHFDHLPTPGQLPPSLHHRDDFFAERFPLNFTKNLSPEHHSPIRSPAHLQRSPFFNPIKHEMALLPRPHSNDNSWENFIEVSNTSETLKLKELMKNKKLTDPNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPPSMMPGAFMNPFAAAAFHFGAMPGAGAAMGHLGPHNGLGSESSQGDMDENIDCGDDYDDDMSSEHMSSAHDLDVSDRPRSSDDFKGLLFEQKLRIDATGVVNTTPRPHSTTSNANSVNSAPTSPSSAPRHCSTRTSSPARSISEASQGALDLTPRAMPTHAKSSSHSPAPTSAAPASGRKSPTSPSQRNSSANSSITRSPNPTSIQKPQTSPAATLTSPLVPTSAVDLPPVLHHHLQQQHQQLMQQQAVAAAAAHAQAQAQHHHQQLQQHAVAMHAEQLRREHQIKQEHAAHQHQLRQHHHQQQQQQQQDTHASAHSPHQLPLPPSPHLAHHLQQQHQQAAAAAAAAAAAQQQQPTGAMPPQGPQPPNPLVAARPPFGMFPNLPLFPPATAQTMCSAMNTIAQSVMPAAPFNPLALSGVRGSTTCGICFKTFPCHSALEIHYRSHTKERPFKCTICDRGFTTKM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01564050;
90% Identity: iTF_00193847;
80% Identity: -