Basic Information

Insect: Bactrocera dorsalis
Gene Symbol: zfh1
Assembly: GCA_000789215.2
Location: NW:532824-597488[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 5 2.8e+02 1.8 0.1 2 10 75 83 74 92 0.78

2 9 0.0062 0.35 10.9 0.7 1 23 395 417 395 417 0.92

3 9 4.2e-05 0.0024 17.7 1.7 2 23 429 450 428 450 0.97

4 9 1.2e-05 0.00067 19.5 6.4 1 23 459 481 459 481 0.99

5 9 0.00045 0.026 14.5 1.0 3 21 489 507 487 508 0.94

6 9 0.0094 0.53 10.3 0.7 2 21 854 873 853 874 0.92

7 9 1.5e-05 0.00087 19.1 0.5 1 23 1283 1305 1283 1305 0.94

8 9 3.5e-05 0.002 18.0 6.8 1 23 1311 1333 1311 1333 0.98

9 9 0.0021 0.12 12.4 5.2 1 21 1339 1359 1339 1360 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	5	2.8e+02	1.8	0.1	2	10	75	83	74	92	0.78
2	9	0.0062	0.35	10.9	0.7	1	23	395	417	395	417	0.92
3	9	4.2e-05	0.0024	17.7	1.7	2	23	429	450	428	450	0.97
4	9	1.2e-05	0.00067	19.5	6.4	1	23	459	481	459	481	0.99
5	9	0.00045	0.026	14.5	1.0	3	21	489	507	487	508	0.94
6	9	0.0094	0.53	10.3	0.7	2	21	854	873	853	874	0.92
7	9	1.5e-05	0.00087	19.1	0.5	1	23	1283	1305	1283	1305	0.94
8	9	3.5e-05	0.002	18.0	6.8	1	23	1311	1333	1311	1333	0.98
9	9	0.0021	0.12	12.4	5.2	1	21	1339	1359	1339	1360	0.96

Sequence Information

Coding Sequence: ATGTTGTCTTGTCTGGTGCCGTCGTCATCACGTTTTGGCCAAGAGGATAATATAATAAACCAAAGTATGCCATCATCACCAGCGTTCGCCGTGCAATTTCCCTCATTGGCATCCAGTTTACACCATCCACTCCACCAAAACAGTTCGAAAAGCAGCAGTAACGCTGAGGAGGAGAACACCTCCATGCCGGGTCCGATTTCACCACACACAGATTTTATGGTGAAATGCCCACAATGCCCCAAGCGACTAGGGTTTCAGTCTCTGAGCGAGCACATCGCCTGCGAACATCCACATGAGACACTTAATGCAGAACATGTTCCATCCAGTCTTGCCTACCATCACCGCAACCACCACCATCAGCTACACAACCACCAACAACACCTTCACCAACTCCAACAATCCTACGCACAAGATAGCATCGTCGATATTGACGACGATAACGAGGATAACGACGACAACAGCAgtaacagcaatagcaacagcagcaatataAAGTTTACAAGTTCACCAAACCAatatagtaataacaacaacgatagcaatataaaaaacaataacaatagtatTACAAATATTGAATACGAGCGTCGTTCACCGGCAACACCGGGCGCTACCAACCACAGCTCCAACAACACCGCGCTCAACAGCGCCAACTCACCCAATACCAAgccaagcaaacaacaacaacagcaaacaaatatgATACCAAACGTCACGCCCACCGTCTCGCCCACACCACCGAACGATCTCAGCGCTGCCACATCGCCATTCGCCGCAGCGGCGgccgcggcagcagcagcagcagccgctgCACAACACCAACTACCGCCTTTACCGCCACatctcacacatacacatggcaTGCATCCTCATCTGCCGGCTGCGGCACAACTAATGGCCGCCATGGCCGCTATGCAAGCGCAACAGCAAAATGGTGCGAACAACGGCATACATAACGGCAGTATAGGAGCTGGTGGAGGTGGCGTCGGTGTGGCCTCCAATCCAACTGCACGCACTTCACCTACCAGCCAGTTGCTAGCCTTGGCCAACAACGGTCATCATGCGGCGGCGCATGCGCTAGCGGGCAGCCACAacggcggtggtggcggcagCGTCTACGACATGGACGCGGCACGCTCAACCTCAAGTCCCGGTTCGATCGGCGGCAGCGAAATGGGCGCCTACCACTGCGTACAATGCCCGGCGACATTCCAGACGCGCGAACAGCTGGAGAAGCACGAGGTGCTGCATTCGCCCAGTGCGCAGACGCAAACGTCAAACCAAAGCTGCAAGATATGCCACAAAGCCTTCGCCAATGTGTATCGCTTACAGCGTCACATGATCAGCCACGACGAGTCCGCACTGCTGCGCAAATTCAAGTGCAATCAGTGCGACAAGGCCTTCAAATTCAAGCATCACCTCAAGGAGCATGTGCGCATCCATTCGGGTGAGAAGCCGTTCGGTTGCGACAATTGCGGCAAGAGATTCTCACATTCCGGTTCCTACTCCTCACACATGACCTCAAAGAAATGCATCAGTATGGGCATGAAATTGAACCCGAATCGCGCTATGCTGAAAGCGCTGGAAAAGAATGCTCCGGGTCAAAACGTTAAGCGCTTCAACGCGAATAATGGCGGCGCTTTGAATACAAGTGGACCGACAGAGTCAAGCTTAAATGTGGACGCAGCGTTGCCGGCTGGTTTGCCACCACATATGAACTACTACGCCATGGATGCAAGCGACGCGCTCGTGAACGGCAACGCGCCGCCGTTATATCCGCATTTACTGCATAAATATGACGATTACAACATGAATGCGATGAATGCAGCGCTTTTAGCCACATTCCCGAATCCGTTTTACAGCTTGGGCCTTAATCCACGCCTGTCCCCTTACAACATACAACGTCTGTTGGAACTGACGGCAGTGggacagcaacagcagcatgaacaacaacagcatgagGTACAACAGCGCGAGGAAGAGAGTCTCAGTGAACGCGAACAACAGCAGCCTCAAGTAGAAGAGCACACAGCGCGTCATGATGAGTCGATTGATGAGACAAACGAGGAGGAGACACCGGATGAGCCTAAATTAGTGATGGATCTAGGCGAGAGTGATGCTAAAGATGGAGAAGATGATGATGAGGAGGAAGTTGAGTCGGCAAAAGGCGCCTCGGAGGCGGAGGACCATTCCAATCTTGTTGATGAAGAGAAGATTAACAATGAAGAAATTGAACCTCGACATGATGTGCCACTCGAATCACCCATTTTGGAAGAAAACCGCCAAAATACTCCGAGGTTAGAGAATAAAGAAGCCACAGAAACCACCGAAAAAGACATTTTACCGCAAATTAAAGTGGAGGATCATCGTCCCGTCACACCAGTGAATGACGATCTAGCTGAACAAGCGAGGAGTGCGGAAACTATGCCCGTTATCAAACAGGAATTAGACAGCACGGCCGAAATCGAGGAATCTCGCCCAATGGAAACTTCCACCCCCACCAGCAAAGGACAATATGAGTCACAAATTGACTCCAGTACATGCAACGCTTCTGAGCTGCGCTGTAGTCGTTGCGATACTCAATTCAATCACCAAACTGAGCTGGTACAACACGAAAAGGTGCTCTGCGGCTACATCAAACAGGAGATTCAACATAGCTACCAGGAGCAACACACTCAGCAACAGCGTGAAGAGCATGAAGAGGAACCGCAACAAGCGCCATCTTTAATGCGGCCGCAGCATAGTATGGATGACTCTGCCGAACAGTCTGGCATTTCAACGACTTCCCTATTGCATTCCAGCGATGTTGAAGATTACCAAGACGAGCGTGACTCCAACTCGCGCAACGATTGCAACAGCGAAAGCAGCGAACGCAAGGTACGCGTGCGCACCGCAATTACCGAggaacaacagcagcagctaaAACAGCACTACGCCATCAATGCGCGTCCCAGTCGCGAAGAATTCCGCATGATTGCCGCACGTTTGCAATTGGACGCACGCGTTGTGCAAGTATGGTTTCAAAACAATCGTTCGCGCGAGCGTAAAATGCAAAACTATCAACAGACGAATGGCAAACTGCCTTTCGCTTTGCCCGCAATCGAAGCGAGCGTTCCTTCTACCGCCGCGTTGGAGCGCACTGCACCGTCAGCAGGTTTACGCACGGGCGAAGAACAACCGTTGGATCTGTCGTTGAAACGCGATTGGCCTATAGCGGTGAAACGCAATGgcatgcagcaacaacattcGCCTTTATACGGTATTGCGCCAATGCAAAGCGTTGGCAGCGGTGATCTCAATGAAGCTATAAATTTGAGTCGTAAAATGTCTGCCTCGATGTCACCGCCTTCATCGCTATCGCCATCGTCCGCCGCATCCGTACCTCAGTCGCTTAAACAGCATGCGGCTGTATATTTCGGCGCGCCATCTGGGAGTCATCATTTCCAACGACAAACACCATCTCCGAATGAAGCGCCGCtaacgcaacaacaaccaattgCACCGCGCCACGgtagcaacagcaataacaacagttTCTCAGCCTCACTGGCCGGCCATCTGCCACCGTATATGCTGCCCGCCGGTGCGCCGCGGGGTCTGATGCCAATGGACGCGATCTTCCGCATGACACCCGGCGACTATGCTTGCAATCCGCTCATCAACAGTATTAAATTCCCCGACTATCGCGGTACCAGCCTCAGCCCAGGCGGTTCAGAAAAGCGCTCTTGGCGCGATGATGACTCGCGTATCTCGCACGATGACGACTACATTGGTAATGGTTTGTTGGCCAAGCCGAAGCGCCCCAAGGCGGAAACGCACGGCCATGCAGGAGATCCGGATTTGCCATTCGTGTGCGATCAATGCGACAAAGCGTTCGCAAAGCAGAGCTCGCTGGCGAGACACAAGTACGAGCATTCCGGTCAACGCCCCTACCAGTGTGTAGACTGTCCGAAAGCCTTCAAGCACAAACATCATCTCACCGAACACAAACGCTTGCATAGTGGCGAAAAGCCATTCCAGTGCAGCAAGTGCTTCAAACGCTTCTCACATTCCGGATCCTATAGTCAGCACATGAATCACCGTTATTCGTACTGCAAACCATACAGGGAATAG
Protein Sequence: MLSCLVPSSSRFGQEDNIINQSMPSSPAFAVQFPSLASSLHHPLHQNSSKSSSNAEEENTSMPGPISPHTDFMVKCPQCPKRLGFQSLSEHIACEHPHETLNAEHVPSSLAYHHRNHHHQLHNHQQHLHQLQQSYAQDSIVDIDDDNEDNDDNSSNSNSNSSNIKFTSSPNQYSNNNNDSNIKNNNNSITNIEYERRSPATPGATNHSSNNTALNSANSPNTKPSKQQQQQTNMIPNVTPTVSPTPPNDLSAATSPFAAAAAAAAAAAAAAQHQLPPLPPHLTHTHGMHPHLPAAAQLMAAMAAMQAQQQNGANNGIHNGSIGAGGGGVGVASNPTARTSPTSQLLALANNGHHAAAHALAGSHNGGGGGSVYDMDAARSTSSPGSIGGSEMGAYHCVQCPATFQTREQLEKHEVLHSPSAQTQTSNQSCKICHKAFANVYRLQRHMISHDESALLRKFKCNQCDKAFKFKHHLKEHVRIHSGEKPFGCDNCGKRFSHSGSYSSHMTSKKCISMGMKLNPNRAMLKALEKNAPGQNVKRFNANNGGALNTSGPTESSLNVDAALPAGLPPHMNYYAMDASDALVNGNAPPLYPHLLHKYDDYNMNAMNAALLATFPNPFYSLGLNPRLSPYNIQRLLELTAVGQQQQHEQQQHEVQQREEESLSEREQQQPQVEEHTARHDESIDETNEEETPDEPKLVMDLGESDAKDGEDDDEEEVESAKGASEAEDHSNLVDEEKINNEEIEPRHDVPLESPILEENRQNTPRLENKEATETTEKDILPQIKVEDHRPVTPVNDDLAEQARSAETMPVIKQELDSTAEIEESRPMETSTPTSKGQYESQIDSSTCNASELRCSRCDTQFNHQTELVQHEKVLCGYIKQEIQHSYQEQHTQQQREEHEEEPQQAPSLMRPQHSMDDSAEQSGISTTSLLHSSDVEDYQDERDSNSRNDCNSESSERKVRVRTAITEEQQQQLKQHYAINARPSREEFRMIAARLQLDARVVQVWFQNNRSRERKMQNYQQTNGKLPFALPAIEASVPSTAALERTAPSAGLRTGEEQPLDLSLKRDWPIAVKRNGMQQQHSPLYGIAPMQSVGSGDLNEAINLSRKMSASMSPPSSLSPSSAASVPQSLKQHAAVYFGAPSGSHHFQRQTPSPNEAPLTQQQPIAPRHGSNSNNNSFSASLAGHLPPYMLPAGAPRGLMPMDAIFRMTPGDYACNPLINSIKFPDYRGTSLSPGGSEKRSWRDDDSRISHDDDYIGNGLLAKPKRPKAETHGHAGDPDLPFVCDQCDKAFAKQSSLARHKYEHSGQRPYQCVDCPKAFKHKHHLTEHKRLHSGEKPFQCSKCFKRFSHSGSYSQHMNHRYSYCKPYRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01562774;
90% Identity: iTF_00191641;
80% Identity: iTF_00190572;