Basic Information

Insect: Bactrocera dorsalis
Gene Symbol: -
Assembly: GCA_000789215.2
Location: NW:32254-38587[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0021 0.12 12.4 1.4 1 23 934 957 934 957 0.97

2 7 0.0055 0.31 11.1 3.9 2 23 985 1006 985 1006 0.97

3 7 0.0003 0.017 15.1 1.7 1 23 1012 1034 1012 1034 0.99

4 7 0.00035 0.02 14.9 0.1 1 23 1040 1062 1040 1062 0.98

5 7 8.3e-05 0.0047 16.8 2.8 1 23 1068 1090 1068 1090 0.99

6 7 0.0053 0.3 11.1 0.0 2 23 1097 1118 1096 1118 0.96

7 7 1.8e-05 0.001 18.9 2.4 1 23 1124 1147 1124 1147 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0021	0.12	12.4	1.4	1	23	934	957	934	957	0.97
2	7	0.0055	0.31	11.1	3.9	2	23	985	1006	985	1006	0.97
3	7	0.0003	0.017	15.1	1.7	1	23	1012	1034	1012	1034	0.99
4	7	0.00035	0.02	14.9	0.1	1	23	1040	1062	1040	1062	0.98
5	7	8.3e-05	0.0047	16.8	2.8	1	23	1068	1090	1068	1090	0.99
6	7	0.0053	0.3	11.1	0.0	2	23	1097	1118	1096	1118	0.96
7	7	1.8e-05	0.001	18.9	2.4	1	23	1124	1147	1124	1147	0.98

Sequence Information

Coding Sequence: atgaCGTTCACCCAAGACTTTACTCGCGCCTGCGCAGTCGGCACACCGCCAACCGCAATGTCGGCGGTACAAGCGAACCAGCAACGCATTAAATGTGGCGAAGTCTTCATTTGGGACTGTGTCGGTGAACTCTTTGCCATCGAATGTTTGCTCTGCGAGGAGCATCCACTCTGCACGCTATCCGAATTCGCTGAACACATGGATATTTGGCATTACGACTGGACGGCTGAGGCGCACGCCTCATTACCCgatactacaacaacagcggATGGCTGTGTGTTGTTACCCAAGCAATGGACGGAGATCGAAAGCTCAGCAGCCGCCGAAGAGCGCCACACAGATATGCtgagcaatagcaacaactttGAAGACAACTACAGCGACTCGGAAACCATATCAATGGCGTCCGATTCGTCGGAAACTGGGTCATGGCATGCAGCCACGCTACTCGAAGGTGACCACAACGTAGCAATAATGCAGAATGTCACCGCTGTAAGCTCAACTGAAACCTTTGAAGAGCTACTTTGCGGCGCAGCGGTTAGAGTGTGGGGCAATGTGAATGATCTGCGCAGCAGCGGAGAGGTGTATGTAGAACGAGCGCAGAGTAGCGAAACTGAAGAACTGGCAGCGGCCAGCGCGCAAGCAAATACAATGGGTACTATTGTGAAGAAACGGGTTGAGAATCCACTACTGAAACGCTTCAGAACCGAGAACTTAATAgagatttatgaaaaatttcccGAACTCTGGCATAAAGACGAACGCAGTAGCCAAAAGCCTGAGACACAAGTGAAGGCATATCGCAGCATCAGCCAGAAACTAAAGAAAGTTGGTATACATCTTAAAACGGCGGCTGTACAACGGCGTCTTAATGCGCTACGCAAGCGTTATCGCCTCGAGAAACTGGAGGAACTTAAAGCTCATTTGAAGGGTCAAATATATGAAAGCAGCTTCGAGTACTATGCGCACTTACAATTCTTGAGGGAGCACATCGAACCGCAGTTGTGCAAGATTTGCAGGCGGATTTGTAAAGATGCAAAGGAATGTTGTGAGGGCGGAGATGAAACGAGCGCAGAGAAGTTGCCGATAAGCAATGAAGCTGCAGAAAGCGGCAATGTGGTTGCAGAAGGAAGGGAAGCAAATGAGGCACTGTGCGTTGTCAGAGAGGCAATACAAGCAGACGAGGAAAGCATTAAAGAAAGTACCGAAGAAGGCAACGAAGAAAACACTGAAGAAAGCAGCGAAGGAAGTAACGAAGGAAGCAGCGAAGGAAGTAACGAGGAAAGCAACGAAGGAAGCAACGAAAAAAGCAGCGAAGGAAGCAACGAAAAAAGCAACGAAGAAAGCTCCGAAAAAAACAGCAAAGGAAGCAACGAAGTAAGTTCTGAAGACATCAACGAAGAAAATTCTGAAGTAAGAAACGAGGAAAACAACGACTTACAACATTCTGTTAAGGAAATAACGCTTCAGCTAAGCAAATCTGCAGCAGAACAGTTCGAGGTTATGGtcgaagaaatattgaaaagtgaGTACGCAATGCAGGAGGCGAATTTAGAAACAAGTGAGTTGGAGATCGAAAGTAATGAATTCGAACCAGTTGATACCACACTACACGAAGTTGTGATGGCCATAGAACAGTCGAATGGGAGCCTAGAAGGGCCTATATTGCAGGAGAActtcgaaataaatgaaaatccgGATGTAAGCGTAAAGGAGTCAATGGAACTGGTATCAGTTGTGGACACCAGGAACAAGCCACACGAAGCTATCACGCTCATAGAACAAGGGAATGGGAGACTAGAAGGGTCAATGTTGCAAGAGAACCGCAAACTAGACAGAAATCAGAATGAAAGCGTAAAGGAGTCTAGGCTACCGCGACGCTCGCTGCGGAATAGAAGTAAGGTACAAATTTTGGAGGTGATAGAACTGCCGAGAATGCAACCTTTCAAGGCACAAGAGCCCGCAATTAGCACCTCAACGCCACATGACCAACAGACTCCAGAAATACATGAGTGCAGTTTTGAAGCTATAAGCAACGCTGACGAGAACATGGCATCGGAGGAGTATGATTCCTCGAACGGTGATTCGGGTATACTGCGCGATTACGATGAACAACCCGATGCCGAGACAAACCACGCCGACGAGACTGGATCTTTTGCGCGACTCACGGCTGAGCAAACGCACAAACTGATAGAACTCTACGGTCAAAATCCGCTGCTTTGGGACCCCGACCATGCAGACTTTAGAGCGCGCGTGCGGCGGCGTAATGTTTGGCGTCAAATAACATCACAGTTGAATGCGCACTTCCAAAAGCGCTACACTTGGACGAAGGTGCACCGCAAAATGCACGACTACATCAAGTATTATCGGCGCGAGCGGCAGCGCATCGAGTTGGAGGGCGGCTGTACGCGTTGGTGCTTCTATGACGACTTTGCTTTTCTCAATGAAGTGCTGGCTGAGCAGAGCAGCGATGCGCCAAAGCTGCTGCTGAACAAGCAACAAAACATGAAAATCATCGAGGTGTATGCCGCGCATCCGCAACTGTGGGACACCAATCATGCACTCTACAAGCGGCGACGCCTACGTCAGAGCATTTTCAAGGCGATAAGCGATCAACTGCGCGACGCGCACAACGTAAATATATCGACGCTTAAGTTGAAACAGCGCATTGTGGAGTTTCGCTGCACCTATCGTATGGAGAAGGAGCGACGCTGTGCCACCGAGCAGCGAGGTGGAACTTATGAGCCCTGTTACGAGTACTATCAACTACTTAGCTTTCTGGACGCGCATATAGCGCCGTTCCAATGCGCGGAGTGCAGCGcacaatttaaaaaacacaCCGAAATCGAGCGTCACATGCGGCAAGCgcatagcaaaaataaaaagaaaactactGTCAAGCAGCGCGCGAAGTCGATCGCCCGCGAAGCGAAACCTGTCACACTAGAAAATGTCTGCCACATTTGCGGCATAAGTTTCACGCTGAGTCGCAACCTCATGTGTCACCTGAAGCGTCACACAAATCAGCGCGAATACAAGTGCGTCCACTGCCCAAAGAAGTTCTTTGACGGCGCCACTTTGCGCGTGCACGAACGTTCACACACCAAAAGTCGCCCCTACGTCTGCGACCAGTGCGGCGCCGGCTATGCGACAGGCAGTAAGCTCAATCAGCACTTGAAGCGTCACAGCGGGCAACGCGACTTTACGTGTGAACTGTGCGACAAGGCATTCTACACGGCTTTCGAATGCGAGCgtcacatgcgcacacacatgaACATACGCGAGAAGGTGTGTCCCATCTGTGGCAAAGACTTCGGCGTCGGCTCGGGCTACTATGCACACATGCTATTGCATACGGGCGTCAAACGGTACAAGTGCAAAATGTGTGGCAAGCAATTCGCGCAGTTCGCAGGCCTCTATAAGCATCGTAGACGCTATCACCCGAAAGAGTTTGCGTTGGAACGCGCGAAGAAGGGCGGACGCGTCGCAAAGGAGGTGGCGGACGagtaa
Protein Sequence: MTFTQDFTRACAVGTPPTAMSAVQANQQRIKCGEVFIWDCVGELFAIECLLCEEHPLCTLSEFAEHMDIWHYDWTAEAHASLPDTTTTADGCVLLPKQWTEIESSAAAEERHTDMLSNSNNFEDNYSDSETISMASDSSETGSWHAATLLEGDHNVAIMQNVTAVSSTETFEELLCGAAVRVWGNVNDLRSSGEVYVERAQSSETEELAAASAQANTMGTIVKKRVENPLLKRFRTENLIEIYEKFPELWHKDERSSQKPETQVKAYRSISQKLKKVGIHLKTAAVQRRLNALRKRYRLEKLEELKAHLKGQIYESSFEYYAHLQFLREHIEPQLCKICRRICKDAKECCEGGDETSAEKLPISNEAAESGNVVAEGREANEALCVVREAIQADEESIKESTEEGNEENTEESSEGSNEGSSEGSNEESNEGSNEKSSEGSNEKSNEESSEKNSKGSNEVSSEDINEENSEVRNEENNDLQHSVKEITLQLSKSAAEQFEVMVEEILKSEYAMQEANLETSELEIESNEFEPVDTTLHEVVMAIEQSNGSLEGPILQENFEINENPDVSVKESMELVSVVDTRNKPHEAITLIEQGNGRLEGSMLQENRKLDRNQNESVKESRLPRRSLRNRSKVQILEVIELPRMQPFKAQEPAISTSTPHDQQTPEIHECSFEAISNADENMASEEYDSSNGDSGILRDYDEQPDAETNHADETGSFARLTAEQTHKLIELYGQNPLLWDPDHADFRARVRRRNVWRQITSQLNAHFQKRYTWTKVHRKMHDYIKYYRRERQRIELEGGCTRWCFYDDFAFLNEVLAEQSSDAPKLLLNKQQNMKIIEVYAAHPQLWDTNHALYKRRRLRQSIFKAISDQLRDAHNVNISTLKLKQRIVEFRCTYRMEKERRCATEQRGGTYEPCYEYYQLLSFLDAHIAPFQCAECSAQFKKHTEIERHMRQAHSKNKKKTTVKQRAKSIAREAKPVTLENVCHICGISFTLSRNLMCHLKRHTNQREYKCVHCPKKFFDGATLRVHERSHTKSRPYVCDQCGAGYATGSKLNQHLKRHSGQRDFTCELCDKAFYTAFECERHMRTHMNIREKVCPICGKDFGVGSGYYAHMLLHTGVKRYKCKMCGKQFAQFAGLYKHRRRYHPKEFALERAKKGGRVAKEVADE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00190248; iTF_00191629; iTF_00193876;
90% Identity: iTF_00190248;
80% Identity: -