Basic Information

Insect: Bactrocera dorsalis
Gene Symbol: -
Assembly: GCA_000789215.2
Location: NW:1747588-1750294[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.019 1.1 9.4 2.3 2 23 204 226 203 226 0.94

2 9 0.00049 0.028 14.4 5.8 1 23 258 281 258 281 0.96

3 9 3.8e-05 0.0022 17.9 2.3 1 23 289 311 289 311 0.91

4 9 0.00015 0.0087 16.0 3.7 2 23 320 342 319 342 0.95

5 9 0.00057 0.032 14.2 0.1 3 23 350 370 349 370 0.95

6 9 3.6e-05 0.0021 17.9 1.5 2 23 379 401 379 401 0.98

7 9 0.42 24 5.2 0.4 3 23 411 432 409 432 0.88

8 9 2.4e-05 0.0014 18.5 2.4 1 23 437 459 437 459 0.97

9 9 0.00064 0.036 14.0 1.8 1 23 465 488 465 488 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.019	1.1	9.4	2.3	2	23	204	226	203	226	0.94
2	9	0.00049	0.028	14.4	5.8	1	23	258	281	258	281	0.96
3	9	3.8e-05	0.0022	17.9	2.3	1	23	289	311	289	311	0.91
4	9	0.00015	0.0087	16.0	3.7	2	23	320	342	319	342	0.95
5	9	0.00057	0.032	14.2	0.1	3	23	350	370	349	370	0.95
6	9	3.6e-05	0.0021	17.9	1.5	2	23	379	401	379	401	0.98
7	9	0.42	24	5.2	0.4	3	23	411	432	409	432	0.88
8	9	2.4e-05	0.0014	18.5	2.4	1	23	437	459	437	459	0.97
9	9	0.00064	0.036	14.0	1.8	1	23	465	488	465	488	0.98

Sequence Information

Coding Sequence: ATGCCTTTTGATCAGTGTTGTCTGTTATGTTTAGAAAAAGTCAGTCCAACTGACAACAGCATAAATATCAATAGCGATGACTCGGAATCGGTAAATGTGCGGAATATAATTGAACAACATTTCAAGGAAGAgATCTTCACCATGGCAACATTTTCAAGTCAAATTGTATGTAAACAATGTTGGGAATTGTTGAGGTcatttcatgaattttatatCCAAGTAACACAAGCCCATCTGCAAGCGCATAACAAACTCAAGGCTTTGCAAGAGTTGGAAATATCGGTTACAGACATTAAAGTCGAACCGGATGCTGAAGACAAACTGGCTTTGCAAGAGTTGGAGGTAATAGCGGTTACAGACATTAAAGTGGAACCGGATATTGTTGACACATTGGCTTCATCACCAGTcGGTGAAGAAAAAGATTCCGATTACTCGGATGGTGAAAACAGTAGGTCAATGAGCTCAACTTCTGTAAACTCTGAAAGTCAAGAAGATGACGAGGAAGAGAAAAGagggaaaacaaaaacaaaacgagcCCCTAAACCCCGAAATAAGAAACGACACAAAACTTTGGACCATGATCAATTTattgcacaaaattttaaattgatctGCTGTTTATGTGAAAAATCTTTGAAAGATTTTCGAGAATTGAAAATGCATTATCGCCAAGAACATCAAACAAATGGCTATGCTAAGTGttgtaataaaaagttgtacAATCGAGGCGTTCTCGTTGATCATATTCACTTTCATATTAATCCAGAATACTTCAAGTGTAAGTTCTGTGAAAAAGTATTATGCGATCGAAGTAATCTCGAATCACATTTACAACATTTTCATGACTCCAAAGAACgtactatatacaaatgtgaAATATGTGGCAAAAGTTTTTATCGTCGCAAAGTTCTTGCACGGCATTGCCTAATCCACGCACCTGAAGAACAAAGAAATGTGAAATGCACACAGTGTGAAAAAACaTTCTGCAATCAGTACCTTATGAAACAACATCTAAATCTGAGCCATCTCAATctatatgcaaaaatttgtgACATATGTGGCAAATCACTGAACGGCAGCGAAGCTTTTCAACGGCATCAAGATGAACATGCTGGTGTGCAACGAACAAGGGAGAAgtgtaaaatatgcaatatggAGCTAAAGACGAAATATGGTCTGGCGAGACATATGAAAACAAGGCATACCGAACCGTTTCAAACACCGCAGATCTGTCCAGTCTGCTCTAAAGTATCTCCCACTCTACGGGCGCATAAAAGCCACATGGAGTATATGCACAGCGGTAAAAAACACGTTTGCGCTGTTTGCGACAAAACATTTAAACTGCCGAAATGTTTAAGGgAACATATGGCTACACACACCGGGGAAAAATTATATACGTGCACATTTTGTCCACAAACATTCAATTCGGATGCGAATATGTATGCGCATCGAAAGCGAAAACATCCCAAAGAATGGGCGGAAAAATGTGCAAAGCGAAGTACTTCTACAGGAATGGGACAACAGATAACAAATGATTTAGAATCCATAATCGAATCAGTGAAAGATGCGgatgaaacaaattaa
Protein Sequence: MPFDQCCLLCLEKVSPTDNSININSDDSESVNVRNIIEQHFKEEIFTMATFSSQIVCKQCWELLRSFHEFYIQVTQAHLQAHNKLKALQELEISVTDIKVEPDAEDKLALQELEVIAVTDIKVEPDIVDTLASSPVGEEKDSDYSDGENSRSMSSTSVNSESQEDDEEEKRGKTKTKRAPKPRNKKRHKTLDHDQFIAQNFKLICCLCEKSLKDFRELKMHYRQEHQTNGYAKCCNKKLYNRGVLVDHIHFHINPEYFKCKFCEKVLCDRSNLESHLQHFHDSKERTIYKCEICGKSFYRRKVLARHCLIHAPEEQRNVKCTQCEKTFCNQYLMKQHLNLSHLNLYAKICDICGKSLNGSEAFQRHQDEHAGVQRTREKCKICNMELKTKYGLARHMKTRHTEPFQTPQICPVCSKVSPTLRAHKSHMEYMHSGKKHVCAVCDKTFKLPKCLREHMATHTGEKLYTCTFCPQTFNSDANMYAHRKRKHPKEWAEKCAKRSTSTGMGQQITNDLESIIESVKDADETN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -