Basic Information

Insect: Bactrocera dorsalis
Gene Symbol: -
Assembly: GCA_000789215.2
Location: NW:325266-330546[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.24 14 5.9 1.8 1 23 243 266 243 266 0.94

2 9 0.24 13 5.9 5.3 2 23 355 377 354 377 0.95

3 9 0.00013 0.0075 16.2 1.1 1 23 763 785 763 785 0.97

4 9 0.00013 0.0076 16.1 1.3 1 23 791 813 791 813 0.98

5 9 0.00013 0.0073 16.2 0.9 1 23 819 841 819 841 0.99

6 9 1.9e-06 0.00011 22.0 0.4 1 23 847 869 847 869 0.98

7 9 6e-06 0.00034 20.4 0.7 1 23 875 897 875 897 0.98

8 9 0.00018 0.01 15.8 4.8 1 23 903 925 903 925 0.99

9 9 1.6e-05 0.00092 19.0 3.7 1 23 931 954 931 954 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.24	14	5.9	1.8	1	23	243	266	243	266	0.94
2	9	0.24	13	5.9	5.3	2	23	355	377	354	377	0.95
3	9	0.00013	0.0075	16.2	1.1	1	23	763	785	763	785	0.97
4	9	0.00013	0.0076	16.1	1.3	1	23	791	813	791	813	0.98
5	9	0.00013	0.0073	16.2	0.9	1	23	819	841	819	841	0.99
6	9	1.9e-06	0.00011	22.0	0.4	1	23	847	869	847	869	0.98
7	9	6e-06	0.00034	20.4	0.7	1	23	875	897	875	897	0.98
8	9	0.00018	0.01	15.8	4.8	1	23	903	925	903	925	0.99
9	9	1.6e-05	0.00092	19.0	3.7	1	23	931	954	931	954	0.98

Sequence Information

Coding Sequence: ATGATGATCAACACACTGCTAGAGCATGTACCCATAAAACTGGAAGCACCGGATAATGGCGACGAGGAAGACGCAGAAAACAATAGCAAACAGAAAAGcaaaattgtgaaaatgaaTGGTAAGAATGTAGTCGTTGAGGAAGATGGTAGcggtgatgatgatgaggagGACGATGAAGACACTGATGAGGATGATTCTGAAACGGATCTTCTGGaggaagatgatgatgatgcgaCATTAGTACCGATTAGCAGCGATGAAGAAGCGGAGTTGGAAGCGCAACGTATACGTTTCCCTGAATTAATAGGGAAAAACTTACATTTAACAGCTCTTCCGAAAGATGGGAAAAAGACTAAATCCACGAAGAAATTGCGTGAACGCAGTGTTTCAAGTTGTGCTAGTGTAAGCAGTAAAACTTCAATAGCATCTTGTTCATCTGCCTCATCAATTGCAGATAGCAAATATTCGAATCAGAGTGATTtaccaaagcaaaaacaaaagtcagATTCAACGATTAAAAAGACAGTTGCTTgtagaaatatagaaaaaggtGGTGCGAGTACGGAATCCGAAGCCGAACATGATGATATTACTGTAACATATAAACGACCCCTACGAAATCGGGTTCCCTCTACTTGCTCCGTCGCATCATCGTTGGTTACGCCTTCCTGTCAAACTGAATCTTGCGgtaatatttatgtgtacgAGGAGCAgcaaaaacttatatttaattGCAGCTTTTGCGATTTACGTTACGGCGATATGACGTCGTTCGCAAAACATTTGCATAATGCACATAAACTGTTTCAGGAGGAAGAAGATGTTACCTCAACAATAACGGCGCGTAAAAGTCCACGCACACAAACGAAGCAACAGGCTGAAAGCAAAGCGCAAGCGCAGGACAACAAGCTAAAGGTGGTAGTTAAGACGGAAATGAAGCCAAACCAGGAAGAGTGTTGTGATGATAATTCAAGTGCACACTCAATGTCACCAATTCCTGTTGATGCAACACTAGAATCATGTGGGAATGTTTTTATTCTAAATGGCAAAAAACTTTTCCTGATTTGTGGCCACTGTGAGTGCAAATATGCCACACTGGATTTATTCCATAAACATTTGCGACAACAGCATCAACTATTTTCTGGCCCTGTAAAAGAAATAGATGTGTTGCCGAAGTCCGAAATAAAGGTTGAGCTGCGCGGTGAAGGAGAGCAACTTCCAAAAGTCAGTGCAGCCGCTCTAGCCATTGAGAGACAGCGAAAAGCTAGCATAGAAGCAATGATAGCTTCGCCTGTAATGGTAGTACTACCTGTGTCACAAAACGTGGACAATAATGACATATTGCCGGCGACAGTTTCAGTGCAAGTACCAGAAACGCCACCCCCAGAGGAAGACAAGACAGTGGAAGAGTCAACATTAAATACGGCCAACAAGCAAAAAGTGGTTATTGAAAAGACATTTTTGAATGAAACAATTTGCGAAGCAGATAATGCAAAGAAAGTAGTGGATGATAATGAGGAGCAACTAGGGGTTGAGGAGCATGCGCAGTCGGAAGCGGGGCAACAGGTGCATGCTACCGGGAGTGGTAATAATGAAAATGCACATAAAACTTGTGCAGAAACGGTTGAAGATGGGAACAGTCAAGAACTGAAACCTGTTGTAAAGCGTAAAAGAAAACGCCGGTCGGTATTTTCGAAACGATCGCCGCCAAAGAAACGTGCTGCTGCAACAAAAGACGTCAGTTCACATCAAAATGATAATAAAGATGAAAGTAACACCGATGACGCAATTAAATTGCATTCCGCAGATGACCCTGCAGCAGAGCGAGCTGATACATCGCCATGTGAACTCAATTTGGTTCCCGTTAGCGAAGTATCATCGATGGAAACAGATATAACCGACTCAGATGTCAAAACTTTGACTGGTAGAGTAGAGGATGCTGCAAGCACGAATTTCACCGCTAATATAGAAGAGGTAGTGTCAGAGGCTAATACCTCTCTAAGCGCTcctgaaattaaaaagcaaaaaggaaaaacagcagaaaaaataaaaatccctCCAAAGCCGACTGCCAAGAGAACTCGCAAAAAGAAAGCTCCTGCTGTTGTAGAAGAACAATCAGTCTCACTGTGTAAAACTGGTACCAAATCTAAATCGTCGTCTCCTGAATGCTCAGTTAAATCTTCTCTTGACCTCGAATCGACAATAGATGCAAAAGTGGGAACCAGTAAACCCATTGCACATGTCATGCGTACTACTTGCTACTCCGAAACACAAAAGTTACGCTTTGCTTGCAATCAGTGCCCAAAATCGTTCAGTAAGTCAACACGGTTGGCTGAACATAAGCGTTTGCATACAGGAGAGAAGCCGTTCAGTTGTGAGGAATGTGGGAAAACATTCCGCATTAAAAGACGTCTAATTGAGCATAAAATGCGACATCTCAAAgtgaaaacatacaaatgtgAAACGTGTGGATTACCAGTGGCTACCAAACAAGACCTCAGGCTACATCAACGCCATCACACGAATGATCGACGCTATCCTTGTACCGAGTGTTCGAAAGCCTTTGTGCGCAGCACcgatttaaaaatacataagcgTGTCCATACGGGCGAGAAGCCGTTCGTATGTGAAATCTGCCAGAAAACATTTCGAGCCAATCAGAATCTCCTTGTACATCGTCGTTCACACATGGGCGAAAAGAATTATAAATGTGATTATTGTGACAAACGCTTCATGCGTAATATTGACCGCAAGGTTCACCATCGAACACATACAGGTGAAAGACCATTTAAATGCGAAATTTGTGGACGTTGCTACTCTTCCCGCGCCCATGTGCGCACTCACATACAACGTGAACATGTCGAAAATGGAGGCGACACAAAACCTGAGCGTAAGAAGAACGAACGAAAGACAAAACCAGCTGCGGTGGACGAAATTGTAAAGGAACAACAGTTAATTGATGAAATACAAGAACAAATATTGCAATGCTTAAAAACCGACGATTTAGATGAAGAAGAGTTGTCACCCACACCCACACCAACAGCAACTACTACAACTATTGTGAAACctgctgaaataaaaaaacagagaCGTGGAAAATCAACACCCAGGACATCGCCCGCTTTGAAGAACGGTGTTGACATCGATTTACCCCATCAGGTTCAGCAGCACGCACAATCGAGGGGTGTGCAACAGGTGTCCGTAACTGTGTCAATGCAAATGCAGGACGATGTGGGTATGACAGATGAGCCGATGCCTGAAAAGGAAAACGCGACGACGTTAGTTGGTGCGGTCTCAGCATCACTAAGCAAAAACACAAAGAGTGAGCGTAAAATATCGAGCTATTTCTCTGTGTTGGgacaaaaaacagaaatttaa
Protein Sequence: MMINTLLEHVPIKLEAPDNGDEEDAENNSKQKSKIVKMNGKNVVVEEDGSGDDDEEDDEDTDEDDSETDLLEEDDDDATLVPISSDEEAELEAQRIRFPELIGKNLHLTALPKDGKKTKSTKKLRERSVSSCASVSSKTSIASCSSASSIADSKYSNQSDLPKQKQKSDSTIKKTVACRNIEKGGASTESEAEHDDITVTYKRPLRNRVPSTCSVASSLVTPSCQTESCGNIYVYEEQQKLIFNCSFCDLRYGDMTSFAKHLHNAHKLFQEEEDVTSTITARKSPRTQTKQQAESKAQAQDNKLKVVVKTEMKPNQEECCDDNSSAHSMSPIPVDATLESCGNVFILNGKKLFLICGHCECKYATLDLFHKHLRQQHQLFSGPVKEIDVLPKSEIKVELRGEGEQLPKVSAAALAIERQRKASIEAMIASPVMVVLPVSQNVDNNDILPATVSVQVPETPPPEEDKTVEESTLNTANKQKVVIEKTFLNETICEADNAKKVVDDNEEQLGVEEHAQSEAGQQVHATGSGNNENAHKTCAETVEDGNSQELKPVVKRKRKRRSVFSKRSPPKKRAAATKDVSSHQNDNKDESNTDDAIKLHSADDPAAERADTSPCELNLVPVSEVSSMETDITDSDVKTLTGRVEDAASTNFTANIEEVVSEANTSLSAPEIKKQKGKTAEKIKIPPKPTAKRTRKKKAPAVVEEQSVSLCKTGTKSKSSSPECSVKSSLDLESTIDAKVGTSKPIAHVMRTTCYSETQKLRFACNQCPKSFSKSTRLAEHKRLHTGEKPFSCEECGKTFRIKRRLIEHKMRHLKVKTYKCETCGLPVATKQDLRLHQRHHTNDRRYPCTECSKAFVRSTDLKIHKRVHTGEKPFVCEICQKTFRANQNLLVHRRSHMGEKNYKCDYCDKRFMRNIDRKVHHRTHTGERPFKCEICGRCYSSRAHVRTHIQREHVENGGDTKPERKKNERKTKPAAVDEIVKEQQLIDEIQEQILQCLKTDDLDEEELSPTPTPTATTTTIVKPAEIKKQRRGKSTPRTSPALKNGVDIDLPHQVQQHAQSRGVQQVSVTVSMQMQDDVGMTDEPMPEKENATTLVGAVSASLSKNTKSERKISSYFSVLGQKTEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00190171; iTF_00191552; iTF_00193792; iTF_00192277; iTF_00193020;
90% Identity: iTF_00191552;
80% Identity: -