Bdor001635.1
Basic Information
- Insect
- Bactrocera dorsalis
- Gene Symbol
- hang
- Assembly
- GCA_000789215.2
- Location
- NW:522377-541103[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.044 2.5 8.2 1.3 3 23 226 247 225 247 0.93 2 20 0.027 1.6 8.9 3.5 3 22 353 372 351 372 0.90 3 20 0.16 9 6.5 0.9 1 22 447 468 447 470 0.90 4 20 1.1 65 3.8 0.6 2 21 482 501 481 502 0.93 5 20 2.5 1.4e+02 2.7 1.6 2 23 510 532 509 532 0.88 6 20 0.0018 0.1 12.6 0.2 3 23 597 618 596 618 0.96 7 20 4.4e-05 0.0025 17.7 0.1 1 23 626 649 626 649 0.96 8 20 1.2e-05 0.00069 19.4 0.1 2 23 741 762 740 762 0.97 9 20 0.12 6.8 6.9 3.2 2 23 829 851 828 851 0.94 10 20 0.0031 0.17 11.9 0.2 2 23 860 882 859 882 0.95 11 20 0.0003 0.017 15.1 0.8 1 23 895 918 895 918 0.98 12 20 9.4e-05 0.0053 16.6 1.1 1 23 982 1004 982 1004 0.99 13 20 0.0015 0.083 12.9 0.9 1 23 1012 1035 1012 1035 0.96 14 20 0.02 1.2 9.3 0.1 2 20 1043 1061 1042 1061 0.95 15 20 1.2e-05 0.00068 19.5 0.2 3 23 1133 1153 1132 1153 0.98 16 20 3.9e-05 0.0022 17.8 0.7 1 23 1188 1210 1188 1210 0.97 17 20 9.9e-05 0.0056 16.6 0.5 2 23 1270 1292 1269 1292 0.92 18 20 0.28 16 5.7 0.8 2 19 1312 1329 1311 1331 0.93 19 20 0.044 2.5 8.2 0.7 3 23 1347 1367 1347 1367 0.98 20 20 0.00062 0.035 14.1 1.0 1 23 1623 1645 1623 1645 0.98
Sequence Information
- Coding Sequence
- ATGTCGGACGGCAGCCCAGTGCGTGCGCGACAAAATTGCTGTCGCCTCTGCTTGGCTCCGGGCAGTGAATGCATATCCATATTAAACAGCTATGCGGCGGACAAGGAACCGTTGGCTACTAAGATACAGAACTGCGTCAGCATCAAGATCAATCCCGAAGATCACCTATCACTGCGCATTTGTCATGCGTGCATCAGTTACCTGAATTCCTGGCAGAGTTTCAAGAATCGCTGCCTTGCCTCACAAAGCAAGCAACGCAGTTGGTTGGACACGAATAAACGTCAACAATTGCTCGACAACAATGTCAGCATATCAACGATTGGTGCCGATGGCACcggccaacaacagcaacaccaagcGGACGACAGTGAACAGCACAATGCGCCGAGTTTGGCATCATCGATTTTGGATGGAATTTCGTCGTTGAAGAAACGCAAATCTTTAACTGTTTATCCTTTGCCAGCTGTCGAAATCAAAGATGAACCAATGGATCCCGATGATGAATACAACACCAAACAGCATGACGAGTCTGATGACATGGTTGACCCAACACTCTTCTTGGAACGCACCGAAGAGGAGGGCGACGAGTCGCTCATGGAACACATGCCCTATCAGTATGAGCAACCGCGACCGCCCATTGAGCTAGCCCCCCTGTTGGACACCAAAGAGGCGTCCTGTCGCGCctgcaatttaaaattctctACACGCGCCAACGCACGCCGCCACGAACGCAATTTGCACCCCAATCTCTTTGAGCTGTCAACATCGACACCAAACAATATGCCGGTGACCAAACCCACACCCGCCTTGGCAGCCGCACTGGAGCTGCAACGCGCCACAGCAGCCGCCGTAGCCGCAGCGGAGGCGTCGAACGCCGCTTCCGGCATGATAACACCGCTCAAGTACCGACAGCAAATCGTGAACGCGTTCAATAAGTGTGAAATCGGCGGTTTCGACTATGAGCATCCGGAAAAGTATCAACACCATTTGACCGATGAGAAGATCGTTTTCCTACAACAGAACGATGAATTTTTGCGCCAATATCAGAATATGACTTGCCGTTGTTGTAACAAAACCTATTCGACCTATAAGAATTTCATGGCACACATGCGCAAGAAATACCTAGCATTGCCGCGCAATCTCTGCTTCAATTGCCTGAAGCTGAACGACTCGAAGGCGCTGTTCATCTCGCATTTGAAGCGCCGCAACTGCATCAACTTGTACAAAGTGTTGCATGCGCTCATGGCGAAGGACAGCAACTTCGCCGCTGCAGTCACGGCCACAGCGGCCGCAGTGCCCGACAAGTTGCGCGCCAAGGAGTTGCTCGTCAATAAGATGTACGAGTGCAAGTTGTGTCCGCAGAAGTACCGGCTGAAGTTGGAGTTCCGTTCGCACGTGTACGACGAACACGCCGACATGCAACGCAAGGACACCATGCAAAAACAATGCTGTTACTGTGGCTTGGAGTTGGATGATCCGGCCGAGCGTAAACGTCACTACAACAACATGGATTGCATTGTGTCGCTGCGTTGCGTCACATGCGATGCCAAATTCGATAATCACCAGAAATTCCTCGATCACGTGTACGAGAAGCATTTGGCCGGCTTTGGCGAGCAAATGTCCACATCGTCGCTAAATGCTAGCGCCATAAGCACAGAAAATTCGCCGGCCAAGAAGTCAACCGTCGGTTTGGGTGGCGCCTCCTCCACCGATGAGTCACGCAGTAGTCACCAAGCTGCCTCCGTAAATCAACCGAAATCACAATATTTCTCACGTATGCCACAAGCTTGCCCCATATGCGATCAACagtacaacaactacaacaatgtGTTACGTCACATGGAATCGAAACATCCGGACCAATTGCCACAGACATACAAATGCGTCAAATGCGGCATTGGCTATCCGCGTCTCTCGAATTTGCGCGAGCACATGGTCAGCGCACATTCGGCGGACAAGGCGCGTCACACGGGCTTTGAGTATATTGTGAATGCGGATGCGGTTAAAATCGCCTATGGCACACAACAGAATGTCTACACGGGACGCTATGATTATGTGATGAAGGATTTGATGTCGATAACGAATGGCGGCTCGATTGCTGACGACGATGAGAACTCTAGCGAGAATCCAGCAAAAAAAATGCGCACAGACACCGGTGCCGCTGTGACGACCAGCACTGGCTCCGGTGGCAGCGGCGGCAATATGTACAGCAGTCTGAAAGAGTGCCCCATCTGCaatgcggtcttcagcaacaacATCGGACTCTCCAATCACATGCGTTCACATAGTGCGGCGGCACAGAACAATTCGCTGACACCGGGCGCGATAAGTGCCAGCAAATCGGCACCGAGCGGTCTAACTATAACACCAGCACCACCGGCGAAATCCACAACGCCACCGGCTATGCAACATCAGACCGCCGTGCAGAAGGCGATATTCAAGCGTAGCTTGGAACAGGCAGCTGATCGACGTTTCCGACGCATGCGCTGTCGCCTCTGTCAGCGTCGTTTCTCCTCGAAGAAATCGTATCGTTTCCACATGCTCAACGACCATCAAATACGCAATGTACAGTTTATCAAATGCAAGCTGTGCGATGCGGAATTCGCCTACGAGAAGGGCCTGAAGGTGCACATGTTCAAGATACACAATACACTGCTGAAGGACGAAATGATCGAGAAGCAATTTGAATGTGATATTTGTTCGATTGTGTACCGCAGTGAGCCGCAGCTGCAGCACCACAAGAAGACCGTGCACGGTAGCGCTGTCGGCGGCGCCGATCAAGCCGATACGACCTTCGACGACAGCTTGGCCGGCGGTGCTGGTGGCGCTGATGTCAGTGCCGCCGCGAATCCGGCTGATCGCTCGGGCTTGTCGACGCCGGTGAGTAGTGTGGGCGCCGAACGCAGCACGTTGGACAACTCAACGAGCGGTCCGCTCTACTGGTACCAGTGCAAGTACTGTCCATCGAACTTCAATACGAACAAGAAGTTGGCTATACACATAAATTCGCATGACGAATTCGATTCGAATGACTATTCCTGCAAGGATTGCGGCAATGTCTATAGCGGACGCAAGAGTCTATGGGTGCATCGCTACAAGAAACATCCACAATTCCCCGAACCTTCGGAATGTGTGCTCTGCAAGAAGGTCTTCTTCGATAGTCAGATGCTGGAGAATCACATACCGACCTGTAATCGCAAACCGATCAACGCATCAGCCGCTGTAGCCGAAAGCGCTGGACCGCCACCAATTTACAAGCATAAAACGggcgatgacgatgatgatgcaTCGCACGATGCTAGCGGTGTAATAACGACAAGTGCTTTGGGTGGTGGCGAACTGGAGATTACACCGATACCGGCCAGTGGCATGAAGATTAAGCTACCCGAAGTGGCTTGTACCATATGTGGGCAGCGTTTCACCGATCAGGAATTGTTcgccaaacacatacaaatgcacgaAATGGAATTGTATACGGATAATCCGTTGGCGGCCATGTTTGATACTGGCCCAGCGGATCCGAATCAATTCTATTTGGATCGGGTGAATGATAATGGCGAATACGCCTGCGATTTGtgtaataaaacatttacaCAAATGACTGCACTTAAAGTGCATCGTAAATGGCATTTCAGAGGTGATAGCAAACAGAACCAAGCCGACGGGGATCTTTCAGCCAATGCAGCAGCGAACCACTTATCACAGATCCAGATCAACCATCAACATCCACCGGGATTACAAGCGGTGGGCCTTATGCCCAATCCCCATCATCACTCTTCAAAATCCCAGAAACGCAAACGCGAACTTAAATGCGAATACTGCCCGTCCACcttcatcagcaacaacaacctgcGCCGTCACATCTACGAATTGCATAAAGAAGAAATCGGCAACTTGCCGGTGCCGCCGAAAATCAACACCGATCCATATTTGCAATGTCGTCGCTGCCAAGAGAAATTCGATACGAAGCACGAATGGATCACACACAAAGTGAACGATGCGCGTGTCACGAAACCATTCGGACCCTTCCAGTGGGGCTGTGACCTGTGCGGTGCCTATGTTTCGCGCAAAGAGAAGCTAATCAATCACATACACAATCACCTGAAGGAGAAGGAGATTGTGCCGGTGGAGGATCGGACACATGATCAGAATCAGAATCGTGCGGTGAAGCCAAAACCAGCGACGACCGCGGGTGTGGTGGCGCCGATGACTATTAAATTGAGTGATGGTGAGGTGAAGGTGAAGCAAGAACGCGACAGCGATGAAGAGAAGGAAGATTTGCATGACGGTGTGCTGAAGGGAGAGGATGAGGAGTCCGAAGAGGAGGATGTCGGCGGTGAGGTGGATGGTGAAGTGGAGGAAGATGAAACGACACACCACAGTGTTAGTGCGGCGCGTCGTTCCGGTATGGACACAGATGACGAAGTCGATGAGGATGCTTCCGAAGAGGATGCAGACGCGGACGCGGACGAGGATGAAGAATATGAAGTTATGCCAGCGACTATGAATGAGCAGACCGACGGTGAGGTGGCGGAAGCGGAAGAGGATGACGCCGATGATGCCGAAGACGGTGCGGAAGATGCAGACGAAGGCGAAGACGTGGATATCGATAATGAAGAAGACTCCAACGATCGCACGATTACCGCACCAAATGGCCGCAGTTATGCGCGCGTGCCACCGGCCACAACACAGGTCACCATCGAACCGAATCGCATATCGACAGATACAACCGAAGACTCGTCGCCGTCGTACGATgaggatgacgatgatgatAACGACAATGATTCGGATGATGACAGTGATGCGGAGAGCGGCGATAGCTCATCGCAGGCATCGAAGACACCGGCACCGGCGCCGAAAGCACGCTTTTCGTGCGATCTCTGTCGCGTCTTCTTCGATTCGCAACAGGAGCTGCAGAAGCATGTGAAAATGCATTTCCTTAACGGACCCGGCTCGGTGTCGCTAACCGAAATCAAGCCAAAGACGGGCAACAAGTcgagccgcagcagcagcagcgacgtGGTGGCGGTGTAG
- Protein Sequence
- MSDGSPVRARQNCCRLCLAPGSECISILNSYAADKEPLATKIQNCVSIKINPEDHLSLRICHACISYLNSWQSFKNRCLASQSKQRSWLDTNKRQQLLDNNVSISTIGADGTGQQQQHQADDSEQHNAPSLASSILDGISSLKKRKSLTVYPLPAVEIKDEPMDPDDEYNTKQHDESDDMVDPTLFLERTEEEGDESLMEHMPYQYEQPRPPIELAPLLDTKEASCRACNLKFSTRANARRHERNLHPNLFELSTSTPNNMPVTKPTPALAAALELQRATAAAVAAAEASNAASGMITPLKYRQQIVNAFNKCEIGGFDYEHPEKYQHHLTDEKIVFLQQNDEFLRQYQNMTCRCCNKTYSTYKNFMAHMRKKYLALPRNLCFNCLKLNDSKALFISHLKRRNCINLYKVLHALMAKDSNFAAAVTATAAAVPDKLRAKELLVNKMYECKLCPQKYRLKLEFRSHVYDEHADMQRKDTMQKQCCYCGLELDDPAERKRHYNNMDCIVSLRCVTCDAKFDNHQKFLDHVYEKHLAGFGEQMSTSSLNASAISTENSPAKKSTVGLGGASSTDESRSSHQAASVNQPKSQYFSRMPQACPICDQQYNNYNNVLRHMESKHPDQLPQTYKCVKCGIGYPRLSNLREHMVSAHSADKARHTGFEYIVNADAVKIAYGTQQNVYTGRYDYVMKDLMSITNGGSIADDDENSSENPAKKMRTDTGAAVTTSTGSGGSGGNMYSSLKECPICNAVFSNNIGLSNHMRSHSAAAQNNSLTPGAISASKSAPSGLTITPAPPAKSTTPPAMQHQTAVQKAIFKRSLEQAADRRFRRMRCRLCQRRFSSKKSYRFHMLNDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDEMIEKQFECDICSIVYRSEPQLQHHKKTVHGSAVGGADQADTTFDDSLAGGAGGADVSAAANPADRSGLSTPVSSVGAERSTLDNSTSGPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQFPEPSECVLCKKVFFDSQMLENHIPTCNRKPINASAAVAESAGPPPIYKHKTGDDDDDASHDASGVITTSALGGGELEITPIPASGMKIKLPEVACTICGQRFTDQELFAKHIQMHEMELYTDNPLAAMFDTGPADPNQFYLDRVNDNGEYACDLCNKTFTQMTALKVHRKWHFRGDSKQNQADGDLSANAAANHLSQIQINHQHPPGLQAVGLMPNPHHHSSKSQKRKRELKCEYCPSTFISNNNLRRHIYELHKEEIGNLPVPPKINTDPYLQCRRCQEKFDTKHEWITHKVNDARVTKPFGPFQWGCDLCGAYVSRKEKLINHIHNHLKEKEIVPVEDRTHDQNQNRAVKPKPATTAGVVAPMTIKLSDGEVKVKQERDSDEEKEDLHDGVLKGEDEESEEEDVGGEVDGEVEEDETTHHSVSAARRSGMDTDDEVDEDASEEDADADADEDEEYEVMPATMNEQTDGEVAEAEEDDADDAEDGAEDADEGEDVDIDNEEDSNDRTITAPNGRSYARVPPATTQVTIEPNRISTDTTEDSSPSYDEDDDDDNDNDSDDDSDAESGDSSSQASKTPAPAPKARFSCDLCRVFFDSQQELQKHVKMHFLNGPGSVSLTEIKPKTGNKSSRSSSSDVVAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00303948;
- 90% Identity
- iTF_00191500;
- 80% Identity
- -