Basic Information

Gene Symbol
wek
Assembly
GCA_000789215.2
Location
NW:1641258-1645569[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 4e-06 0.00023 20.9 1.7 1 23 193 216 193 216 0.97
2 16 0.00013 0.0071 16.2 3.8 1 23 222 245 222 245 0.97
3 16 5e-05 0.0028 17.5 3.5 1 23 255 277 255 277 0.97
4 16 2e-05 0.0011 18.8 0.1 2 23 285 306 285 306 0.97
5 16 0.23 13 5.9 0.1 2 23 313 335 312 335 0.85
6 16 0.01 0.57 10.2 3.2 1 23 341 363 341 363 0.87
7 16 4.6e-05 0.0026 17.6 0.5 1 23 369 391 369 391 0.96
8 16 0.00088 0.05 13.6 2.9 1 23 724 747 724 747 0.98
9 16 0.0024 0.14 12.2 0.4 1 23 754 777 754 777 0.96
10 16 0.14 8.1 6.6 0.3 1 23 784 809 784 809 0.94
11 16 5.3e-06 0.0003 20.6 0.5 1 23 818 841 818 841 0.96
12 16 0.0013 0.075 13.0 2.3 1 23 857 880 857 880 0.94
13 16 0.00051 0.029 14.3 0.2 1 23 886 908 886 908 0.98
14 16 1.7e-05 0.00094 19.0 0.3 2 23 914 936 913 936 0.93
15 16 0.0019 0.11 12.5 5.4 1 23 942 964 942 964 0.96
16 16 3.9e-06 0.00022 21.0 0.8 1 23 970 992 970 992 0.98

Sequence Information

Coding Sequence
GCTAATACAGACGGGTTTTCTGGCAATGTTGATCAAGACGATATACCGGATAGCAAGGAGCTACAATTTAACATTTATAGCGATCCTGAGCTGCAACAactgatatatatgtacatagatggcCCTAGCAGAAGTAACACGGCAAATGTCGTTGATAATGAATTGCCAGCACATATATGCCTCGCTTGCTACAGTTTGCTCAACAACTTTGCCTTATTCCGTAAAAGGGCTCAACAGAGCGCCGAAAAATTACGCACTGTACTGAATTGTAGTAGTGGCATGATAAAAGTTGAAATCAACTATGACGAAgatgaaaatcaatttatggAGAAAAAAGAACGTGTGGAAAACTTGGTTCAGGATTGCAAATTGCAATTTAGGGATGCGCTTATGGAAGACGAGCAGGTTTTTTTCGATACATCGGTTGCAAACTTAGCAGACACAGAACTAAATGATGAGATGGCAGATCCATTTGCACCTGCATTACAAACGGCTGTCGATTGTGACAGTAAAACAGTCGCTGGAAAGAAGGACGACATCAAGAAAGAAGAGCCAACATTAGAAAACAGCGACAAGTATAAATGTACACACTGCACCCAGACGTATGCTTTCAATTCAGAATTGCAAGCACATATGCGGGAAGCGCATGATAATAAGTTGCCGTTTACGTGTACTCATTGCGACAAAGCCTACAGATATATTCGCAGTCTACAGGAACATATGAAGCAAAAACATCAAACAGTACTAAATGCAGACGCCCAGTTTAAGTGCAATGTGTGCCCAAAGGCATTCACAACAGATTTGTCACTAAAAAAACATATGTGTTTTCATATTAAAGAAGATATGTCTCGTGTTTGTGGAATTTGTGGTAAACGATTTCCGgtaaaaaatttgcttgtagATCATTTACGCACACATTCGACAGATGGCCGAATACCTTGTGGTCAGTGTGATAAAAGTTTTATGTGGTATCAAGATCTATTGAATCATGAACTTTCGGCACATCTGAAAGAGAAACCATTTCCCTGTAAACTTTGTGATAAATCATTTCAAACGCAAAAGTCCCTACGCTTCCACAATTACCGACATTCTGGAGAAAAACCATATCTTTGTGACGTTTGTGGAAAGGACTTCCGCCAACCAACGGCTATGAAACAACACCGGCTGAAACATTTTAAAGATGATACGGTTGAAAAAAAGCTAGATgttaataattgtaaaatgtcGGCACTATCAATAACAAATGTAAAGGAGCATTGCCGAACttgcttgaaaaaattgaaaagaaagaatattaattgttcaataaatttagaGGAGGAAGAAGAACTTTTCGACTGTAAAGATTTTTGTATTAGCATTATAGGTAATGAGTTAATACAGCAATTTATCACTTCATGTATGGAAGGACAGTGGACTAGTGAAGAAGCGAAAACGATGTCTCAAGAATATCCgcaatatatgtgcatatattgcTATAAGAAATTACAAGGTGTTGTGTCATTCAAAAAACAAGTGAGAAATAGTACACAAAAGTTGCAAGAATTACTTTGCCGAAATGCACCTAAAGCTGAAATTGTTCATGATGAAGAAAACCAGGAAATGGACAACAATAGTTGTGTAGAACAATCCACAACAAATATCTTTACTTTGTTGCTTAAAGATACTCTTATGGAAACGGAATCAGTTATGATAAATGCTGTGAATGATGTAGCAATAATGAGCAAAGAATCACCTGATCCAGATCCATTTGATAATGATCCATCGGTTgatattgcaaaaaaagaaaatttgaacgaTGATTATTGCGAAAGCAGTAGTGAAGAATGGCATGATTTAAACGGGGAACACTCCAACGAAGGAATATTTGAACGAACTACAGATCATGATAAAGTAAACTTACAAAATAATGTCAAATCATCGACTGCAGTGGAAGGTAAAGCTCAGCTAAACCAACGCAGCGATTGtagtttggaaataaaaaagtatccTACCCGCTCCCGTAGAAAAGGTTCTCTACCGATTGAAAATACTATTACTGAAAACACAAAtgacaataaaacaaaatgtacaaAAGTGGGGAAAGTTGGTGGGCGCATTCAATTAGGTCTACGCACAGACCATTTGGATATAACGACGAAGCGTCGTAATAAAGGAACTAAGAACAGTTTCAAATGCGTGCAATGTAGTCACAGCTTTGCACACAAAATAACACTGGATGCTCATATACGCAAAGTACACGAAGGAAGTAAGCGTCCATTTCAATGTGATCGTTGCGAAAAATCGTACACATTTATTGGTGGACTTTATACGCATATCAAGGAAATACATGATGCTGAGGTTAGATCGTATGCTTGTGATATTTCAGGATGTGAGCGTATATATACCAGTTTTATAGCAATGCAAAAGCATAAACGTTTAAAGCACTCTGATACAACGTGTTTAACCAAATACGTGTGTGAACAATGCGGTGCGACCTTTAATCAATCGGGTAATCTTAAATACCATCGGCGTGCAAAACATCCTACGGAAGCGGAACAAgctgaaaaagagaaaatgaaagAGCGTTTCGAATGTGATATCTGCAAAAAACTCTTCTATTCCCGTTACACATTGAAATATCATACCCTGCAGCTGCATACCAACGAGACGAAATATGAATGTAATATTTGCGGTCGACGAATGGCTAAGAAATTTATGCTTGTCCAACATATGCTAGTTCATTCTAATGACAAAATGCCATGCGAACACTGTGGTAAACAATTTATACGGAAATTTGAATTGGAGGCCCATGTAAAAGCGGTACATATGAAATTGAAACCGTTTGAATGTCAGTATTGTTCCGAATGTTTTGCTTCGCGGAAAACGCTACGCCAtcatgaatatatacatacagggGAGAAACCCTATGTCTGTGATGTCTGTGGACAAGCATATCGACAACAAACCTCCTTAAAAAGCCATCGAAAATCGCACGAAAAATTCGTTGCGGAATCAAAGTCAATGAATGTTAATCAGGagttaattaattcatttttgataCTACAGCCTCATACAACTCCACACAGCTCGTAG
Protein Sequence
ANTDGFSGNVDQDDIPDSKELQFNIYSDPELQQLIYMYIDGPSRSNTANVVDNELPAHICLACYSLLNNFALFRKRAQQSAEKLRTVLNCSSGMIKVEINYDEDENQFMEKKERVENLVQDCKLQFRDALMEDEQVFFDTSVANLADTELNDEMADPFAPALQTAVDCDSKTVAGKKDDIKKEEPTLENSDKYKCTHCTQTYAFNSELQAHMREAHDNKLPFTCTHCDKAYRYIRSLQEHMKQKHQTVLNADAQFKCNVCPKAFTTDLSLKKHMCFHIKEDMSRVCGICGKRFPVKNLLVDHLRTHSTDGRIPCGQCDKSFMWYQDLLNHELSAHLKEKPFPCKLCDKSFQTQKSLRFHNYRHSGEKPYLCDVCGKDFRQPTAMKQHRLKHFKDDTVEKKLDVNNCKMSALSITNVKEHCRTCLKKLKRKNINCSINLEEEEELFDCKDFCISIIGNELIQQFITSCMEGQWTSEEAKTMSQEYPQYMCIYCYKKLQGVVSFKKQVRNSTQKLQELLCRNAPKAEIVHDEENQEMDNNSCVEQSTTNIFTLLLKDTLMETESVMINAVNDVAIMSKESPDPDPFDNDPSVDIAKKENLNDDYCESSSEEWHDLNGEHSNEGIFERTTDHDKVNLQNNVKSSTAVEGKAQLNQRSDCSLEIKKYPTRSRRKGSLPIENTITENTNDNKTKCTKVGKVGGRIQLGLRTDHLDITTKRRNKGTKNSFKCVQCSHSFAHKITLDAHIRKVHEGSKRPFQCDRCEKSYTFIGGLYTHIKEIHDAEVRSYACDISGCERIYTSFIAMQKHKRLKHSDTTCLTKYVCEQCGATFNQSGNLKYHRRAKHPTEAEQAEKEKMKERFECDICKKLFYSRYTLKYHTLQLHTNETKYECNICGRRMAKKFMLVQHMLVHSNDKMPCEHCGKQFIRKFELEAHVKAVHMKLKPFECQYCSECFASRKTLRHHEYIHTGEKPYVCDVCGQAYRQQTSLKSHRKSHEKFVAESKSMNVNQELINSFLILQPHTTPHSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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