Basic Information

Insect: Bactrocera dorsalis
Gene Symbol: -
Assembly: GCA_000789215.2
Location: NW:831551-840189[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.00011 0.006 16.5 0.9 1 23 160 183 160 183 0.97

2 24 0.019 1.1 9.4 2.5 2 19 197 214 196 219 0.89

3 24 0.00017 0.0095 15.9 6.6 2 23 223 244 222 244 0.97

4 24 0.00026 0.015 15.2 2.9 1 23 252 276 252 276 0.97

5 24 0.00014 0.008 16.1 0.7 1 23 282 304 282 304 0.98

6 24 2.6e-05 0.0015 18.4 0.7 1 23 310 332 310 332 0.96

7 24 0.0008 0.045 13.7 3.6 1 23 338 360 338 360 0.91

8 24 6.3e-05 0.0036 17.2 0.1 1 23 366 388 366 388 0.99

9 24 0.016 0.9 9.6 2.8 1 23 783 806 783 806 0.97

10 24 0.0013 0.074 13.0 0.5 1 23 812 835 812 835 0.98

11 24 1.6e-05 0.00091 19.0 1.2 1 23 838 860 838 860 0.98

12 24 3e-05 0.0017 18.2 0.4 1 23 866 890 866 890 0.96

13 24 1.8e-05 0.001 18.9 0.3 1 23 896 918 896 918 0.98

14 24 0.00069 0.039 13.9 0.2 1 20 924 943 924 946 0.93

15 24 0.0018 0.1 12.6 5.6 1 23 952 974 952 974 0.96

16 24 0.00037 0.021 14.8 0.0 1 23 980 1002 980 1002 0.98

17 24 0.0097 0.55 10.3 3.2 1 23 1201 1224 1201 1224 0.95

18 24 0.0006 0.034 14.1 2.1 1 20 1238 1257 1238 1260 0.94

19 24 1.8e-06 0.0001 22.1 0.5 3 23 1265 1285 1263 1285 0.96

20 24 0.00073 0.041 13.8 1.9 1 23 1291 1313 1291 1313 0.98

21 24 0.00015 0.0087 16.0 2.2 2 23 1320 1341 1319 1341 0.97

22 24 0.00019 0.011 15.7 0.5 2 23 1348 1369 1348 1369 0.97

23 24 0.00048 0.027 14.4 1.6 1 23 1375 1397 1375 1397 0.96

24 24 3.2e-08 1.8e-06 27.5 0.6 1 23 1403 1425 1403 1425 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.00011	0.006	16.5	0.9	1	23	160	183	160	183	0.97
2	24	0.019	1.1	9.4	2.5	2	19	197	214	196	219	0.89
3	24	0.00017	0.0095	15.9	6.6	2	23	223	244	222	244	0.97
4	24	0.00026	0.015	15.2	2.9	1	23	252	276	252	276	0.97
5	24	0.00014	0.008	16.1	0.7	1	23	282	304	282	304	0.98
6	24	2.6e-05	0.0015	18.4	0.7	1	23	310	332	310	332	0.96
7	24	0.0008	0.045	13.7	3.6	1	23	338	360	338	360	0.91
8	24	6.3e-05	0.0036	17.2	0.1	1	23	366	388	366	388	0.99
9	24	0.016	0.9	9.6	2.8	1	23	783	806	783	806	0.97
10	24	0.0013	0.074	13.0	0.5	1	23	812	835	812	835	0.98
11	24	1.6e-05	0.00091	19.0	1.2	1	23	838	860	838	860	0.98
12	24	3e-05	0.0017	18.2	0.4	1	23	866	890	866	890	0.96
13	24	1.8e-05	0.001	18.9	0.3	1	23	896	918	896	918	0.98
14	24	0.00069	0.039	13.9	0.2	1	20	924	943	924	946	0.93
15	24	0.0018	0.1	12.6	5.6	1	23	952	974	952	974	0.96
16	24	0.00037	0.021	14.8	0.0	1	23	980	1002	980	1002	0.98
17	24	0.0097	0.55	10.3	3.2	1	23	1201	1224	1201	1224	0.95
18	24	0.0006	0.034	14.1	2.1	1	20	1238	1257	1238	1260	0.94
19	24	1.8e-06	0.0001	22.1	0.5	3	23	1265	1285	1263	1285	0.96
20	24	0.00073	0.041	13.8	1.9	1	23	1291	1313	1291	1313	0.98
21	24	0.00015	0.0087	16.0	2.2	2	23	1320	1341	1319	1341	0.97
22	24	0.00019	0.011	15.7	0.5	2	23	1348	1369	1348	1369	0.97
23	24	0.00048	0.027	14.4	1.6	1	23	1375	1397	1375	1397	0.96
24	24	3.2e-08	1.8e-06	27.5	0.6	1	23	1403	1425	1403	1425	0.98

Sequence Information

Coding Sequence: ATGCTCAAATTATTACCAAGCAAAGCATTTgacaaaagtgaaaatgcaaaatgtgGTGAAATTTTTTGTCACAGTTCAACAGAATTTACCATTATTTGTACACTGTGCGAACTCAAAGCATTCGACTACCAGGATTTCTTGCTTCACTGCAAGAATGAACACCTCGAAAAGGACTTATTGAAAACAgaagaaatatttgttgaagAAGCACCATACCTGGCGTCAAATGTGAAGGATGAACCAATTTTTGAGGATACTATTGCTGAAGCTGAATTTCTAGATGAGCACGACTTTATCATTCCGGATGAGGAAAAGTCAGGGTTACGTATAAGTCAATGGAGTGAGAATAAGTCGTTATCTGATGGTTCAGACAGTGATACTGAACATAATTTTGAATCTAATATTGATGACAAAGATTATGTACCACCTGTACATCAACGAAAGCGAAACAAAAAGCGTGAACATCAAACAGAGTCATACAAATGTGAAATATGTTCCCGTATCTATAAAAGCTCCAATTATCTGCGTTCACATTtggcaaaaattcataattttaaaagtgaGGAAATAGCGACTATTCAACTTCAGAAATGTGATGAATGCACAGAAGAATTTAAAACATTACGAAGTTTAGAGAAGCATTGCCTTTCGGAACATGGTGGTATGAAATGTATGCATTGTGATAAACGATGTACATCGCGAACAAATCTGTTACGACATATGGAAACTCATTCCCATGGAACGGACCGACGGTTCGTCTGCGATTATGAGAACTGTAATAAAAGTTTCTTTACACGCCGTCAGTACCAAGCTCACAAACGCACCCATACAAAAGGAAAGAATTTCATATGTGACATATGTGGCTACTCGTGTCGAATACCGGAAATGCTTAAAGTGCATTATCGTTCACATACAGGTGAGAAACCGTATGCTTGTGATGAATGCGGCAAATGTTTTGTATCTAAATCGGCTGTTAGGGAGCATAAAGCATCGCATGGCACAGAGCGACCACATGAATGTAAAGTATGTGGACGCTCATTTGCAAGAGCTAAATCGCTATACCATCATAATTTTTTGCATCTCGAAGAAAAGAAGTTTAAATGCAAATTGTGTGGACAAGCATATGCGCAGCTTGCGGGTTTAGCTGGTCACATGAGACGACACCGGGAGCAGGGTCATTGTatagaGATTAGTAATATACTCAACTGTGCGCATGTGAAATTACATTTCAAACAAACGCAAAGTACAGTTTACGTTGTAAAAGGCAGTAACGACTGCCCACTCCGCCTTACAGTGAGTACtgctattaaattaatttgtagtggccaatatgcaaatattgaatCGTTAACTCAATTCAAAAACCTGCATGAGGGCTTTGTTCGTATAGTGTTGCTCATTTCAAAAGGAGCTTGTGAAACAACTTCATTGGAGAACGACAACACTAATTTTGAAAGTGATAGTGATAGCGATGCACCATGTACATCTCAATGGGCACTAAATCGCGAACAGCGACGTAAACAGCGTCAGCTACGTAACTCGCATTTATTACAAAGGCAGCAGCAACTATTCCATAGGGTGGAGGCACTCCGCGATTTCCGGTATAGTCCGGAATCGATCGAATACACTATTGATTCAGgtgcaaagaaaaaaagtagtGTTTACGAATTCCAGGTGAAATTTCACACGAACATCGATTACATCTTGCGTCAGCCCGAAATATCCCGAGACGGATTTACCGGAAATTGGATGGAGTTTATAACAACGAAATTGAATGGTGCTATGAATCGAGAaaaaatgATGCGGAATTGCACATTACCAACAAGTTATGAACAAAATAGAACCAGTATACGTTGTGGCGAAATAATTTGTTATGATAACGCGAATTTCACTATAATTTGTGTTCTTTGCAAAATGAAACTGTTCGAGTTTGACGATTTTATGTTACATTACCAAAATGTACACCTTCGAGGCAATATACACGACAGTGATAGTGATAACGACGCGGACGGTGAATTGGAAGAATGTATTAAAGATGAGGagtttgaaaatgttgaataCCTAGCTGAATTGGATGAATGTGGTGCAAAAGTGGAAACTGCCGTGCAACATGCACGTGTTTTGGAACAAGTCGTTTCCAACGACAAACAAAATTTACCCATCAAAGCAGAAATGATAGAAACGGCTGATAATGATACGATCAGCGAATATGGTGAAGTTTTGCTTGTTGATAATGTTAAACCGAACGAGATCGAAAATGAAGAATTTGATGGTGATGAATGGGCAGATAGTCAAGGAGGGGATGATGATAACCACATTTTAAAAAAGccTAGGAAGCCCAAAGAGTACTCATGTGCACATTGCCAAAAACGTTATACCACAGAACGTATATTGAAGCTGCATATAAACATGAAACACCTGCGAccaaaaaacttcaaatgcgACCAATGCCAAGAAGAATTTGTAGAGCAACGTTCCTTAGATTCACATGTGCGGAAAGAACACATAGGTTTTCAGTGTTCACAATGCGAGCGTGCTTATAAAAACTCTCGTTCACTGCGCATACATATGAAAGCACACAAGGGTATAAAGGAATTTATAtgtgattttgaaaattgtggCAAAGCATTTATTACTTCATCACGTCTGAAAGTGCACCAAAAAATTCATACTGATGAACGAAACTACATATGCGAAATTTGTGGTTATCGTACACGACAAAAGGATGCTTTGGTTgtacacaagcgcacacacaccgGAGAAAAACCTTTTGAGTGTTCTATTTGTAGTCGACGTTTTATCTCTGCCTCATTGTTAAACGAGCACAAGCCTATGCATTCTACTGAGCGTCCACATAAATGTGATGTATGCGGTGCATCATTTTCACGGAGCAAAGCGCTCTACCATCACAAACATTTGCACCTGGgtattaaaaagtttgtttgCAAATTATGTGGTCGTGCCTATGCGCAGATGGCAGGACTAGCGGGGCATATGCGACAACACAAAGCAGAGGAACAAAGTTTacttagtTTCTCATCAATATTAAACACGAAAATGTTAAAACTTTTGCCACCGGATACGagcaaatttcataattttaaatgtggAGAAATATTTTGTCTCAGCTCCAATAACTACAATGTGGCGTGCTGTTTATGCGGAGCGAACGTAGCGTTTGAACAATTTCCACAACATTTTCAAGAAGAACATTTAACGCCCAAACccgaaaaagtggaaaaacccACCTTAGATACAAGTACAAGTGACAGCATTAAAATTGATGTAGATCCCATCAAAAGCGAAGAAGAATATCTTAGTGACCACGGTGAAGGTTCAGTCGGTTATGAAGCTCCAGATTCGGAACCCGAAGAAGTAGTTGATGAAAAGCCTTTCCACTTTGTCGACTTACAAAATCTAGGAGTAAACATAGTTGAACCAGAAAACAaacgtaaaaagaaaaaagttgaagatGTTGACGACATCAGTGACACTAAGTCGTCGGAGGATAAGAGTGATGTCGAAGATGAAGATTGGCGACCTCAAGATTCGTCGGGCGACGAGAAGCCAAAACCGCAAGATGATATTGATTCACTTCCATATCCATGTCCAGACTGTATGCGTTCGTATAAAACCAAACGCAGCATGCTAACGCATCATCGACAAACAcataatccaaaaataaaaaaaccgaaaGAACCAAAGTTGAATTTCAAATGCGATGAATGTGGCGAATGTTTTAAAGCTGAAAGAAATCTACGTGCCCACAAGTGGAAGCATACTGGCATAATATGTgatatttgtggaaaaaaattctCTCAAACTGGTAACCTGCAACGACATAAAATACGTCACACCGGCATAAAGGCGCACAAATGTCAGGAGTGCGGCAATGACTTCTTCACTGATAAAGAGCTAAAAGCACACATGTTGCGACATACCGGCGAGAGGCCGGTTGTTTGTGAGATATGCGGAAAACGGTGTCGTGATCATGGCGTATACAAAGCGCATATGCGACGACACACAGGTGAACGACCAGCAAAATGCGACGTTTGCGGTAAAGCTTTTTACAGTTTCCACGATTTAAATGTGCACGCGGTGACACACAGTAGTGCACGCCCATTTGCATGTGACATGTGTGGCTCAACGTTCCAGCGAAAGAAATCACTACGCgtacacaaaaaattacattctaAAGATCGGAAGCATGAATGCAAAGTTTGCGGTAAAACATTCGCACAATCCGGTGGTTTGAATGCGCATATGCGAACCCACGATGCCGCATTAAGTAGGAGCATTGTAGGCAATACCTCCGCCAGTATTAGCGCTATACCTGGCCCTATAGTTGCAGATGGTGTTGGTGTCGGTGTCGGTGTGAATGTTGGTGGCACTACTGTCAATATGGGCCTTGCTAGCGGTGTTGGTGTGGCACTTGGTACGGTAGTCGATCCAGTTAACTCAATAGGGGAGGCATTGTTAGGTGTGACTGGTGTGCTGAGTGGGACCGGCTCAACAGTAGATACTGTCAACAATtag
Protein Sequence: MLKLLPSKAFDKSENAKCGEIFCHSSTEFTIICTLCELKAFDYQDFLLHCKNEHLEKDLLKTEEIFVEEAPYLASNVKDEPIFEDTIAEAEFLDEHDFIIPDEEKSGLRISQWSENKSLSDGSDSDTEHNFESNIDDKDYVPPVHQRKRNKKREHQTESYKCEICSRIYKSSNYLRSHLAKIHNFKSEEIATIQLQKCDECTEEFKTLRSLEKHCLSEHGGMKCMHCDKRCTSRTNLLRHMETHSHGTDRRFVCDYENCNKSFFTRRQYQAHKRTHTKGKNFICDICGYSCRIPEMLKVHYRSHTGEKPYACDECGKCFVSKSAVREHKASHGTERPHECKVCGRSFARAKSLYHHNFLHLEEKKFKCKLCGQAYAQLAGLAGHMRRHREQGHCIEISNILNCAHVKLHFKQTQSTVYVVKGSNDCPLRLTVSTAIKLICSGQYANIESLTQFKNLHEGFVRIVLLISKGACETTSLENDNTNFESDSDSDAPCTSQWALNREQRRKQRQLRNSHLLQRQQQLFHRVEALRDFRYSPESIEYTIDSGAKKKSSVYEFQVKFHTNIDYILRQPEISRDGFTGNWMEFITTKLNGAMNREKMMRNCTLPTSYEQNRTSIRCGEIICYDNANFTIICVLCKMKLFEFDDFMLHYQNVHLRGNIHDSDSDNDADGELEECIKDEEFENVEYLAELDECGAKVETAVQHARVLEQVVSNDKQNLPIKAEMIETADNDTISEYGEVLLVDNVKPNEIENEEFDGDEWADSQGGDDDNHILKKPRKPKEYSCAHCQKRYTTERILKLHINMKHLRPKNFKCDQCQEEFVEQRSLDSHVRKEHIGFQCSQCERAYKNSRSLRIHMKAHKGIKEFICDFENCGKAFITSSRLKVHQKIHTDERNYICEICGYRTRQKDALVVHKRTHTGEKPFECSICSRRFISASLLNEHKPMHSTERPHKCDVCGASFSRSKALYHHKHLHLGIKKFVCKLCGRAYAQMAGLAGHMRQHKAEEQSLLSFSSILNTKMLKLLPPDTSKFHNFKCGEIFCLSSNNYNVACCLCGANVAFEQFPQHFQEEHLTPKPEKVEKPTLDTSTSDSIKIDVDPIKSEEEYLSDHGEGSVGYEAPDSEPEEVVDEKPFHFVDLQNLGVNIVEPENKRKKKKVEDVDDISDTKSSEDKSDVEDEDWRPQDSSGDEKPKPQDDIDSLPYPCPDCMRSYKTKRSMLTHHRQTHNPKIKKPKEPKLNFKCDECGECFKAERNLRAHKWKHTGIICDICGKKFSQTGNLQRHKIRHTGIKAHKCQECGNDFFTDKELKAHMLRHTGERPVVCEICGKRCRDHGVYKAHMRRHTGERPAKCDVCGKAFYSFHDLNVHAVTHSSARPFACDMCGSTFQRKKSLRVHKKLHSKDRKHECKVCGKTFAQSGGLNAHMRTHDAALSRSIVGNTSASISAIPGPIVADGVGVGVGVNVGGTTVNMGLASGVGVALGTVVDPVNSIGEALLGVTGVLSGTGSTVDTVNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -