Basic Information

Insect: Bactrocera correcta
Gene Symbol: -
Assembly: GCA_027475135.1
Location: CM050325.1:4481824-4483963[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0027 0.31 12.3 0.1 2 23 290 312 289 312 0.95

2 10 0.0012 0.14 13.4 4.9 1 23 319 342 319 342 0.94

3 10 0.01 1.2 10.5 0.1 1 23 348 373 348 373 0.93

4 10 0.0012 0.14 13.4 5.9 1 23 400 422 400 422 0.97

5 10 0.0032 0.37 12.0 0.4 1 23 428 450 428 450 0.97

6 10 0.00012 0.014 16.5 0.8 1 23 457 480 457 480 0.98

7 10 0.84 97 4.4 2.8 1 17 486 502 486 508 0.77

8 10 9.3e-05 0.011 16.9 1.9 1 23 514 536 514 536 0.98

9 10 0.0008 0.093 13.9 3.2 1 23 543 565 543 565 0.97

10 10 0.056 6.5 8.1 0.9 1 23 571 593 571 593 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0027	0.31	12.3	0.1	2	23	290	312	289	312	0.95
2	10	0.0012	0.14	13.4	4.9	1	23	319	342	319	342	0.94
3	10	0.01	1.2	10.5	0.1	1	23	348	373	348	373	0.93
4	10	0.0012	0.14	13.4	5.9	1	23	400	422	400	422	0.97
5	10	0.0032	0.37	12.0	0.4	1	23	428	450	428	450	0.97
6	10	0.00012	0.014	16.5	0.8	1	23	457	480	457	480	0.98
7	10	0.84	97	4.4	2.8	1	17	486	502	486	508	0.77
8	10	9.3e-05	0.011	16.9	1.9	1	23	514	536	514	536	0.98
9	10	0.0008	0.093	13.9	3.2	1	23	543	565	543	565	0.97
10	10	0.056	6.5	8.1	0.9	1	23	571	593	571	593	0.96

Sequence Information

Coding Sequence: ATGAATAATCAGCTTACGCGCAATAATTTGCAAGAATTTTGCCGAACCTGCTTAAGCAGTTTGCAAAAACGTCGCAGACGTGAGAAGGAGGATACGCCTACTAGTTTTCACCAACTGAAGGTTAAGGTTAATCAAGGAGATAACGAAAATGATTCTGAAACAAATCATAGTTATAATCTTAGTTTGCTACCGCAATTGCAAAAATTATTCATGTTATTTACTTCCTTGGAAATATCGGAGGATAGCGATGAAGATGTTTACCCACGAAGTCTCTGTCAACTATGCTATGAAAAAATGATTGATTTCCAAGAGTTTCGAAACTTGGCCATTAATTCTGCGGAAGTATTATACAAAATTGTTAATAGTTTGGATGATGAAACGTCCAAAACTTCTGCTGAATCACCAACGTTTCAAACAATTGAAATTACTAAAGAGATAAAAACGGAGACTGTAGTAAGGGAAAGAAACTACCAATTCAATGATGATGATGATGATGATCAGTTGCTTTTACCAGAACTAGCCCCATTGATGGAACGACCAATTAAAACAGAACCGGAAAACTATTATAAGTCAGAGTGTGAAACTATCTTACCAAATGATGATAATTCGGAAAATTCATCGAATGTTGTTGTAAAGCAAGAAATTGATTCGGAATACGAGGAAGATAATTCCCTATTCTATGAACGTAATGCACTAAGCGCAGCAGATAACTCAGTTAGTGATGATGCCGATGATGAGGAACATGCGTTGAGAAATGGTGCGGCCAATACGTCCAGTATGTCTCTTAATAACTCACCAATAACTGTAGGAGGAAGACAAAGGCTTAGTGCATCCTCCCGTAAACGCGATCGCAACAAAAAATCATTAAAGTGTCCTCGTTGTGATAAACAAGTCTATAAAAAAGTATACCTGGATGCTCACATTCGTGCTGTGCATGAAGGATTTGAGAAGCCGTTTCTTTGTTTGGAATGTCAAAAGGACTTTACACGCTACGAACATCTACATACGCATATTCAATCTAAGCACTTAATCAAACAACGATTTATATGTGGTTTAAATGGCTGCGATGCCGTTTTTAAGTTGAGCAATACCTTGGAGACTCATCGACAAGTCGTACATACAGCTACGTTTTCATATGGCCTAAAAGATATGTTAGAACTTCACCAATCCCAACTGAATGAAGAAGTAGAGATAAATCATATCTGTCAACACTGTTTCAAGACATACAGCTCAAAACGTGCACTCTCCGAACATTTGAAACGTCATGCCCAAATCAAGGATCACGTTTGTAAAGTATGTGGCGTTGCCAAAGTAACGCGCACGGAGTTATTAACGCATATGCGTATACATAAACCGAATCTCGAGAAATTCAAGTGCAGCATTTGTCCGCAGGAATTCAACCATAAAAATGCTATATCTCGCCATGTGCGTGTCGTACACGAGGGCCAACGACGCTTTCCATGCAGTTTTTGTCCCAAACGTTTTGGCACACGTAATTCGCAAGTATGCCATGAACGTCTACACACTGGCGAACGTCCGTTCAATTGTGAACTCTGTCACAAGCGGTACGCCCAAGTGGAAGGCCTCAAATCACATATGAAAAGTCATGATAAGAACTTGCGTACACATGTCTGCTCATTTTGTTCGCAACGTTTTATAACGAGAAAAAATCTAATTGATCATGAAAAGCGTCACCAAAGTGATAAACCCCATATATGTAACACCTGTAGTCGTGGCTTCTTTTCAATTGAAGATCTGGGTGTGCATAAGCAGTCGCATACGGAAGAAGAATTGCGTGAGATGGCGTGTAATGAATACGAGTTATATCAAGACACTGGCGATAGTCATGGAGAACACGTAATGGAAACCGAATCAATTAACGAACAAGGCAACCAGGCATATATGGGCTATAGCAGTTCGCAGAGTAGCAACTGA
Protein Sequence: MNNQLTRNNLQEFCRTCLSSLQKRRRREKEDTPTSFHQLKVKVNQGDNENDSETNHSYNLSLLPQLQKLFMLFTSLEISEDSDEDVYPRSLCQLCYEKMIDFQEFRNLAINSAEVLYKIVNSLDDETSKTSAESPTFQTIEITKEIKTETVVRERNYQFNDDDDDDQLLLPELAPLMERPIKTEPENYYKSECETILPNDDNSENSSNVVVKQEIDSEYEEDNSLFYERNALSAADNSVSDDADDEEHALRNGAANTSSMSLNNSPITVGGRQRLSASSRKRDRNKKSLKCPRCDKQVYKKVYLDAHIRAVHEGFEKPFLCLECQKDFTRYEHLHTHIQSKHLIKQRFICGLNGCDAVFKLSNTLETHRQVVHTATFSYGLKDMLELHQSQLNEEVEINHICQHCFKTYSSKRALSEHLKRHAQIKDHVCKVCGVAKVTRTELLTHMRIHKPNLEKFKCSICPQEFNHKNAISRHVRVVHEGQRRFPCSFCPKRFGTRNSQVCHERLHTGERPFNCELCHKRYAQVEGLKSHMKSHDKNLRTHVCSFCSQRFITRKNLIDHEKRHQSDKPHICNTCSRGFFSIEDLGVHKQSHTEEELREMACNEYELYQDTGDSHGEHVMETESINEQGNQAYMGYSSSQSSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00193065;
90% Identity: iTF_00193065;
80% Identity: -