Basic Information

Insect: Bactrocera correcta
Gene Symbol: -
Assembly: GCA_027475135.1
Location: CM050327.1:75123011-75133058[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0042 0.48 11.7 4.4 1 23 309 331 309 331 0.99

2 8 2.3e-06 0.00026 21.9 0.9 1 23 336 358 336 358 0.98

3 8 1.3e-07 1.5e-05 25.9 0.2 2 23 367 388 367 388 0.97

4 8 7.6e-07 8.7e-05 23.5 0.3 1 23 394 416 394 416 0.98

5 8 9.4e-08 1.1e-05 26.3 3.9 1 23 422 444 422 444 0.98

6 8 3.5e-07 4e-05 24.5 1.9 1 23 450 472 450 472 0.98

7 8 3.2e-06 0.00036 21.5 4.8 1 23 478 500 478 500 0.97

8 8 0.00025 0.029 15.5 0.5 1 21 506 528 506 529 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0042	0.48	11.7	4.4	1	23	309	331	309	331	0.99
2	8	2.3e-06	0.00026	21.9	0.9	1	23	336	358	336	358	0.98
3	8	1.3e-07	1.5e-05	25.9	0.2	2	23	367	388	367	388	0.97
4	8	7.6e-07	8.7e-05	23.5	0.3	1	23	394	416	394	416	0.98
5	8	9.4e-08	1.1e-05	26.3	3.9	1	23	422	444	422	444	0.98
6	8	3.5e-07	4e-05	24.5	1.9	1	23	450	472	450	472	0.98
7	8	3.2e-06	0.00036	21.5	4.8	1	23	478	500	478	500	0.97
8	8	0.00025	0.029	15.5	0.5	1	21	506	528	506	529	0.94

Sequence Information

Coding Sequence: ATGAACGATATTAGAATGGGCTTTAAGCATACCATGTTGCAACGATTACAAAACTACGAAGTGTATCCCTCCAAATCGGCAACCAGCGGTAATGGCTCTGAATCGGATGAAGAACATACGCCACAACTCGCACATGTCACCGACTTTAGTATCAGTCGGATACTTGGCGATGATGCGCGCAACAAGAGTGACATCGTCGTCAAAACTCCCGCAATCAGCGTCAAGTCGAACTTATCTGCACAATGCACTACAACACCATCGACCACCGATATACTCGACCTCTCTAAATCCTCACCAGCGGCGGAGCGAAAATCACCCATCGAGTCGCCACGTCAACCCGCCTATCCCACACCAACTTATCAGAGCTTTCACACAGACTTCTTGGCCGCTGCCGCCGCCGCGAATGCCACAAAATTTTATGCGCAATTCTTTCCTCATATGTTCGCTCCATACGCTTTGTCCGGCTTTAATGTGCCCGCTCCAGCACCTTACCAGAAACAACGTTACTTTGCACCGTATATCATTAACTCCAACTCAACGCACCCTATTCAACCCACTCAATCCGTCAACTCACGCTTGCCAATCTTGACAAATCCCTCTAGCATACCACTGTCGCCCCCGGCATCTAAGAATATTTGCCCACGCGCAAGTTGTACAGATTGTTTGGAATTCTATAAACAACACCCACTCTACAAGTCAACACTGCCGTCGGTACCTTCCTCGCCTGCATCGTCCACTTCATCTACTTGTCATTCTTCGTACAGCGCAAATTATTTGAAAACGAAGTCATCCACTGAATTACTACTCAAATCATCGACGATCGCTTTGACCACAGTAACGAATTTCAATTTGTCCTCGAAAACAACAAAACTCTGCACAAGTAGTCCGTCTTCTGTGACCACTTTGAACGCCGAGGAAATAAGCTATAAATGCTGTATCTGCGATAAAGTTTTCGGTTGCTCGCAAACGTTGCAGGCTCACGAAAAGACGCACAAATCGCCACGCTACGAGTGCACTGATTGCGGCAAAGGTTTTTCACAGCTTCGCAATTACAAGTATCACCTGTCTGTGCATCGCGGTACGAAGGAGTTCGCCGCCGAATGTCCGGAATGCGGTAAAACATTTAATGACAAAGGCTATCTTAGCAGTCACATGAAGATCCATCGCAACAAAAAGGAGTATGAATGCCCCTACTGCCCCAAATCGTTTAACCAGCGTGTAGCATTCAACATGCACGTACGCATACACACCGGCGTCAAGCCGCACAAGTGCGCAGAGTGTGGCAAACGCTTCTCACGGAAAATGCTACTCAAACAGCACATGCGCACCCACAGTGGCGAGAAGCCGTATCAGTGCTCGGTTTGCGGCAAATCATTCGCCGATCGCAGCAACATGACGCTGCACCATCGACTGCACTCCGGTATCAAACCATTCAATTGTCCCATTTGCCCGAAAGCATTCACCAAGAAGCATCACCTTAAGACACATCTTAACTATCATACCGGCTGCAAGCCGTACGTCTGCCCGCATCCGAACTGCAATCAGGCCTTCACGCAGTCTAGCAATATGCGTACGCATGCCAAGAAATGTCAATATCGTCCGCTGCAATTATCCTATCCGGTTGCGGCCGCGGCCGCGGCGAGTAGTGTATCAAATGTGACTTCATCAGCCTCCGCAATGACATTACCCACTCCAGCGACCGCATCATTAACACCAATTGTGTCACGTCTCAGCATTCCAGCGCCGCCAATAGTCAGTGGCATTGCAGGGACCGGTGTGACGACTGCGGCGGGTTTGTCAACGGCAGCAGCCTCGGCCAGCAGCGCAACGGCATCGTCACACATTCCAAATTTGTCCACAGCCCTAACGGCTGGCATGCGTATGCTGTCAGCTGTATCGGCAACAGGCGCTGTCACTCTGCCGAGTAACGGTACCGCATCCGGTGGCCACAATGTGGTCGCACAACAGCCGCTTTTACCATTTCCGCCTGCGCAACAGCCGTTAATGGGTACACTGCGACCGTTTTAA
Protein Sequence: MNDIRMGFKHTMLQRLQNYEVYPSKSATSGNGSESDEEHTPQLAHVTDFSISRILGDDARNKSDIVVKTPAISVKSNLSAQCTTTPSTTDILDLSKSSPAAERKSPIESPRQPAYPTPTYQSFHTDFLAAAAAANATKFYAQFFPHMFAPYALSGFNVPAPAPYQKQRYFAPYIINSNSTHPIQPTQSVNSRLPILTNPSSIPLSPPASKNICPRASCTDCLEFYKQHPLYKSTLPSVPSSPASSTSSTCHSSYSANYLKTKSSTELLLKSSTIALTTVTNFNLSSKTTKLCTSSPSSVTTLNAEEISYKCCICDKVFGCSQTLQAHEKTHKSPRYECTDCGKGFSQLRNYKYHLSVHRGTKEFAAECPECGKTFNDKGYLSSHMKIHRNKKEYECPYCPKSFNQRVAFNMHVRIHTGVKPHKCAECGKRFSRKMLLKQHMRTHSGEKPYQCSVCGKSFADRSNMTLHHRLHSGIKPFNCPICPKAFTKKHHLKTHLNYHTGCKPYVCPHPNCNQAFTQSSNMRTHAKKCQYRPLQLSYPVAAAAAASSVSNVTSSASAMTLPTPATASLTPIVSRLSIPAPPIVSGIAGTGVTTAAGLSTAAASASSATASSHIPNLSTALTAGMRMLSAVSATGAVTLPSNGTASGGHNVVAQQPLLPFPPAQQPLMGTLRPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00192966;
90% Identity: iTF_00193739;
80% Identity: -