Basic Information

Gene Symbol
TRERF1
Assembly
GCA_027475135.1
Location
CM050325.1:15413794-15436681[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.1e-09 3.6e-06 27.7 0.1 2 45 1688 1731 1687 1732 0.95

Sequence Information

Coding Sequence
ATGTGCAGCGCCTCTGTCGGCACCGAAGGTTCCGTTACGCTGCAATTGAGAGACTCGTCCGATTCCAATCAGTCGCCAGCTCAAACGTCTTTGGAAAATGCCTTGACCATCGGCTATCCCGACCCGGAGATGTTGGCCGACGTGTTCGGTTCACTGCAGACATCCTCATTCAAGAATCACAGCAGTGCGCTGGTGTCAACATCGCCAACAACAATAACAAATCATAATACTAATCCGATTAACAGTAATAGCAATATCTGCAACAACAACAACAGCAAACCCACAAAATCCCCGACCAGCGCCACGAGCAGTGCGCCGAGCAGCAGCAGCACCTCCACCACCACCTCCGCACCGGCGAACAAAGTCACAATCAGTCGTCGCAATCAAAGCAGCGTGCCAACAGCAGCAACAACAAGCGCCGCAACATCTGCCAATACAGCAACAACAACGGCGCACACGACAACCAAGTCATCCGTACAAACGGTGTCCACAGCCACGAACACCACCAACAAGACGACCAGCAGCTACGTCAAGAATTGCCTAATACGCAGCAGCAGTTGCAGCAACACCAACAACGTCACCTCGCTGGCACAGATAATGAGCAACAGCAGCACAAGCAGCTCATCGTCGCTACTGAATCATAGCAACACGAACAGCAACAGCAACTGCAGCAGCAACAGTAATTTCAGCTCGTCGAGCAGCAGCAACGACAGTATAGTCAGTGTCAACAGCAACAACAGCGGTGGCGGCGTGCTGAAGAGTGGCGGCAGCAGCAAAGTTGCCACGGCGGGCGGTGCGACGGGCGCGACGCTCAAGAAGAATCGCACCAAATTATCTTCTCCAACGCGTCATGGACCACAGCAGTGCCAGATCTGTAGCAAAATCTTTGGAAATGCGTCAGCATTGGCGAAGCACAAACTGACGCATAGCGACGAGCGGAAATACGTGTGTGCGATGTGTTCGAAGGCGTTTAAGCGACAAGATCACTTAAATGGCCACATGATGACACATCGCAACAAAAAACCCTATGAATGCAAAGCTGAGGGCTGCGGCAAATCATACTGCGATGCACGTTCCCTGCGCCGTCACACCGAGAACCATCATTCGGGCATAATAACACCACAAAATCAAACTCTATCGCCAACCTCCAGCACACCAAACGGACTTAGTCTTTCACCGGCCACAGCAAGTGGGGATGCCAGTTCACCGGACGGTGCCACATGCATACGCACTTACATCTCCACGGGTGGCAGTATTGTTGATGCGGCCACCGGTGTTGCGTTAACCGAAGAGCAAATAAAAGCCATCAATTTGCCCATTAAGACCGGTGTCACTCTGCTTTCGCCCACGTCAACTTCGTCTGCGTCGTCAGTGAGTGGTGTTTCGTTGCCCGCTTCGTCGCCTACAATTGCGCTCGCCGAGACGAGTATCGTGGACAACGGTGAGGGTTTGACTCGCGAACAATTGGATTTGATCAGTAAGATTATGCAACAGACGAAGCAAACGAGCGCACAGGTGACGGTCTCCTCACCCACTAGCGTTAATTCTTACAAAGTAGACACAAATCCATCTTCGTCTACACTTGGTGCGTCGGGATCACATAATGCCGTGAGCGGTTCATCGGGTCGACCGCGTACATGGAATATGCAACTATTAAACACGCAAAATGTATCCATCGCCGTCGATGAGTCTAATTCCGATGCGACGTCTAGCACAGCAACGTCGCCCATCGAAGCCAAAGAAGAGGAGGTGAATCAACAATTTGTGGCCGCCATTAATCCGCATCTCTTGAATATTGTCAAGATGGATCAGAAGCAAGTTGAATGCAATTTGTGTCATCGCAAGTTCAAGAATATACCAGCACTCAACGGACATATGCGGCTCCATGGCGGTTATTTCAAAAAAGACCCCGAGACCAAAAAGACAGAAAAGAAAGAGCCCAGCGGTCCACCGCTGCAGACAGCCAGTATTGGCGTGCGTGCGCTGATCGAAGAGAAAATCATCAGTAAACGCAAAGACATGAACAAGGGTGCCTTCGTAGTTCCTGCACCACCCAGTAGCGTATCCAGCACTTCCACAATCCGACGATCGATTAGCGATCTAGAAAGCTTCCTTAGTCCCAAATCACACAGCCACAATGGCAACATCGGCGGCGGTAACGGTGCCAACAGTAGTAACAACAATACGTCTAGTCAGAATTCGCCCACCGCCACCACAACAACTATGCTACCTGCCGCAACTACAATCAAAAACTTTAGTGGTGGTACATTGGGCTTGCAGCAAATCGGCATGTCGCAGGGTATCGAAATTTTTAGCACAAAGCAACAGAAGTCAGTTGGTAATGTGAGCCATAGTTTGGGTATGGGCTTGAGTGCGGCTCTCCAAGCGAATAATGCAACGATGAATCCGTCAACGATGAAATCTGCAGCAACGACAAATACAACGACTACCAAGGGAACTTCGACCGATCCGAAAGACTCGACACTCATTGAGTTATTGAAGCGCGGCACGCGCATCGCCGTCACTGCCAAGAAGCCACTAAACAGTACAAACCCAATAACAAATATGGGAAGCAGTAGCAGTAATAACGGCAATGGCGGATCGCGTCAAATAATCACCAACAACAATCGCACTGTGATTATACCGTCCGACGTGCAGGTTCTACCAACCCGTATGGCCAAGTCGAGTGCTAACGTCCTGCGATCCTCTACTCCCGCCAGTTTAGCTCTGACCGACACGACGCCACTATCACTCACCATATCGCAGAGTGGTGACGGCGGCATGGGTGGTGATGTGTACACGGTCACTTATAGCAGTGACACATCGGGATTTTTCGATGATGCGGAGGTCTATAATGTCGCTGACACGGATATGTTGCTGCAGACGGTAGATTCAATGCAGTTACTCAACGATGACTCGCAACAATTAAAAAGCGAACATTCCGAACAATTTGGCTCTGTGAGTGGCGTGGGGATCACGGAAGGCGATCACACCGACAATAGCGGTAATTGCATTCAAGCCGAATACTTGAAGTTAGAAGCCGACGGTAGTGTCAATGCTATGCCCACCACTTTACCCACTTTCCAACAATTTCATTCCAAAGAGTTAATCATGCAGAATAGTGCCCAGATACAGGCTGTGACTAGCATGCGTTCCAACGTGCATCAACTGGGCTCGTTATCCTCACCTATAAACTCGCCGCTCGCATATCCAACACCACCCTCCAGTCATGAAAATATGACGCAATCATCGCCCTACGTCGATGATGGACACCAGTATTCCGAAGTGACAAACGCTTTCTTCAACGAGAAATGCAGTGCCGATTTCCTCACGCAGTCAGCAACCGAAGTGACTTTCTTCAAAAGCAATGACAATCAGCATGAGCTTACCGAAACCGAGAAGATATTGAAGTTGAAGACCGTGTTGGAGGAGAGCGCTTTCGATGGTTCCATCAAGGTGGAGGATTTACTGAATGGTACACAGGAGGATGACACGGAATGTGATTTACGAGACTTTGCTGAAAGCAATCTGGCATTTTTAGATGAGGACCAGGAGTTTCTGAATGATTCCCGAAATGCAACTTCGCCTTTGCCCGAATCATTTTTCACCGGCAGCATTGGCACGGCCGAAGAAGTGAAAGAGGTATTGCGCGATGTGTTACCCGACGAAAATATCAATCTGAATTGCGAAGAGCAATCGGATGAAAATATTATTGACTTGTATTATTTGCCGGGTTTGGGCTTACAATCACAAATGATGCCTAACTCAGATGACCCGCTCTTATCTTCGTCTCCGAGAGATTTCGGTCAGCAAAGGGGACAAATTATACAAACGACGCAGCAAGTCCAAGCACAACAACAACAACAAAGTCAACAATCGCTATCACAATCACAGCAAGTACAGCACTCCACCTCCACACAGCATTTGCTTTACGCCCAGCAAATGGGGCAACAAATGCAACAACAACAGCAGCAACAAACATCTACCGGCGGTGACTACGTTGGCAATCAATTAGCAATGACAATGCAACAAACCGTCGCAGACGGCAATGACACATCCTCGACGCTACAGTACAATCTACAAAACCTACCGCAAGTACAAAACCAGCAACAATACATTGACGTGAACACACCGATTCAGCATGTGTCAACGCTTGATGGTGGCATACTGCACCAGCAGCTAGTCTTTACAGGTTCGACCGACAAGCAGGAGATACATATAACAGGACAACAAGGCGATATGGGTCTTCTGTCCGCCGGTAGCTCCATTAATACCGACACCAATATCTACTTCGCCAGCAACTCCAGTAATTCCAACAACTCAATGTCCGCTTTGCAACAAATCGGCAATCAGTCGAGTGCCTGCAATCTGCCCATCTCATCGTCGTCATGTCAACCACCAGCAGCTTCTACAGTTCTTTCCACACTGCAACCTCTCTCCAATCAAACAAATTCCATACTGAAGCGTCGTCTGCGGCCGCACAATTCCAGTGACTCCAGCAATTCACAAAGTTTCGCCAAATATCATCCGCTCTCACCGTATCGATCTAAGTTGCGCAAGCCCTCGCGTACCCATTATACACCGGCGCCTATACTTAATCCCGATCGAAAAGGTGTCGGACTGTATTGCAGTGTGCGCAAGCAACTCAACACGGGTCTGCTTGGTTTCGATAGTTTTGACGATGATTTCGATGATCCGGTGGGCTTAGTGGACTTTTCAGATGAATCAAAGGTCAATCTGGGCTCGGCGTATCAGGCACAAGTACCGCCTTGCCGAGAACGCATTCACAGTGCGGGTAGCGATGCCGCAACCGACGGTGAATTGTGTAAAACCAACTCTTGTTTCGACGTTGAGGAGCCTGTGAGTGCGGAGCAATTGTGGGACCCCACTGTACAAACAGACGAGAAGATTTTGATGCGCTACATTGACCTGAGCAAATCATCGGCTGTGCCGTTGGGCAGTCACACCGAAGAAGTAGCGCTGCACACACTGCTTAAAGCACAAGGAAATATGGCCGCGGCAGTACTAACATTACTCCAAACACCATCGAATGCATTCCAGATGAAGTGGTCCGCTACCGAATTGGAGGTGTTCTTAAAAGGACTGGAACGGCATGGCAAAGATTTTGGACGCATTTCACTGGAGTTGGGTTCAAAGACAACGGGAGAGTGTGTGCACATGTACTACTTCTGGAAGAAACTTTGTGTTGACTATAAAGTATCACATCTTAAAACGGAAACGCCACCTCCACCACCGGTGAACGATCCGAAGCCGTATGTCTGCGAAGTGCCGGATTGCTCTGCGAGCTTTACCTCAAAAGCTGCCCTGCATGGTCACACTCGCATACATACTTACGGTAGAAATGCTAATAGCCATCATAACAACAATAACAATAATAATCACAACAATAATGCTACAAGCAACACTACTAATCAGAACAACGGTGCCACAACGGGCGGCTCGACAAGCGTCGTCCAGCAGACCAACGGCTGTGCGTCACAGACACAATCTCAAGTGAGCGTCGGTGGTGCGAGTGCTTCCAGTGCATTACCGAAAGACGCTAGTCAAAGCGGCGTGCCCGGTGCCGTCAGCACCGCCAAGGACACCGACTTTCCCTGCAAGGTGTGCGGCAAAGTTTTTAATAAAGTGAAGAGTAGAAGCGCGCACATGAAGACGCATCGTGTGCAGGAGCAGCAGCAGCAGCAACAGCAACACCAGCAGCAACAGCAATCAGCCGCTGAAGCGTCCACCAACAGCAGCAATACAGTTGCGTCTGCGCAAAGCCAACAGCTAAGCGCGAATCAAAGTCACCACCAACACCAGCAACAACAACAATCGTCGATTGAGCAAAAATCCTGA
Protein Sequence
MCSASVGTEGSVTLQLRDSSDSNQSPAQTSLENALTIGYPDPEMLADVFGSLQTSSFKNHSSALVSTSPTTITNHNTNPINSNSNICNNNNSKPTKSPTSATSSAPSSSSTSTTTSAPANKVTISRRNQSSVPTAATTSAATSANTATTTAHTTTKSSVQTVSTATNTTNKTTSSYVKNCLIRSSSCSNTNNVTSLAQIMSNSSTSSSSSLLNHSNTNSNSNCSSNSNFSSSSSSNDSIVSVNSNNSGGGVLKSGGSSKVATAGGATGATLKKNRTKLSSPTRHGPQQCQICSKIFGNASALAKHKLTHSDERKYVCAMCSKAFKRQDHLNGHMMTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHSGIITPQNQTLSPTSSTPNGLSLSPATASGDASSPDGATCIRTYISTGGSIVDAATGVALTEEQIKAINLPIKTGVTLLSPTSTSSASSVSGVSLPASSPTIALAETSIVDNGEGLTREQLDLISKIMQQTKQTSAQVTVSSPTSVNSYKVDTNPSSSTLGASGSHNAVSGSSGRPRTWNMQLLNTQNVSIAVDESNSDATSSTATSPIEAKEEEVNQQFVAAINPHLLNIVKMDQKQVECNLCHRKFKNIPALNGHMRLHGGYFKKDPETKKTEKKEPSGPPLQTASIGVRALIEEKIISKRKDMNKGAFVVPAPPSSVSSTSTIRRSISDLESFLSPKSHSHNGNIGGGNGANSSNNNTSSQNSPTATTTTMLPAATTIKNFSGGTLGLQQIGMSQGIEIFSTKQQKSVGNVSHSLGMGLSAALQANNATMNPSTMKSAATTNTTTTKGTSTDPKDSTLIELLKRGTRIAVTAKKPLNSTNPITNMGSSSSNNGNGGSRQIITNNNRTVIIPSDVQVLPTRMAKSSANVLRSSTPASLALTDTTPLSLTISQSGDGGMGGDVYTVTYSSDTSGFFDDAEVYNVADTDMLLQTVDSMQLLNDDSQQLKSEHSEQFGSVSGVGITEGDHTDNSGNCIQAEYLKLEADGSVNAMPTTLPTFQQFHSKELIMQNSAQIQAVTSMRSNVHQLGSLSSPINSPLAYPTPPSSHENMTQSSPYVDDGHQYSEVTNAFFNEKCSADFLTQSATEVTFFKSNDNQHELTETEKILKLKTVLEESAFDGSIKVEDLLNGTQEDDTECDLRDFAESNLAFLDEDQEFLNDSRNATSPLPESFFTGSIGTAEEVKEVLRDVLPDENINLNCEEQSDENIIDLYYLPGLGLQSQMMPNSDDPLLSSSPRDFGQQRGQIIQTTQQVQAQQQQQSQQSLSQSQQVQHSTSTQHLLYAQQMGQQMQQQQQQQTSTGGDYVGNQLAMTMQQTVADGNDTSSTLQYNLQNLPQVQNQQQYIDVNTPIQHVSTLDGGILHQQLVFTGSTDKQEIHITGQQGDMGLLSAGSSINTDTNIYFASNSSNSNNSMSALQQIGNQSSACNLPISSSSCQPPAASTVLSTLQPLSNQTNSILKRRLRPHNSSDSSNSQSFAKYHPLSPYRSKLRKPSRTHYTPAPILNPDRKGVGLYCSVRKQLNTGLLGFDSFDDDFDDPVGLVDFSDESKVNLGSAYQAQVPPCRERIHSAGSDAATDGELCKTNSCFDVEEPVSAEQLWDPTVQTDEKILMRYIDLSKSSAVPLGSHTEEVALHTLLKAQGNMAAAVLTLLQTPSNAFQMKWSATELEVFLKGLERHGKDFGRISLELGSKTTGECVHMYYFWKKLCVDYKVSHLKTETPPPPPVNDPKPYVCEVPDCSASFTSKAALHGHTRIHTYGRNANSHHNNNNNNNHNNNATSNTTNQNNGATTGGSTSVVQQTNGCASQTQSQVSVGGASASSALPKDASQSGVPGAVSTAKDTDFPCKVCGKVFNKVKSRSAHMKTHRVQEQQQQQQQHQQQQQSAAEASTNSSNTVASAQSQQLSANQSHHQHQQQQQSSIEQKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00192757;
90% Identity
iTF_00192757;
80% Identity
iTF_00190224;