Bcor017149.1
Basic Information
- Insect
- Bactrocera correcta
- Gene Symbol
- -
- Assembly
- GCA_027475135.1
- Location
- CM050322.1:68182449-68184189[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.5e-10 7.4e-07 29.5 0.1 3 38 13 48 11 51 0.93
Sequence Information
- Coding Sequence
- ATGCCGAAGAAAGGGGAAATTCGTAAGTGGAATTCAGAAAACATGAAAAAAGCCATACAGGCTGTAAGAGCCGAAAAGATGGGAATACTTCTGGCATCGAAAACGTATGGTGTCCCATTTGCAACCTTGCAAAGAGCTGCCCGCAGCGATAAAACAATCGACGAAATATTAGCTATTCCATTGGGACGTAGGCCGGTTTTTAACCAAGATGTTGAATTAGAGCTGGTAAGAGCTGGCAAAGTTTTGGGGGCTCACTCGAAGGAATGCGCCGGAAAAGATTGGTTGCGTAGCTTTCTAAATAGACATAAAACGGAAATAAGTTTACGCTCTGCCACAGGTACCTCAATCGAGAGAATCAAAGGATTCAATGTGGAAAATGTGAGCAAGTTCTATAATTTATTGGAGCAGGAGTTTGAGAAGCATAAATTTTCTGCAACTAGAATATGGAATGTTGATGAGACAGGAGTGTCTATCGTGCAAAGTAAGCAGCCAAAAATTTTAGCAGCAAAAGGCAAAAGGCAAATTGGTTGCATGACTTCAGCAGAAAGAGGATCTCTCATAACAGTTATAAGCTGCATGAGCGCAGGAGGAGCCTTTGTTCCACCATTTTTCATTTTTCCAAGAAAAAATCCCTCTCCGCTTTTAATGAAACATGCTCCCCCTGGTTCCGATTCTGCTTGTCACATATCGGGATGGATACAAATACCAATATTTACCGCGTGGTTTGATCACTTTTTGCAATTCACTAATCCATCAAAAGAGAACCCAATCTTGCTTATTTTAGATGGCCACTACAGTCATACGCGAAATGTTGATGTTTTGGATAAGGCTCGTCAAAATGGCGTCATTATCTTATCATTGCCACCTCATTGTACACACAAAATGCAACCCTTAGATAAAGCATTTATGGGTCCTCTTAAAACATATTACAATGACGAAATAAGACGATTTATGCTAGAGCAAGGCCGAAAGGTGACACAATTTGATGTAGTTGAGCTGTTTTCAAAGGCTTATCTGAAAGTTCAAACGGCACAGATAGCAATTAATGGGTTCAAATGCACTGGTATTTATCCCTTTGATAAAAATATTTTCCAGGAAAGTGATTTTATGGAGCAACGCCAAGAAAATCCGCTGAAAGATACTCAACCTATAGAAGATATATTTTTAGAAGAACCAGTGGCCAGCACAAGTAGGGCAGCGATGAAAAATTTCGTCACACCTTGGCAGATATCCCCACCACCTAAGCTAAAACTGTCAACCAGCTCCAGAGGCAAACGATCAGAATCGACAGTGTTAACAACATCACCATATAAAGCGCTTTTGGAGGAAAGCATCAGAAATGTTGAAAAGCGCAAGAAAAAAGGAAATGTAAAAGACATACCGCATTCACGTAAAACCAAAACACAACGGGCAACCAAAACTAGGGAAACTTCTTCGAGCGAGTCGGAAAAAAACTTGCATCTTCCCAGTTCAGATGAGGAATGTTGGGCGGAAACACCACCTAGTAAGGATACTGCGTACGCTTTTTGCAACAAAAACTTTGAGACGGATAAAGGAAGTAGTGCTTGGGTCAAGCAATATTTGTTTGCGAGTCCTGCCAAACATTTTAAAATTAAAAACAGTACACATTTTTTTGAATCCTTGATTGTTTCTATGTACATACTTGAATAG
- Protein Sequence
- MPKKGEIRKWNSENMKKAIQAVRAEKMGILLASKTYGVPFATLQRAARSDKTIDEILAIPLGRRPVFNQDVELELVRAGKVLGAHSKECAGKDWLRSFLNRHKTEISLRSATGTSIERIKGFNVENVSKFYNLLEQEFEKHKFSATRIWNVDETGVSIVQSKQPKILAAKGKRQIGCMTSAERGSLITVISCMSAGGAFVPPFFIFPRKNPSPLLMKHAPPGSDSACHISGWIQIPIFTAWFDHFLQFTNPSKENPILLILDGHYSHTRNVDVLDKARQNGVIILSLPPHCTHKMQPLDKAFMGPLKTYYNDEIRRFMLEQGRKVTQFDVVELFSKAYLKVQTAQIAINGFKCTGIYPFDKNIFQESDFMEQRQENPLKDTQPIEDIFLEEPVASTSRAAMKNFVTPWQISPPPKLKLSTSSRGKRSESTVLTTSPYKALLEESIRNVEKRKKKGNVKDIPHSRKTKTQRATKTRETSSSESEKNLHLPSSDEECWAETPPSKDTAYAFCNKNFETDKGSSAWVKQYLFASPAKHFKIKNSTHFFESLIVSMYILE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00189874; iTF_01563692; iTF_01563691; iTF_00189876;
- 90% Identity
- iTF_01563692;
- 80% Identity
- -