Bros096210.1
Basic Information
- Insect
- Bacillus rossius
- Gene Symbol
- stc
- Assembly
- GCA_032445375.1
- Location
- JASMSR010000005.1:37094466-37133381[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 1.8 9.6e+04 -4.0 1.6 15 19 149 153 148 153 0.81 2 16 0.44 2.3e+04 -2.0 0.4 4 10 182 188 182 188 0.93 3 16 1e-07 0.0053 19.2 13.4 2 18 200 215 199 216 0.91 4 16 1.3e-08 0.00068 22.1 13.2 1 18 251 268 251 269 0.97 5 16 2 1.1e+05 -4.1 1.6 8 13 274 279 273 280 0.73 6 16 2.1e-10 1.1e-05 27.8 15.5 1 18 309 326 309 327 0.98 7 16 4e-07 0.021 17.3 15.3 4 19 376 391 369 391 0.87 8 16 1.2 6.4e+04 -3.4 2.0 5 10 420 425 420 425 0.93 9 16 0.00047 25 7.5 8.1 1 11 452 462 452 463 0.97 10 16 1.6 8.4e+04 -3.8 0.9 4 10 467 473 467 473 0.86 11 16 5.6e-09 0.0003 23.2 17.1 1 19 479 497 479 497 0.98 12 16 1.3 6.7e+04 -3.5 1.1 6 10 526 530 525 531 0.55 13 16 2 1.1e+05 -4.3 13.4 1 19 536 554 536 554 0.75 14 16 0.3 1.6e+04 -1.5 2.8 9 18 572 584 571 585 0.72 15 16 3.2e-06 0.17 14.4 12.5 1 16 590 605 590 616 0.87 16 16 4e-06 0.21 14.1 17.6 1 19 622 641 622 641 0.96
Sequence Information
- Coding Sequence
- ATGCCGCAAATCTCAGCCCGAGTCGCTCCCACGCTAAGCGTACTTAGAGCGGGAAACATGGCCCTGGGTAACCCCGGGCTGCAGGGGCCACATCAGTCACCTCTTGACCCGCGGCAGCCAGAGGCATCTCGTTCAGTGTGCCTCTCATCGCTCCTTCATCATGTGCCAGTTCTTACGCACCTGGCAACAGTTCTCGGGAGAGCTACTCTTCGGCACAAAATTCGGATGAAAGATGCTGGTCTCCACATCAGAACAAACGACGTGGCGAGCCAGGCTGACCGCCTCAAGGACCAGCTGATGAAGGGGGTGCTGGAGTGCCTGGTGTGCTGCGACCGTGTGCGCCAACACGACTCGGTGTGGAGCTGCTCCAACTGCTTCCACGTGCTGCACCTCAGGTGCACCACCAAGTGGGCCAGATCCTCCAAGATAGACTGCGGCTGGCGGTGCCCGGCGTGCCAGAACGTGACGGAGAGGGTGCCCAGCGAGTACTACTGCTTCTGCGGCAAGGTGCAGGAGCCCAAGTGGAACCGCCAGGACACCCCCCACTCATGCGGGGAGATGTGCGGCAAGTCGCGGGCCGACAAGCGCCCCGACTGCGCCCACCGCTGCACGCTGCTGTGTCACCCGGGGCCCTGCCCCCCGTGCCTCGCCCAGGTCAACAGaaaCTGTGGATGCGGCAAAATCTCTAGAGTGGTGAAGTGTGGCGACAAACCGCTTCTTTGCGATGCAGTCTGTGAGAAGGTGCTGAACTGTGGCGTTCACAAGTGCGAGAAGACATGTCATGTCGGAGAGTGTGGGAATTGTGACCAGACAATCAAGCAAGAGTGCCACTGCGGGAAGGAGCAGCAGGAGGTGACGTGCTGCCCGGCCTCGGTGGGGGTCCAGCGGTACAGCTGCGGCCAGGCCTGCGGCGGGCAGCTGGAGTGCGGGAACCACCGGTGCGAGGCGCCGTGCCACCCGGGGCCGTGCCGGCCCTGCATGCTGGCCCCGGGCGCGGTGACGCACTGCCCCTGCGGCAAGACCCCGCTGGGCGGGGGCCGGGCCCGGGCCAGCTGCCTGGACCCCGTGCCCGTCTGCCAGCTGGCCTGCGGCAAGAAGCTCGCCTGCGGGCAGCCCAACAGCCCCCACAGGTGCGAGGAGCAGTGCCACAGCGGGGCGTGTCCTCCGTGCCCGGGCACCACGCTGGTGCGGTGTCGCTGCGGCAACATGGACCGGGAGATACCCTGCGTGGAGCTGGTGAGCCGTGCCGACGACGCGCGCTGCGAGAAGAAGTGCACCAAGGTACGTCCCTGCGAGCTGCGGTGCACCGACCACGTTGGCTGCCAGCAGGGAATATGTGCCAAAAAGCGGGCGTGCGGCAAGCACCGGTGCAACCAGCTGTGCTGCATCGACCTGGACCACGTCTGCCCCCTGGTGTGCAACCACCTGCTGAGCTGCGGCCAGCACCGCTGCGAGGAGCCGTGCCACCGAGGCCACTGCAAGCCGTGCTGGCGCTCCAGCTTCGAGGAGCTGTACTGCGAGTGCGGGGCCAGCGTGCTGTACCCGCCGGTGCCCTGCGGCACCAGGCCGCCCGCCTGCGACCGCCCCTGTCCCCGGGACCACCCCTGCGGACACCCGCCCCTCCACACCTGCCACAGCCAGCAGGCCTGCCCCCCGTGCACCGTGCTGACCCACAAGCACTGCTACGGCAAGCACGAGCTTCGCAAGACCATCCCGTGCCACCAAGGAGAGTTCTCGTGCGGCCTGCCGTGCAACGCAGCCCTGCCGTGCGGCCGCCACCGCTGCGTGCTGCCGTGCCACGCGGGGCCTTGCCTGCGCGAGGGCCAGAAGTGCACCCAGCCGTGCACCGCGCCCCGCACCCTGTGTGGGCACCCCTGCTCCGCCCCCTGCCACGAGGGGCCCTGCCCCTCCACCCCCTGCAAGGAGATGGTGAAGGTGACCTGCGAGTGCGGACATCGCTCTACTGGCCGGGCGTGTTCCGACAATGTGAAGGAGTACCAGCGAATAGCGACGGCCATGCTGGcttccaagatggctgacatgcaGCTGGGGCTGTCGGTGGATATTGGGGACATCCTGGGCAATCCCAACACCCAGAAGATGGCGCTCAAGACGCTGGAGTGCAGCGACGAGTGCAAGCTGATAGAGCGCAACAGGCGCATGGCCATCGGGCTGCAGATCCAGAACCCGGACCTGAGCGCCAAGCTGACGCCGCGCTACTCGGACTTCCTGCGCCAGTGGGGGAAGAAGGACCCGCAGTTCTGCAGCACGGTCCACGACAAGCTGacggagctggtgcagctggccaagCAGTCTAAGCAGAAAAGTCGGAGCTACTCGTTCCAGCCAATGAATAGAGACAAGCGCCACTTTATCCACGAGTACTGCGAACACTTTGGTTGCGAGTCTGTTGCGTATGACCAGGAACCAAAAAGGAACATCGTTGCCACTGCAGTGAAAGATAAGTCGTGGCTGCCGAGCATGAGTTTGCTGGAGTTCCTGCAAAGGGAGAGTGGCCAGCGAAAGATCCCGAAGCCAGTGATTGGTGCCAACAGGACACCATCTCACAGGTCCCGTCATGACGCGCTGACGCAATCCTTACGCAGCCGAGTCAAGCGCGGAACTGATCCCCTCCACTTCCCCTGGCGGCTATCACGTGACGGTAGTGTGCGTCACGCCACGAATTGGGGTCTGCGCAGGCCAGTGGACCTGCTAGCGGACAGCTGGCCCATTGGCAGCCAGATGGAGACGGATCCCGAACCACTGACGCAGCGCATTCCTTTTTGGATTAGTGGGATCCTCGCGCTACAACCCCCCCCGAACCTTTTCAACTTTCTTCAGTGCTTTGTCATTGATCCCTCAGTCCCGCTGGAGAATTCTGTCGGCTCCCAGAGGCCGCTGCGAGGAGTGGCGTAA
- Protein Sequence
- MPQISARVAPTLSVLRAGNMALGNPGLQGPHQSPLDPRQPEASRSVCLSSLLHHVPVLTHLATVLGRATLRHKIRMKDAGLHIRTNDVASQADRLKDQLMKGVLECLVCCDRVRQHDSVWSCSNCFHVLHLRCTTKWARSSKIDCGWRCPACQNVTERVPSEYYCFCGKVQEPKWNRQDTPHSCGEMCGKSRADKRPDCAHRCTLLCHPGPCPPCLAQVNRNCGCGKISRVVKCGDKPLLCDAVCEKVLNCGVHKCEKTCHVGECGNCDQTIKQECHCGKEQQEVTCCPASVGVQRYSCGQACGGQLECGNHRCEAPCHPGPCRPCMLAPGAVTHCPCGKTPLGGGRARASCLDPVPVCQLACGKKLACGQPNSPHRCEEQCHSGACPPCPGTTLVRCRCGNMDREIPCVELVSRADDARCEKKCTKVRPCELRCTDHVGCQQGICAKKRACGKHRCNQLCCIDLDHVCPLVCNHLLSCGQHRCEEPCHRGHCKPCWRSSFEELYCECGASVLYPPVPCGTRPPACDRPCPRDHPCGHPPLHTCHSQQACPPCTVLTHKHCYGKHELRKTIPCHQGEFSCGLPCNAALPCGRHRCVLPCHAGPCLREGQKCTQPCTAPRTLCGHPCSAPCHEGPCPSTPCKEMVKVTCECGHRSTGRACSDNVKEYQRIATAMLASKMADMQLGLSVDIGDILGNPNTQKMALKTLECSDECKLIERNRRMAIGLQIQNPDLSAKLTPRYSDFLRQWGKKDPQFCSTVHDKLTELVQLAKQSKQKSRSYSFQPMNRDKRHFIHEYCEHFGCESVAYDQEPKRNIVATAVKDKSWLPSMSLLEFLQRESGQRKIPKPVIGANRTPSHRSRHDALTQSLRSRVKRGTDPLHFPWRLSRDGSVRHATNWGLRRPVDLLADSWPIGSQMETDPEPLTQRIPFWISGILALQPPPNLFNFLQCFVIDPSVPLENSVGSQRPLRGVA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -