Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 3.2 4.3e+04 -3.3 0.1 26 31 9 14 8 17 0.69

2 3 7.6e-19 1e-14 56.3 9.1 1 35 26 59 26 60 0.97

3 3 0.0034 46 6.2 0.3 26 34 64 72 63 73 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	3.2	4.3e+04	-3.3	0.1	26	31	9	14	8	17	0.69
2	3	7.6e-19	1e-14	56.3	9.1	1	35	26	59	26	60	0.97
3	3	0.0034	46	6.2	0.3	26	34	64	72	63	73	0.92

Coding Sequence: ATGTTCGCTAATACGTGGTGCCCGTGTGGCGAGGGTTGGAGATACAAGTCGGCGGCGCGGCGGGCGGGCACCAGCTGCGCCAACTGCaagaccaccaccaccacgctgTGGAGGAGGAACCAGAACGGCGAGCCCGTGTGCAACGCCTGCGGCCTCTACTACAAGCTGCACAACACCACACTGCCACTTTGCGGCCTCTACTACAAGCTGCACAACATGAGTAGAGCCTCCCTcgtacccggcgcctccaccaatcCGCTATGCGCAGACCACACTGACACTTTgcggggtcccagcgtgatgtgggagatcggggacggcgccagcaCGCAGCTACCGACAACCATCCATCCCAGAGGGGTGTGCAGGCGGCGAGCTGTCAGCGGGGCGGGCTTCTGCCTGCTGGTCGAGTTCCGGTGTCGtcaatTGGCCGGTGTGTCATTACATCCCCCCGCCCTCTCTCAGCGTTCACAAACTGTTGCCGAAACGACCCCGGGGGAAATCGCGGAGCCATTGAGCGCCTTAAGTGCGTCGCGGAGACGTCGCCGCCTTTTGTGCCGCCTGAATGGCcgGGCTGAATTGATCGCCGCAGGGGGGCAGGTAGGTACCGCTCCCAGGGTGCACGACCCAACAGCTGTGCCGGAACACACCCGCCTccccccctaa
Protein Sequence: MFANTWCPCGEGWRYKSAARRAGTSCANCKTTTTTLWRRNQNGEPVCNACGLYYKLHNTTLPLCGLYYKLHNMSRASLVPGASTNPLCADHTDTLRGPSVMWEIGDGASTQLPTTIHPRGVCRRRAVSGAGFCLLVEFRCRQLAGVSLHPPALSQRSQTVAETTPGEIAEPLSALSASRRRRRLLCRLNGRAELIAAGGQVGTAPRVHDPTAVPEHTRLPP

Sequence clustering based on sequence similarity using MMseqs2