Basic Information

Transcription Factor Domain

TF Family: zf-C2HC
Domain: zf-C2HC domain
PFAM: PF01530
TF Group: Zinc-Coordinating Group
Description: This is a DNA binding zinc finger domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.2e-16 2.2e-12 49.3 9.7 1 28 38 65 38 66 0.97

2 4 2.9e-17 5.2e-13 51.3 5.7 1 29 82 110 82 110 0.98

3 4 2.7 4.8e+04 -3.0 0.2 12 15 148 151 143 154 0.60

4 4 3.6 6.5e+04 -3.4 1.2 19 23 201 205 200 210 0.55

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.2e-16	2.2e-12	49.3	9.7	1	28	38	65	38	66	0.97
2	4	2.9e-17	5.2e-13	51.3	5.7	1	29	82	110	82	110	0.98
3	4	2.7	4.8e+04	-3.0	0.2	12	15	148	151	143	154	0.60
4	4	3.6	6.5e+04	-3.4	1.2	19	23	201	205	200	210	0.55

Coding Sequence: ATGGTTGTGGATGCAGAATTTGGGTTCCTACAGCCGTGTTTCTCTGAGTGCAGCGTGCTTGTAAAATTTCGATTCGTGCACGCCAAAAAAGTCTCGATCGCAAAAGGCAGCAAGTGTCCGACTCCGGGCTGCACCGGTCAAGGTCACGTGACGGGACTGTACTCGCACCACAGGAGTTTGTCTGGCTGTCCTAGGAAAGACAAAGTTACTCCTGAAATCCTGGCCATGCATGAGACAATCCTGAAATGCCCGACCCCGGGCTGCAACGGCCGTGGCCACGTAAGCACCAACCGTAACACGCACCGGAGTCTCTCCGGCTGCCCCATCGCGGCCGCCAACAAGCAGGCGTCGAGGCGGGTCACCTCGGCGTCCTCCTCGTCCCACCaacaccaccaacaccaccaacaccaccagcGCCACGCACCATTCCAGCACCACCAGCACATGTCAGGTGAGCGAGATCGCTGGGAGATCTGCCGCTGGGAGATCACAGTCCCTCTAGCTGCCCTGAAACCTGCCAGCGAGCATAGAGGCTATTCATCTTGGTACTGTTCTATCATcaccaccaacaccaccaacaccaccaacaccaccaTCGTCACGCACCATTCCAGCACCACCAGCACATGTCAGGTGAGCGAGATCGCTGGGAGATCTGCCGCTGGGAGATCACAGTCCCTCTAG
Protein Sequence: MVVDAEFGFLQPCFSECSVLVKFRFVHAKKVSIAKGSKCPTPGCTGQGHVTGLYSHHRSLSGCPRKDKVTPEILAMHETILKCPTPGCNGRGHVSTNRNTHRSLSGCPIAAANKQASRRVTSASSSSHQHHQHHQHHQRHAPFQHHQHMSGERDRWEICRWEITVPLAALKPASEHRGYSSWYCSIITTNTTNTTNTTIVTHHSSTTSTCQVSEIAGRSAAGRSQSL

Sequence clustering based on sequence similarity using MMseqs2