Basic Information

Insect: Bacillus rossius
Gene Symbol: Prdm15
Assembly: GCA_032445375.1
Location: CM063643.1:66371885-66419105[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.5 4e+02 4.2 0.4 2 21 221 240 221 243 0.89

2 13 0.69 1.9e+02 5.3 6.2 1 23 619 641 619 641 0.97

3 13 0.2 54 7.0 1.0 1 20 675 694 675 696 0.93

4 13 9.5e-05 0.026 17.4 0.6 1 20 705 724 705 727 0.95

5 13 0.12 33 7.6 0.1 2 23 766 787 765 787 0.95

6 13 0.42 1.1e+02 6.0 3.8 2 21 833 852 832 854 0.92

7 13 1.3 3.4e+02 4.4 3.0 1 16 859 874 859 876 0.90

8 13 8.8e-05 0.024 17.5 0.1 2 23 910 931 909 931 0.94

9 13 0.0016 0.43 13.6 4.2 1 23 936 958 936 958 0.97

10 13 8.8 2.4e+03 1.8 0.1 10 23 964 977 962 977 0.87

11 13 0.00044 0.12 15.3 0.8 2 23 986 1007 985 1007 0.94

12 13 1.3e-05 0.0036 20.1 5.3 1 23 1013 1035 1013 1036 0.96

13 13 0.001 0.28 14.1 1.3 1 23 1041 1065 1041 1065 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.5	4e+02	4.2	0.4	2	21	221	240	221	243	0.89
2	13	0.69	1.9e+02	5.3	6.2	1	23	619	641	619	641	0.97
3	13	0.2	54	7.0	1.0	1	20	675	694	675	696	0.93
4	13	9.5e-05	0.026	17.4	0.6	1	20	705	724	705	727	0.95
5	13	0.12	33	7.6	0.1	2	23	766	787	765	787	0.95
6	13	0.42	1.1e+02	6.0	3.8	2	21	833	852	832	854	0.92
7	13	1.3	3.4e+02	4.4	3.0	1	16	859	874	859	876	0.90
8	13	8.8e-05	0.024	17.5	0.1	2	23	910	931	909	931	0.94
9	13	0.0016	0.43	13.6	4.2	1	23	936	958	936	958	0.97
10	13	8.8	2.4e+03	1.8	0.1	10	23	964	977	962	977	0.87
11	13	0.00044	0.12	15.3	0.8	2	23	986	1007	985	1007	0.94
12	13	1.3e-05	0.0036	20.1	5.3	1	23	1013	1035	1013	1036	0.96
13	13	0.001	0.28	14.1	1.3	1	23	1041	1065	1041	1065	0.89

Sequence Information

Coding Sequence: ATGAGGAGAAGCAACCCGACCACTGCCGAGCAACCAACTTGCGTCACTGACCTCACACTGCCCAGCCCGTCAACAACTACACCCCAAGGACTTTGTCGGCGAGAAGGGGTGGAAGACAGCAGGAGCCTCACGTACGCCCGCCTCTCTCTGCCGGCCAGCCTGGAGGTGCTGGATTCTGCGGACGGGACGCCCGCCGTAGTCGCTCGCACCACGTTCGCCAGGGGCACTCAGTTTGGTCCCTTCAAGGCTCGACACCTCTCGGAGCTGTCTTTCACAACAGAATTTCCTATCAAGGTTTTCAGAAGCTTGGGCAAAGATAATGACGACGGTTGGTTTCTGGACACCAGTGACGAGAACTCTTCCAACTGGATGTGCTTGGTTTCACCAGCAACTTCTCCCAAGAATCAGAACCTCATGTGTTATCAGGACAGTTCCCACATCTACTATGTAGCACTGAAGGACATTCAGCCCGGGGAGAAACTGTACAAGGAGGTGGCGAGCAGGCTGGCGGAGGGGCTGCCCGCCAGCCGGCTGGGGGCGCGGAAGGCCCCGGAGAGGTGGCGCTGCCGGCTGTGCGGCGTCGGCGAGGCCGGCGTGGTGAAGCACGCCAGGCACCTCATGTCCCACTACAAGCCCCTGCTGGCGCGCGCCGAGAAGCCTCGCTGCCACGCCTGCGGGCTGGCCCTGCCCACGGAGAAGCTTCTGGTGCGTCACAAAGTGGAGAAGCACGGGTTGAAATTGAAGAGATGGTGTCAAGCTGGCGTGAAGAAACAACAGGAGCGTAGGAATGACGACAGAAGCGTGTCCAAAGATGAAGCGCCCCCATCTTTCTCGGGGAAAACTCCAGTTTCTCCCAGGGAGGTGCGAGCACCGATGCCGTCGATGGAGGCGCAGTATTCGCCCCAACAAATGGCGTCCTCGTCTTTGGACGTGCCTGCCACGTCTCAGGAGATGCAGGTCTCGTCCGTGGGCGGAGGTTTCCGCGACGGGTTGGCAGCATCGTCGCGCGAGCTGACAGTCGCGGCCTTGGACGACGAGGAGCAGCGGCAGCCTTCGACGAACGCACTCCACCTTGTGCCTGAAGAGATGCAGGTCTCATCCTCCGAACTGCAGTCTTCGTCGCAGGAAACGCAGAGCGATGCCATCAAGTCGTTCTTCGCACAATACCAGGAAGACATAAGCGGGGACCTCGCAGTGGGCTGTGCTGTTAAAGCCGGCCACGAGACCCTCCAGGCGGGTCTGGCCAAAGACTCCCTGTCGAACTTCGGGCTGTCCTCCGGCGAGATGTTCCTCCAGCAGGACGCGTCGTCGGAATCCGGCTCCAGGAAGAACTTTGAATCGGCGGACACCCTCAACCACATTTCAGACCCGACTTCGTCGTCCTTGGCCAACATGTTGGCGCGGGAGGAGGAGGACGGGGTTTCCCACGTGCACATCATGATAATGACCCAAGCGCACGAGGATGGCTACAGCCTGAACCTCACAGCGGGCCAGGGGGAGCCGTTCCATGCGGAGCAAGACCAGGCGGAGGTGCAAGCGCGGAACGGCTCCGTGGGAGACGTCAGCTGCGCTCAGCAAACTGAATCGGCCGAAATGTCAGCGAATGGTGTTTTGGCAGCCATGCCGCAGTACGTACTTACTCTGCAAGATGAAGAGGCCGCCAAGAAGAAGGATGAATCTGGGCAGTCTGATAAAGTCAAGATTATTGGCAACACTGCACAGGTCCACCTGGTGTTTGTAGACACGCTCGGACACAGCGTGTTGAATGGTGGTGGTTCTCGCGATGCCGGTTGTCATGGTTTGCAGCGGGACGGTCCAGCGTCGTTGCCCGGGCTGCTGGAGCAAGGACCGCCGTACACTTGCGACATCTGCCAGAAGGAGTTCCACTGCTCCGAGTACATCTACCGACACCTGCGTAAGCACACCGGCGAGTTCATCTGCATCTCCTGCAAAGTGGTGAGGCTGCTTCGCTTCTTCGTCCCTCGCATTTCTCTTGGGTGCTGTTACCGCCATCGCCACGCGCACACGTGCAAGGACTGCCGGCGCGTGTACGGCTCGGAGAAGGCGCTCGGGGCCCACCGCTGCGACAAGGGGGCCCGGGAGCCGGGGCCCTACCGCTGCCCGGTATGCAGCAAGGAGTTCCAGCGCCGCAGCAACCTCGACAAGCACCTGCCGCTGCACGCCGGGGCCCGCCCCTGCGTCGTCTGCGGCAAGAAGCTGCGGGCCGGGGGCGTCGCCGGCGCCCACGAAGCTCTCTGCACCCAGGGCAAGGTGCTGGAGGCCACAGGCAGCACGCCGTGCCCGCGCTGCCCGGCAGTCCTCACGCAGCTGGCGCAGTACAGGCAGCACGTGTACCGCCACTCCCACCCGCTCAGCTGCGACGCCTGCGGCCGTCGCTTCGCCGAGCCGCGTGTCAAGAGTGAGTGCCAGCGCTTGGCTGCTAGGCCCGGGTTGCATGTGGCCGCGTACTCGCACGTGTGTCCGGGGGAAGTTCTGTGCTGTGACGTCTGTCGGGAGCAGTTCTCGACGCTCGCAGACTTCCAGTCGCACCAGCTGTGCCACGGCGTGCCGCGGTTCCACTGCTACGAGTGCGGCTGCAGCTTCCACAACTCCGAGAGCCTGTCGAGTTGCTGCCACAAGGCGAACGCCGTGAGGCAGCCCAAGAAGTCCCGCGGCGGAGCCGAGGCGTCGGGTGGGGCCGGCGCCCGGGACGCGGAGAGGGCCCTCATGTGCCAGGTGTGCGGGGAGACCTACAAGACTGCGGCGAGCCTCAAGTCGCACATGGTGCTGCACGGTGAACGCAAGTTTGAGTGCGAGGTGTGCCATAAACGTTTCTTCCGGAAGGATGTGCTTCAGGAACACCACTCCGTGCACCAGGAAGCCCAGGAGTTCTTCCAGAAGGCCAACCTGATCAAGCACTCGGCCGTCCACGAGCCGGCGGCGAGCCGGCGGCTGACGTGCCGGACTTGCGGCAAGACGTTCTCATCGCGGGAGTACTTCGCACAGCACGAGCTCGAGCACACCCAGGGCCGCATATTCCAGTGCGACGTGTGTGGCAAGAGCTTCATCAAGAAGCACCTGCTGAAGTCGCACGTCAAGAAGCACCACGGCCAGCAGAGCTACCTGTGCCCGTACTGCAACGTGACGTTCGTCCACTGGAACTCCATCCGCAGGCACCTGCAGTCCCAGCGGCACAGCAGGCAGCAGGGCCGGTGCCCTTCCCCCGGCTTCGCGGACCACCAGCTGCTTCAGAGCGAAGGTGCTGCCTGTCTCCCTGGCGTGAGAAAAAGGGTCGCAAGTGCGGAGATACTGTCGGTGCCAGCCGTGCCTTTGCAAATGGCGGGAGTGACCGGCTCCGCCCGGGCGGAGGGGAGCGAGCCTTCCCTCGACCAGTCCACAGTGCTGCTGTCTGCCGAGGACTCGGCCATGCCCATGAGTGCGTACATCCTGGAAGAGGGCTCCGTGATCCAGCCAGAGGCTGGGGAAGGGGGCATCTTGTTGTATGTGCTGGACGCCGTGCCCTCGACGGATGCCTACGAGGAACTGGCCTGA
Protein Sequence: MRRSNPTTAEQPTCVTDLTLPSPSTTTPQGLCRREGVEDSRSLTYARLSLPASLEVLDSADGTPAVVARTTFARGTQFGPFKARHLSELSFTTEFPIKVFRSLGKDNDDGWFLDTSDENSSNWMCLVSPATSPKNQNLMCYQDSSHIYYVALKDIQPGEKLYKEVASRLAEGLPASRLGARKAPERWRCRLCGVGEAGVVKHARHLMSHYKPLLARAEKPRCHACGLALPTEKLLVRHKVEKHGLKLKRWCQAGVKKQQERRNDDRSVSKDEAPPSFSGKTPVSPREVRAPMPSMEAQYSPQQMASSSLDVPATSQEMQVSSVGGGFRDGLAASSRELTVAALDDEEQRQPSTNALHLVPEEMQVSSSELQSSSQETQSDAIKSFFAQYQEDISGDLAVGCAVKAGHETLQAGLAKDSLSNFGLSSGEMFLQQDASSESGSRKNFESADTLNHISDPTSSSLANMLAREEEDGVSHVHIMIMTQAHEDGYSLNLTAGQGEPFHAEQDQAEVQARNGSVGDVSCAQQTESAEMSANGVLAAMPQYVLTLQDEEAAKKKDESGQSDKVKIIGNTAQVHLVFVDTLGHSVLNGGGSRDAGCHGLQRDGPASLPGLLEQGPPYTCDICQKEFHCSEYIYRHLRKHTGEFICISCKVVRLLRFFVPRISLGCCYRHRHAHTCKDCRRVYGSEKALGAHRCDKGAREPGPYRCPVCSKEFQRRSNLDKHLPLHAGARPCVVCGKKLRAGGVAGAHEALCTQGKVLEATGSTPCPRCPAVLTQLAQYRQHVYRHSHPLSCDACGRRFAEPRVKSECQRLAARPGLHVAAYSHVCPGEVLCCDVCREQFSTLADFQSHQLCHGVPRFHCYECGCSFHNSESLSSCCHKANAVRQPKKSRGGAEASGGAGARDAERALMCQVCGETYKTAASLKSHMVLHGERKFECEVCHKRFFRKDVLQEHHSVHQEAQEFFQKANLIKHSAVHEPAASRRLTCRTCGKTFSSREYFAQHELEHTQGRIFQCDVCGKSFIKKHLLKSHVKKHHGQQSYLCPYCNVTFVHWNSIRRHLQSQRHSRQQGRCPSPGFADHQLLQSEGAACLPGVRKRVASAEILSVPAVPLQMAGVTGSARAEGSEPSLDQSTVLLSAEDSAMPMSAYILEEGSVIQPEAGEGGILLYVLDAVPSTDAYEELA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -