Bros066706.1
Basic Information
- Insect
- Bacillus rossius
- Gene Symbol
- -
- Assembly
- GCA_032445375.1
- Location
- CM063647.1:55866229-55884126[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 25 6.6e-06 0.0018 21.1 1.6 1 23 237 259 237 259 0.96 2 25 0.24 66 6.7 2.1 1 23 272 295 272 295 0.97 3 25 0.58 1.6e+02 5.5 3.4 2 23 302 323 301 323 0.97 4 25 0.035 9.6 9.3 0.0 1 23 424 446 424 446 0.95 5 25 0.004 1.1 12.3 3.5 1 23 463 486 463 486 0.97 6 25 0.0052 1.4 11.9 0.2 1 23 537 560 537 560 0.96 7 25 0.0047 1.3 12.1 0.2 1 23 566 588 566 588 0.97 8 25 2.3 6.2e+02 3.6 0.4 1 22 597 618 597 619 0.85 9 25 6.7 1.8e+03 2.2 3.6 1 23 677 700 677 700 0.95 10 25 0.1 28 7.9 0.1 2 23 780 802 780 802 0.95 11 25 0.34 93 6.2 0.5 2 23 809 831 808 831 0.96 12 25 6.1e-05 0.016 18.0 2.7 1 23 838 860 838 860 0.98 13 25 0.002 0.55 13.2 2.6 1 23 923 946 923 946 0.98 14 25 0.93 2.5e+02 4.9 0.4 2 23 953 975 952 975 0.94 15 25 0.059 16 8.6 1.6 2 22 1000 1020 999 1020 0.95 16 25 0.0021 0.58 13.2 1.0 2 23 1034 1056 1033 1056 0.95 17 25 0.017 4.7 10.3 0.2 1 23 1062 1086 1062 1086 0.98 18 25 0.14 39 7.4 0.7 2 23 1094 1116 1094 1116 0.94 19 25 4 1.1e+03 2.9 0.0 3 23 1125 1146 1124 1146 0.91 20 25 0.041 11 9.1 0.0 2 23 1182 1203 1181 1203 0.95 21 25 0.016 4.4 10.4 0.4 3 23 1258 1279 1256 1279 0.95 22 25 0.00097 0.26 14.2 5.2 1 23 1289 1313 1289 1313 0.91 23 25 1.4 3.8e+02 4.3 3.1 1 23 1386 1409 1386 1409 0.95 24 25 0.12 32 7.7 0.5 2 23 1416 1438 1415 1438 0.95 25 25 1.4 3.8e+02 4.3 0.1 2 22 1527 1548 1526 1548 0.92
Sequence Information
- Coding Sequence
- ATGTCAATTGTATCGGATAGTGTATTGCAACTTTGCCGGTTGTGCGCGTCTTACCAAGCtattaaaatggaaatttttggaAGAGAAGGCAGAGAAAGAAACCTCGTCGAGAAGATTGAAGTTTGTCTACCATTCAAGATACGCGAGGACGATGCCTTGCCCAAGTCGCTGTGCTACCGCTGCATGTACCTGCTGGAGAACTTCCACGACTTCAGGACGAACTGCGTGAACTCGGTGCGGCTCCTGGAGAGCTGCGTCAGCGACCCCGAGGGACGCAACGTGGTGCGTACCGCGGCCGCCTGTGGCACGCTCCCTCAGAGTTGCCACGACTTCCTCCGTGAGCCGGCGCTGAGGCTGGAGTTCGAGCAGCTTAAGAGCCAGCTGCACCAGATGGACTTGCAGCGCGAGAAGGAGCGACTTGACGGGGATGACTTCATGCCCCACCTTGAGCCCCAGGTCGCGGAGGGGTGTCAGCGGTGTGTGTTGTGGGTCGAGGTAACGCCCGCTTGCGACCGCTCCTGGAGCCGCCGCTCGTCGAGCGAGGGCAACCACCCCAGTCCCGGCTGCTCCCCGCCCCGGCTCGAGCGGAACGAGGAGGCCGTTTCGGAGCCGCCGTGCGACCAGGGCGCGGAGCAGGGGGACTCCGACTCCAACTCCTGGGACACCTCCCGCGTCCAGACCAGGCGGAGGCTGAATCACTCGCCGATGCACGACTGCAAGCTGTGCGGCCAGACGTTCGTGTCGTGGAGCCAGCTGAACGTGCACAAGAGGAGTCACACCCGGGACCTGGACGACGCTCCGGAGAGCGGGCCCTTCTCCTGCGACCTGTGCTGCAAGTCGTACGCGCTGCCCAAGCACCTGTGGACGCACGTGAGCACGGCCCACCGGGGGGACCCCGCCGTCACCTGCCCCCTGTGCCGGCGCGTGTGCATGAACCGCGCGCGCCTCGAGGAGCACCGGTGCTCGCACCGGGACGAGGGGGCGGAGCCCCGCCGGCACATGCAGGCCATGCTGAACACCCTGCTGAGTCGGCGCTCCTCCTCCCAGCAGTGCGCCGAGGTGAGCCTCCTGAAGCAGACCCTGCTCCGGTCGCGCTGGGACTCTGCGGAGGGCAGCTCGCAGGGACCGGACCTGCCGTCCGGGAAGCGGCCGGCCGAGGCCGCGAGCGACGCCCATTCCGGCAGCCGCAGGAAGAACTCCTGTCCGAGGAAAATATCTCGAGAGCGAGCTGTAAGCACGTGCGAAGACGCGGCAGAGGCCGTGGAACAGTTTGTGTGCGATGTGTGTTCGGTGGTGTTCGAGACAGCGCAACTTCTGGCAGACCACAAAGTAGTTCACAAAATTGCTGAAGAGACAGCCCCCGTTGTTACCGTCAAAGAAAGGCCTTTCACCTGCCTGCTGTGTGAAAAAAGCTTCACGCTGCGTCAGTCTCTGAGTAGGCACCTCCTGTCTTGCCATGGCATAGATCCCCAGGATGTGATGAGTACGTTAAAGAAAACACCTGAAGCCAAAAAATATAGTTTTCCTAACACAGATGACTCTGCTGCTTTTGACGTAGCCATGTTGATGAAACGGGAATCCACGGAGGAACAGTCAAACAAGAACTTCTTCTCGTGCGAGGTGTGCATACGGGAGTTCAACGACCGCTCCAGTCTGTGGCTGCACATGCTGTACGCACACAAGGACCAAGCGATGTATGCCTGCGGTGTCTGCCTGAAGGTGTGTGCCAACAACGACCAGCTGATGGTGCACTGGAAGGAGCACATCAACGTGTGTGAGCAGCGGCGGTACATCTGCCAGATCTGCGGTCGCCAGCACGACACGCGCAAGAAGTTGGTCATCCACGCCGGCTTGCACTGCCTCGACGACGGCAGGGGCGGCTGCTACGACCCGGAGGCCATCGTGTTGCAGAACCACGCGTTCTACAACCCGGAACAAAAAGGGAAAGATGCCGAAGGAAGCTTGGACACGAACAGCCTCGAGAGCAAGTCGGAAGGCGCGGTGGGCTTGGACACAGCGAGCGACAGCTTCACCTGCGAAGTGTGCTGCAAGACGTTCCTGTCGGAGGAGAAGCTGGTGAAGCACAAGAAGAACTCCCACAAGGAGGAGACGTCCATCAGCCTGTACAGGGGCACGTACCAGCTGTTCTTCGTGTGCGAGCTGTGCGGGTCGTCCCACCACAGTAAGTCGGAGCGGTGGCGGCATGTCTACAAGTGTCACGGGGGCGAGGCGATGCTGCGCTGCGATCGGGGGTCGTGCGAGAAGGTGTTCACGACGCGAGCCTTGCGGCACGAGCACTGCGCCAGCCACCACCAGCTGCAGGGTGACACGCCGAACACCTGCGAGGTGTGCGGCAAGCTGTGGAGCTCCCGCGTCGACTTCTGGAAGCACATGATGGGCGTGCACTCGGACCTGGTGCCCTTGACGTGCGGGGTGTGTCTGAAGATCCTCTGCGACGTGGCGGAGCTGAAGCTCCACGTCAGGAGGAAGCACTGGCCACTTGTCGGAGACTACTGCTGCGACATCTGTGGGCGAGCGTATTCCAACCAGTCCAAGATGTCGAGGCATCGCAAAGTTCACGAAGAGTTGGCTGCAAGTAAAGGTCATTCAGAGTATAGTTCTTCAGCTGTAAAGAAACAATTAAAGGTGAATGTTAAAAGCGAGAGCAAACCATATTTGCCCTCCCTGTGCTGCGACGCCTGCCCTGAACAGCAATTTGGCAGTATTTCTCAGCTCGCAGAGCATCGCCGAAATGCTCATTCCTTGTACCCTTGTGACATCTGCACCAAGTTTTACGGGCGTACGACACATCTTCTCAACCACGTAAGGAGAAAACATAAAGATGAACCACAACTGATGTGTCCCCTCTGTTCGAAACTGTGCAGTAGCAGCGTGGCCATCTCGTCCCATATAGCGAAGAATCACACCCCCAGAGACGATCAAGTTAAGGCGAAGAAGCTTCCGGCATTCAAGGCGGTGAAAGGTACGTACGGGCAGAAATGCTCTTACTGCTCAAAGACGTTCTGGAAGCGCTCAGTTTACCGCAAGCACATAAGAAGCTGTCGCAACAAGACGGTGGCGGATGTATCGTCCGTTCAGACCTGTGAGCTATGCGATGTCTCGTGCTCTTCGAAGACGGAGCTGGTGCAGCACATTCGTGCACGGCACTTGGGTCACCCTAACTTCACCTGCAGTTTCGGAGAGTGCTCGCGCGTTCTACGCTCCCTCGTGGACCTGGAGATGCACTTGAAGATGCACACCATGGACGTGGGTACGGCCACTTGCGACTTGTGCGGGGAGGTGTACGACAGCAAGCCCAAGATCTGGAAGCACCTGTACAGCTGCCACCGGCTGAAGGACTTGGAGGGGCTGTGCGGTATCTGCCTCAGGGCACTGCCCAGCGTCGACGAGCTGAAGGCACACCTGGACGCGGCACACCCGGGAGCCCGCGACAAGCCCAACACCTGCAGGCTGTGTGCCAGGACCTACACCGGTGCCTACAAGGTTCTGCTCCACGTCGCCAAGTGCCACGCTTCCTACTCGGTGTGCAAGATCTGCTTGGAAATGTTTGCAGACCCCTCGGAGATGGCAGTGCACGAGGGGACCCACGCGGAGACCCCGGAGGGCGAGGCTAGCGACGAGCACGAGGAACCGGACACCGCGGAGCCCGTGCCCGAAGAGACCTCCACGGAGCGCATTCCGGAGAAGAGGCAGTCGGTGGAATCGGGGGAAGCTGGGATCCTGGGGAAAAGACCAAAACGGTCGTACGGCTGCGATCTGTGCACTCGGGTGTTCCAGTCGCCGTCCGCGTTGTCCGAGCACAAGAAGCAGTTCCACTTGTCGACGGCCAGCGACTACAAACCTTACCACTGCAGCACGTGCAGCAAGCACTTCTCCAACAAGACAAACTACTGGAAGCACATCAACTCCCCCTCGCACGCCAGCATGCGCAAGATGGCGGCAGGCACTCCGAGCCAAGGGGAGGTGTTCGCCCAGGAGGATAGCAGAACCTCGTACGTTGGAAGCGAAGGCTTCGACTCGAGTCGCAGCCTGCAGGAAGAAGAGAGCTTGGACCAGGAAGAAGCGCACGGCGCCGCTAGGCGGAGGTCCGACACGCGCAAGGTGTACGCTGCAGACGCGACGGTCGCCGGGCCGTACTTCTGCTGTCTGTGCGGCAAGAAGTGGCCCGGCCGTAAGCACCTGTGGCAGCACCTGATTCGCAACCACCGGAACGAGGCTGCCGTCACGTGCGGAGTCTGCCTCACGGTGTGCTCCGACTACCAGGACCTGTCGCGCCACCTGTCCATCCAGCACCCGGGCAACTTCCTGGGCGACGGGAACAACTTCACCTGCAGGACGTGTGGCCGTTACCACAACGCGCGCTGCAAGCTGCTTCAGCATGTGCTGATCCACATCGTGCTGGGTCCGGGTCCCGAGAAGCAGCCCCCGTCGCTCACGGAGCTCATGGAGGCCCAGGGGGCCAGAGGAGAGGACCAGGCTTCACCGCGCGAGCAGTTTCAGGAAGCTGGTGACTCTGAGCCAGAGAGCGCAGGCTTTTTGTCTGCTTACATCGAGTTAACGTGCCAGCAGTGTGACAGTGCATCATTTGACTCGTTGGAGGACCTTCTGAAGCACCAGGAAACCTGCCAGGGGGCCGCGGGGTCGGAGAAGAAACAGGAGTCTCTGGTGGAGGAGACCGCGGACTCCTCGCAGAGCAGCAGTGACGACAGCGACAGCAGCTCGTCCGGCTCCAGCTCCGACAGTTACATCGCCGAGAATGGTGTTGGGGATGGCGATGAGGATGTTTTACCAGAGTGTGTGGACTACGAAGTGTTTGGTGATGAAGTGAAGCTCGGTCAGAAAGTGCGACCGAACACTCCAAGCATAATAAATACCCCTCAGAGCGTCGTCGATGAGAGTGCGAGTCCTGCGATGGGTGATGTCGACTTGATGGATGGATCTTATTTCGAAGAAGAAAGCTTGGAGAACATGAGCTACGACTCTAAAGGGTGTATCCGGGTGGCCTTTCGTGTAGGAGAGGAAGACCTTTCGTCGGAGAAGTTAAAACAGGCGAAAAGTGGCTGTGATGTCGTACGAGACGAAACGAGCGTCTGTGCGGTGGGCTCTGCTGCAGGCGGGTGCGGAAGTGGCCAAGTTGACCGTTGTGCGGACGCTGTGAGCAACGGTCTTCCCGAGGACGCAGGCAGTCCGGTCGAAGCTGCGGACGGTGGAGGGACGTGTGTGGTAGATGAGGTGGGTGTCGCTGGTGACTTGTTGAGTGACAGTCTGAACTCGCTAGGCATGCTGAATGCCGTGGAATCCGTGGACATGTGA
- Protein Sequence
- MSIVSDSVLQLCRLCASYQAIKMEIFGREGRERNLVEKIEVCLPFKIREDDALPKSLCYRCMYLLENFHDFRTNCVNSVRLLESCVSDPEGRNVVRTAAACGTLPQSCHDFLREPALRLEFEQLKSQLHQMDLQREKERLDGDDFMPHLEPQVAEGCQRCVLWVEVTPACDRSWSRRSSSEGNHPSPGCSPPRLERNEEAVSEPPCDQGAEQGDSDSNSWDTSRVQTRRRLNHSPMHDCKLCGQTFVSWSQLNVHKRSHTRDLDDAPESGPFSCDLCCKSYALPKHLWTHVSTAHRGDPAVTCPLCRRVCMNRARLEEHRCSHRDEGAEPRRHMQAMLNTLLSRRSSSQQCAEVSLLKQTLLRSRWDSAEGSSQGPDLPSGKRPAEAASDAHSGSRRKNSCPRKISRERAVSTCEDAAEAVEQFVCDVCSVVFETAQLLADHKVVHKIAEETAPVVTVKERPFTCLLCEKSFTLRQSLSRHLLSCHGIDPQDVMSTLKKTPEAKKYSFPNTDDSAAFDVAMLMKRESTEEQSNKNFFSCEVCIREFNDRSSLWLHMLYAHKDQAMYACGVCLKVCANNDQLMVHWKEHINVCEQRRYICQICGRQHDTRKKLVIHAGLHCLDDGRGGCYDPEAIVLQNHAFYNPEQKGKDAEGSLDTNSLESKSEGAVGLDTASDSFTCEVCCKTFLSEEKLVKHKKNSHKEETSISLYRGTYQLFFVCELCGSSHHSKSERWRHVYKCHGGEAMLRCDRGSCEKVFTTRALRHEHCASHHQLQGDTPNTCEVCGKLWSSRVDFWKHMMGVHSDLVPLTCGVCLKILCDVAELKLHVRRKHWPLVGDYCCDICGRAYSNQSKMSRHRKVHEELAASKGHSEYSSSAVKKQLKVNVKSESKPYLPSLCCDACPEQQFGSISQLAEHRRNAHSLYPCDICTKFYGRTTHLLNHVRRKHKDEPQLMCPLCSKLCSSSVAISSHIAKNHTPRDDQVKAKKLPAFKAVKGTYGQKCSYCSKTFWKRSVYRKHIRSCRNKTVADVSSVQTCELCDVSCSSKTELVQHIRARHLGHPNFTCSFGECSRVLRSLVDLEMHLKMHTMDVGTATCDLCGEVYDSKPKIWKHLYSCHRLKDLEGLCGICLRALPSVDELKAHLDAAHPGARDKPNTCRLCARTYTGAYKVLLHVAKCHASYSVCKICLEMFADPSEMAVHEGTHAETPEGEASDEHEEPDTAEPVPEETSTERIPEKRQSVESGEAGILGKRPKRSYGCDLCTRVFQSPSALSEHKKQFHLSTASDYKPYHCSTCSKHFSNKTNYWKHINSPSHASMRKMAAGTPSQGEVFAQEDSRTSYVGSEGFDSSRSLQEEESLDQEEAHGAARRRSDTRKVYAADATVAGPYFCCLCGKKWPGRKHLWQHLIRNHRNEAAVTCGVCLTVCSDYQDLSRHLSIQHPGNFLGDGNNFTCRTCGRYHNARCKLLQHVLIHIVLGPGPEKQPPSLTELMEAQGARGEDQASPREQFQEAGDSEPESAGFLSAYIELTCQQCDSASFDSLEDLLKHQETCQGAAGSEKKQESLVEETADSSQSSSDDSDSSSSGSSSDSYIAENGVGDGDEDVLPECVDYEVFGDEVKLGQKVRPNTPSIINTPQSVVDESASPAMGDVDLMDGSYFEEESLENMSYDSKGCIRVAFRVGEEDLSSEKLKQAKSGCDVVRDETSVCAVGSAAGGCGSGQVDRCADAVSNGLPEDAGSPVEAADGGGTCVVDEVGVAGDLLSDSLNSLGMLNAVESVDM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -