Bros095881.1
Basic Information
- Insect
- Bacillus rossius
- Gene Symbol
- Thap4
- Assembly
- GCA_032445375.1
- Location
- JASMSR010000005.1:33261282-33307619[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 6.8e-06 0.0019 21.0 0.8 1 23 154 176 154 176 0.98 2 14 0.00026 0.069 16.1 0.2 1 19 181 199 181 203 0.93 3 14 1.2 3.3e+02 4.5 0.2 1 23 208 230 208 230 0.92 4 14 1.1e-05 0.003 20.4 0.8 3 23 234 255 233 255 0.97 5 14 0.00078 0.21 14.5 0.1 2 23 288 310 287 310 0.95 6 14 0.16 43 7.3 6.5 1 21 310 330 310 331 0.93 7 14 1.7 4.5e+02 4.1 0.4 2 12 390 400 389 402 0.85 8 14 6.8e-06 0.0019 21.0 0.8 1 23 568 590 568 590 0.98 9 14 0.00026 0.069 16.1 0.2 1 19 595 613 595 617 0.93 10 14 1.2 3.3e+02 4.5 0.2 1 23 622 644 622 644 0.92 11 14 2.2e-05 0.0061 19.4 0.8 3 23 648 669 647 669 0.96 12 14 7e-05 0.019 17.8 0.7 2 23 702 724 701 724 0.95 13 14 0.0068 1.8 11.6 9.3 1 23 724 746 724 746 0.98 14 14 0.088 24 8.1 3.1 1 20 772 791 772 793 0.94
Sequence Information
- Coding Sequence
- ATGGACAGCAAGAAGAAAACGAAGAGGAGAGCGGTCCACAAGAAGAACTGGAGTCCGACCACGAACAGCGTACTCTGCTCGGACCACTTCACGGAGGACTGCTTCGATAGGATCTCCAGCTTCATGGTCAGGATGCGGGAGTACGCCGTGCCGTCTGTGTTCCCGGCCTTCCCGGACCACTTGAAGAAGggtgtggcggcggagtgcggcgacggagacccacgaggggtgctgcggtcagagttgcgccggaagtgcggcccagagAGGTGTGTGAAACAACAAGCGCCTGCCGGGAAGGAAGCTTCCAGGGAGGACGGGACAGAGCCGACGTCAGGGGAGGCCTACTCCCACGAGACGAGCGACGCCCAGGTGGTCGGCGGGAAGGCGTGCCCCCAGCACCGGGAGGGTGACCGCTTGTTCCCCGGCACGAGGCGCGGGGTGCAGCTGGAGCGACAGTACGTGTGCCCCACGTGTGGCAAGGCGTTCCGCGACGGCTCCGCGCTGCACCACCACCAGGACATCCACCGAGACATCAAGTACACGTGCAAGGAGTGCGGGAAGGTGTACGGCAACCGCAGCGGGCTGTACTGGCACGCCTGGACGCACCGCAACGCCACGTTCCTGTGCCCGGTGTGCGGCGAGCTGGTGCGCAAGGGCAGCTCGGTGTACACCCACAAGATGAAGCACGCAAGAGCCTGTCATTGGTGCGGAGAGAAGTTCAGCGACTGGAAGCTACTGAAGGCACACCTAAACTCGAGACACAAATTCTGTCCCAACAAGTGCACCTGCTGCACAAAGCTGCCCCCAGATTCAGACTGGAAGTCAGATGTTCTTGCATCACCGTGCGAGGACCAGTGGAAGTGCGAGTATTGCGTGCTGGCGTTTGCCAGCCGGTCCGCCCTCAACATTCACCTGGCGCGCAAGCACAGGTGCCACACCTGCCTGCAGTGTTTCAAGAACGAGTTCGAACTGAACGCCCACGAGTGCACGCTTAGGAGAAAAGGGAACCCCAGAGTAAAAGAAACCAGGCGTCGCAAGGTCGCATCGGCGCCTGCGAAGCAAGAGATGCACAAGATTTTCACTTGTGATTGGTGTGGGGATGTGTTCTTCCATATCTTCCGCTACTGCAAGCACAGAGGGAAATGCAAGAGCTTGCAGAAATGGGAGTGCCAGAAGTGTGGTAAAGTGTCGAGGGATAGGTTTCCGAAGGATGCAGCGAGACGGGCTGCGTGGATTGAGGCGGTCCACAGGAAGAACTGGACTCCAACCAAGAACAGCATGCTCTGCTCAGACCACTTCACCGAGGACTGCTTTGACAGGACCTCTCTCTCGGTGGTCAGACTGCGGGAGTACGCCGTGCCGTCTGTGTTCCCAACCTTCCCGGACCATTTGAAGAAGCCAGTACCTGCGCTGTCAGAAACTGCAGTCACCAGGCCTGTGTTGGTACCCTCAAGTGCCTCTGTGGGATCGACCCCTGTGATCCCAAACGGCTCGCTGCAGGCTGAGTCGAGCACTACAGTTACAGGGCGGGCGCCCGTGAAGCAAGCATCTGCGAAGAGGGCAGAGCCGACGTCAGGGGAGGTCTACTCCCACGAGACGAGCGACGCCCAGGTGGTCGGTGGGAAGGCGTGTCCCCAGCGCCGGGAGGGTGACCGCTTGTTCCCCGGCACGAGGCGCGGGGTGCAGCTGGAGCGACAGTACGTGTGCCCCACGTGTGGCAAGGCGTTCCGCGACGGCTCCGCGCTGCACCACCACCAGGACATCCACCGAGACATCAAGTACACGTGCAAGGAGTGCGGGAAGGTGTACGGCAACCGCAGCGGGCTGTACTGGCACGCCTGGACGCACCGCAACGCCACGTTCCTGTGCCCGGTGTGCGGCGAGCTGGTGCGCAAGGGCAGCTCGGTGTACACCCACAAGATGAAGCACGCAAGAGCCTGTCATTGGTGTGGAGAGAAGTTCAGTGACTGGGAGATGCTAAAGGCACATAAAAGATTGAGACACAAGAACTGCCCCAACAAGTGCACCTGCTGTGCAAAGCAGTCTGCAAACACCGACCGGAAGTCTGACGTTCTTTCGTCACCATGCAAGGATTGGTGGGAGTGCGAGTTCTGCGGATGTGCGTTTGCCCGCCAATCTGCCCTCAGCATCCACATGACGCGCAAGCACAGGTGCCACCACTGCATGCAGTGTTTCAAGGACAAGTACGAACTGAGCGCCCATGAGCGCACGCACATGAGGGAAGGGAATGCCGAAGACGAAGATGACAAGCCTCACAGTGTAGCGTCGGCACAAGATTCTTACACTGTGTTCACGTGTGATGGATGCGGGGAAGTCTTCTTCCACGTCCACCGCTACTGCAGGCACAGAGCAGAATGCAAGAGTCTGCAGAACTGGGAGTAA
- Protein Sequence
- MDSKKKTKRRAVHKKNWSPTTNSVLCSDHFTEDCFDRISSFMVRMREYAVPSVFPAFPDHLKKGVAAECGDGDPRGVLRSELRRKCGPERCVKQQAPAGKEASREDGTEPTSGEAYSHETSDAQVVGGKACPQHREGDRLFPGTRRGVQLERQYVCPTCGKAFRDGSALHHHQDIHRDIKYTCKECGKVYGNRSGLYWHAWTHRNATFLCPVCGELVRKGSSVYTHKMKHARACHWCGEKFSDWKLLKAHLNSRHKFCPNKCTCCTKLPPDSDWKSDVLASPCEDQWKCEYCVLAFASRSALNIHLARKHRCHTCLQCFKNEFELNAHECTLRRKGNPRVKETRRRKVASAPAKQEMHKIFTCDWCGDVFFHIFRYCKHRGKCKSLQKWECQKCGKVSRDRFPKDAARRAAWIEAVHRKNWTPTKNSMLCSDHFTEDCFDRTSLSVVRLREYAVPSVFPTFPDHLKKPVPALSETAVTRPVLVPSSASVGSTPVIPNGSLQAESSTTVTGRAPVKQASAKRAEPTSGEVYSHETSDAQVVGGKACPQRREGDRLFPGTRRGVQLERQYVCPTCGKAFRDGSALHHHQDIHRDIKYTCKECGKVYGNRSGLYWHAWTHRNATFLCPVCGELVRKGSSVYTHKMKHARACHWCGEKFSDWEMLKAHKRLRHKNCPNKCTCCAKQSANTDRKSDVLSSPCKDWWECEFCGCAFARQSALSIHMTRKHRCHHCMQCFKDKYELSAHERTHMREGNAEDEDDKPHSVASAQDSYTVFTCDGCGEVFFHVHRYCRHRAECKSLQNWE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00189105;
- 90% Identity
- iTF_00189105;
- 80% Identity
- iTF_00189105;