Basic Information

Insect: Bacillus rossius
Gene Symbol: -
Assembly: GCA_032445375.1
Location: JASMSR010000011.1:6223844-6235438[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0031 0.83 12.7 0.3 2 23 571 592 570 592 0.96

2 11 7e-06 0.0019 21.0 0.3 2 23 599 620 598 620 0.97

3 11 0.00019 0.052 16.5 0.9 1 23 626 648 626 648 0.97

4 11 1.4e-05 0.0037 20.1 2.8 1 23 656 678 656 678 0.98

5 11 6.9e-06 0.0019 21.0 0.5 1 23 684 706 684 706 0.98

6 11 0.001 0.28 14.1 3.7 2 23 716 736 715 736 0.96

7 11 0.0046 1.3 12.1 0.4 1 23 745 768 745 768 0.94

8 11 4.3e-05 0.012 18.5 1.6 3 23 776 796 775 796 0.99

9 11 2.4e-06 0.00065 22.4 0.5 1 23 826 848 826 848 0.98

10 11 0.0052 1.4 12.0 5.2 1 19 854 872 854 875 0.94

11 11 0.055 15 8.7 0.2 1 23 923 945 923 945 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0031	0.83	12.7	0.3	2	23	571	592	570	592	0.96
2	11	7e-06	0.0019	21.0	0.3	2	23	599	620	598	620	0.97
3	11	0.00019	0.052	16.5	0.9	1	23	626	648	626	648	0.97
4	11	1.4e-05	0.0037	20.1	2.8	1	23	656	678	656	678	0.98
5	11	6.9e-06	0.0019	21.0	0.5	1	23	684	706	684	706	0.98
6	11	0.001	0.28	14.1	3.7	2	23	716	736	715	736	0.96
7	11	0.0046	1.3	12.1	0.4	1	23	745	768	745	768	0.94
8	11	4.3e-05	0.012	18.5	1.6	3	23	776	796	775	796	0.99
9	11	2.4e-06	0.00065	22.4	0.5	1	23	826	848	826	848	0.98
10	11	0.0052	1.4	12.0	5.2	1	19	854	872	854	875	0.94
11	11	0.055	15	8.7	0.2	1	23	923	945	923	945	0.97

Sequence Information

Coding Sequence: ATGGGCGGTTGGTTGCTGGAAGTGGGCAAGATGGCCCTGTACATGGCGTTCCCCGTCGGGATGTTCCACTTCTTCAACCAGCCCGAGTACTTCGAGGAGTGGGTGGTGAAGACGCGGCGCGCCATATTCCCCCCCGACAGCAAGACGCACCGCGAGGAGCTGGAAGCGTGCATGCGCCAGATGCAGCAGAGGCGCGACCGGGAGCTGATGCGCCAGCTGGAGGAGAGCGACGAGTCTCAGTGTGCCATGGCGGAGACGACGGACTCGTCCGTGGTGGAGATAGTGTGCGAGGCGCACTTTGCGCGGCTCACCTCGGCGCTGAAGGAGCTGGCGACCGCGGGCGTGCTCACGGACATCACGTTCGTGTGCGAGGACGGCACGCTGCAGGCGCACCAGGTGGTGGTGTCGGCGTTCAGCAGCTCGCTGCGCCAGGTGGGCGGCCGCCGGAGCTGCGTCCTGGTGACGGGCGCCCGCAAGCCGGCCGTGCAGGCGCTGCTGCACCTGCTCTACCTGGGCCACGCCCGCGTCGGCGCGCACGAGCTGGAGGCCGTGGCACAGGCGGCCGCGGCCCTCGGGCTGGACTGCTTCGCGCGCACGCGGGTGGAGCCCGCGGGCGACGAGGTGCGGCTCTCCTTCCCGGACCACGAGCGCTGCCTCCGGGAGAGCCTGCAGCGCGCGCGCTCCGGCGCGGCCCTCTGCGACGTCGTCTTCGTGACGGCGGAGTTTGCGCAGGTGCACGCACACGCCTGCGTGGTCGCCACGTGCAGTGACGTGCTGCGGGACGTGCTGGCCGGCCGCCGGCGCGACGACGGCCCGTGCGTGCTGGTGCTCGAGGGCACGGAGCTCCGGCACCTCTCGCCCATCCTGGACCTGTGCTACCGGGGCGACGTGCTGCTGGCCCAGGGGACCATCGGCGAGACGCACGCCACCGCGCGGCTGCTGGGCGCGGACTACGTGTGCGAGATACTGGGGGCGGCGGAGCCCACCCTCGGCGTCGCGGCGACCGCGGAGGAGGCCGAGCCCCGGGCCGCCGGCACGGTGCGTCTGCAGGACGGCCGGGACGGCTGCCGCGGCTTCCGGCGGCTGCTGGCCCACCTGGCCGGCACGGAGAGTCTCGCCGACGTGACGCTGCTGAGGAGCGGGCGCTGCCTGCGTGCGCACAGCGTGCTGCTGTGTGCCTTCGGGCCGTACTTCAAGCAGCTGGAGGGGCGGCTGGGGCACCAGCTGAAGGAGGCCGTGGTGCTGGTGCGCAGCCTGACGGCGGGCCAGCTGCAGGCCTGCCTCGACTACCTGTACCGCGGCGAGGCCCGCTTCTCGGGCGGCCCGCGCCAGTTCTGCTCGCTGCTCTCCCACTGGATAGACTTCAGCCTGCTGCCGGCCGAGGAGGCCAGCCTCCTGCCCTGCCGAGGCGTGTCGGTGGAGAAGACGTGCGAGGCGCTGGGGCTGTCGCTGGACAACATCAGCTGCGTGGTGGAGCTGTCCGAGGAGTTCAACCTGGGGCGGGACGCCGTGCTGCTGCAGGACGACGGCGAGACGGCGGAGCTGACGCCCGCCGCCGAGACCCAGGTCCTCGCGCACCTCGTGTTTCTGCTCCCGGAGTGTAAGAAGACTGAGGAGAGAGAGTCTCGCTGGGTGGAACTGAAGGCCCTGAAGGTGGAAGCAGGCGGCGGAGACCCGCGCGCCAGGTCGCCCGCCAAAGCAGCCACTAAGGTGTGCAGCCTGTGCAAGGAGGAGTTCACGTCCCTCGCGGAGTTCAGTCGCCACCTGGCCAGCCACCCCGAGTCCAAGTGGGTGACGTGCGAGCACTGCAGCCAGGCGTTCGCCACGGCGGGGGAGCTGCGCGTGCACATGCGCTCCCACGCCGAGCTGCGCCCGTTCCCGTGCGGCGTCTGCGGCAAGCGCTTCGCCACGCGCTGCGTGCTGCGCAAGCACGGGCGCGCGCACGACGGCGACCCCGCCAAGGCGCACCGCTGCCCCGTCTGCTCCAAGTCCTTCCAGCGCCGCGAGTACTATGCCGAGCACATGCGCACGCACACGGGGACGAAGCCCTTCGAGTGCCCGACGTGCGGCAAGGCCTTCGTCGGCCGCACGGGCCTCAACCACCACGTCAAGACGCACGCCGACCCGGACGCCCGCCGCAACTGCGCCTGCGAGGTGTGCGGCAAGCACTTCACCCGGCACGCCCTCTGGGCGCACGTCAGGACGCACGAGAAGCCGGCGCGCAGGAAGGCGCACGCCTGCGGGACCTGCGGCCAGGCCTGCGGCACGGCCTCCGCGCTCAGGACGCACGTGCTGCGCGCGCACGAGAGCCGGCCCGAGCACGGCTGCCACGTGTGCGGCAGGAGGTTCGGCAGGCAGCGGGACCTGCTGCGGCACGCCCGGTCGCACGAGCGGGACAAGGAGTCCCGCCACCCGACGGAGGCCCAGCTCGGCAGGCACACGCTCCTGAGCCACGAGGCGCCCGGGGATTTGCCGTTCTCCTGCGGCGTCTGCCGCAAGTCCTTCGCCGACCGCTCCTCGCTGGCCAACCACCTGCGCTCGCACACGGGCGAGCAGCTCCACACCTGCCGCTCCTGCGGGAAGACCTTCTGCCGGCCGCATGCCTTCAAGAAGCACGAGGACTCCTGCGGCGGGGCGGGACCGCGCCACAAGTGTCCGTGCTGCGAGGAAACATTCCTCAATGTGGCCGCCAGAAACAAGCATGTGGCGTCGTGCCACGAGATGGACGCTGCTTCGGACGGTAAGGACTTCTCCGGCTCCGAGCCTTTCCGCTGCGCCGTGTGTCGGACGTCGTTCCTCTACCAGGAGAGCCTGGAGAATCACGCCGAGGTGCATGCGGGGGGCGGGAGTGCCGAGGCCCCGGTGGTACCCGACCACGGCTACGCGGGCGAGACGGCCGTCGACGACCCGGCCGGGGCACTCCGCGAGCAGTCGCAGGAGGCCGGCGTGAAGACGCGCCAGCCCTTCATGATCACCATCGACGGGAACTTGACGTACGATCCGAGCAACAAAGTGCCAGATGGCATCTTCGAAGTGATGTCGCAGTCTGCGGCAGCATCTGTCCAGGACCTCAATACATCGTGGAGTTTGTCGGAGTAG
Protein Sequence: MGGWLLEVGKMALYMAFPVGMFHFFNQPEYFEEWVVKTRRAIFPPDSKTHREELEACMRQMQQRRDRELMRQLEESDESQCAMAETTDSSVVEIVCEAHFARLTSALKELATAGVLTDITFVCEDGTLQAHQVVVSAFSSSLRQVGGRRSCVLVTGARKPAVQALLHLLYLGHARVGAHELEAVAQAAAALGLDCFARTRVEPAGDEVRLSFPDHERCLRESLQRARSGAALCDVVFVTAEFAQVHAHACVVATCSDVLRDVLAGRRRDDGPCVLVLEGTELRHLSPILDLCYRGDVLLAQGTIGETHATARLLGADYVCEILGAAEPTLGVAATAEEAEPRAAGTVRLQDGRDGCRGFRRLLAHLAGTESLADVTLLRSGRCLRAHSVLLCAFGPYFKQLEGRLGHQLKEAVVLVRSLTAGQLQACLDYLYRGEARFSGGPRQFCSLLSHWIDFSLLPAEEASLLPCRGVSVEKTCEALGLSLDNISCVVELSEEFNLGRDAVLLQDDGETAELTPAAETQVLAHLVFLLPECKKTEERESRWVELKALKVEAGGGDPRARSPAKAATKVCSLCKEEFTSLAEFSRHLASHPESKWVTCEHCSQAFATAGELRVHMRSHAELRPFPCGVCGKRFATRCVLRKHGRAHDGDPAKAHRCPVCSKSFQRREYYAEHMRTHTGTKPFECPTCGKAFVGRTGLNHHVKTHADPDARRNCACEVCGKHFTRHALWAHVRTHEKPARRKAHACGTCGQACGTASALRTHVLRAHESRPEHGCHVCGRRFGRQRDLLRHARSHERDKESRHPTEAQLGRHTLLSHEAPGDLPFSCGVCRKSFADRSSLANHLRSHTGEQLHTCRSCGKTFCRPHAFKKHEDSCGGAGPRHKCPCCEETFLNVAARNKHVASCHEMDAASDGKDFSGSEPFRCAVCRTSFLYQESLENHAEVHAGGGSAEAPVVPDHGYAGETAVDDPAGALREQSQEAGVKTRQPFMITIDGNLTYDPSNKVPDGIFEVMSQSAAASVQDLNTSWSLSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00189140;
90% Identity: iTF_00189140;
80% Identity: iTF_00189140;