Basic Information

Insect: Bacillus rossius
Gene Symbol: -
Assembly: GCA_032445375.1
Location: CM063650.1:20755402-20771725[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.6 4.3e+02 4.2 0.1 2 21 80 99 79 102 0.78

2 14 0.00044 0.12 15.3 0.2 1 23 141 164 141 164 0.96

3 14 0.012 3.3 10.8 0.3 1 23 170 192 170 192 0.97

4 14 1.6e-05 0.0043 19.9 2.5 1 23 198 220 198 220 0.96

5 14 0.0015 0.42 13.6 2.0 1 23 229 251 229 251 0.96

6 14 2.9e-06 0.00078 22.2 1.2 1 23 257 279 257 279 0.96

7 14 7.2e-05 0.02 17.8 5.8 1 23 285 307 285 307 0.99

8 14 0.00069 0.19 14.7 0.5 1 23 313 335 313 335 0.99

9 14 0.0019 0.51 13.3 1.3 5 23 393 411 387 411 0.96

10 14 4e-06 0.0011 21.8 1.3 1 23 417 440 417 440 0.98

11 14 0.023 6.3 9.9 1.3 1 23 446 468 446 468 0.98

12 14 1.8 4.9e+02 4.0 0.3 5 23 502 520 501 520 0.93

13 14 2.2e-06 0.0006 22.6 0.4 1 23 526 548 526 548 0.98

14 14 1.4e-06 0.00039 23.1 2.7 1 23 554 576 554 576 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.6	4.3e+02	4.2	0.1	2	21	80	99	79	102	0.78
2	14	0.00044	0.12	15.3	0.2	1	23	141	164	141	164	0.96
3	14	0.012	3.3	10.8	0.3	1	23	170	192	170	192	0.97
4	14	1.6e-05	0.0043	19.9	2.5	1	23	198	220	198	220	0.96
5	14	0.0015	0.42	13.6	2.0	1	23	229	251	229	251	0.96
6	14	2.9e-06	0.00078	22.2	1.2	1	23	257	279	257	279	0.96
7	14	7.2e-05	0.02	17.8	5.8	1	23	285	307	285	307	0.99
8	14	0.00069	0.19	14.7	0.5	1	23	313	335	313	335	0.99
9	14	0.0019	0.51	13.3	1.3	5	23	393	411	387	411	0.96
10	14	4e-06	0.0011	21.8	1.3	1	23	417	440	417	440	0.98
11	14	0.023	6.3	9.9	1.3	1	23	446	468	446	468	0.98
12	14	1.8	4.9e+02	4.0	0.3	5	23	502	520	501	520	0.93
13	14	2.2e-06	0.0006	22.6	0.4	1	23	526	548	526	548	0.98
14	14	1.4e-06	0.00039	23.1	2.7	1	23	554	576	554	576	0.99

Sequence Information

Coding Sequence: ATGAAGAATGATACTGTCTTGGAGGACAGCTGCGTCACCTTGAAGAACGACATGAACGACATGGTTTCTGGTGGCAAGTACCAAGTCAGCAAAGTGGTGGACGTGTGCGTCGAATCGATGGACCCGGGGCAGGACTCCAAGACCACGTTCAGGATGGAGCTGTGCAGAGATGTGGAGAAGGACGGCTCGCAGTCCGGGACCGAAGGCGGGGAAGAGGAGAAAGATCCCGTGGTGTGGAAGTGCAAGATCTGCGGGCACGTCGCGGACGGCGTGTCCGGCCTGCTGGACCACGGACAGGCGGAGCACTGCTCCGTTCGTCGGGGCTGCCGTTCCTGCAGCGCGGTGTTCGACGGCCCCGCGGCCCAGTCCGACCACGAGTGCGGTCGCGGGCGGGACGCCGGCGGCAGGCTCCCGGCAAAGTTCGTGTGCGACGCGTGCGACAAGGGCTTCCGCCTGAAGAAGGCCCTGAGGGAGCACTTGCTGCGCGCGCACTGCGCGGAGTCGCCGTTCAAGTGCGGCGTCTGCCGCAAGACGTACGGCTCGCACGCCGGCCTGGACATCCACGCGGCCACGCACTCCTCGGAGACGCCGTACCTCTGCGACGAGTGCGGGAAGAGCTTCAAGCACATCACGAACCTGCGCGGCCACAAGCGCTCCCACCTGGCGGCCGGCCTCAAGAACACGCACGCGTGCCGGCTGTGCGGCGCCGGCTTCCGGTCGCGCTTCCACCTCTCGGAGCACCTGAACGTGCACGAGGGCAGGAAGCCCTACGCGTGCCAGGACTGCGGCAAGGGCTTCTCCAGGAAGATACAGCTGAGGCAGCACAGGTTCTCCCACTCCGCGGCCCGGCCCTTCAAGTGCCACCTGTGCAGCGCCTGCTTCAACCGCAGCGGCAACCTCACGCAGCACGTCAAGAGGCACTTCAAGGAGAACAAGTTCACTTGCAAGGTGTGCAACTCTGCGTTCTCGACGATGGGCGAAGTGGTGACACATCGCAGGACGCACACACAGGAGGAAGTGGAGAGGAGCATCGTTAATTCAGTGGACGTGCCAAGTTTGGCAGAAAAACACAAGTGCAAGacgactccaggtgaccgacgccagtcctgcgggagtaccagcagcacgagaggaggtgcatcgagacggagacccaaccagcgacatcggaggagaacatgTGGGAAGATGCTTGCAAGAAAAGAATCCCTCGTTAGTCACATGAGAATGCATTCTGGGGAGAAAATGTTTGAATGCAAGATTTGTGGCAAAAAGCTTTCCAACAAAGGCTCTCTAAACTACCACCTGCGTTCTTTCCACACTGGCGAGCGACCCTATGCCTGCCAGTTCTGCGGCGACTGTTTTGTGTCGAAGGAGTCTCGTGTGGTGCATGAAAGAACACACACTGGTGAGAAGCCATACAAGTGCCAGGTGAGGCCCGCAAGCTGCCTTCGCTATTGGATAAGCCGTGAAAATGTATTTGTGCGAAAAGGCGTCTGGAAGGTGTGCGACCAGGCGTTCCGGTGCGGCAGCAACCTCTACCAGCACGCCAAGGTGCACGCCAACGCGCGGCCGTTCCAGTGCCAAGCGTGCGGCAAGCAGTTCCAGCGCAAGGGCGCACTCAACGTGCACATGCGCATCCACACGGGCGAGCGGCCCTACCCGTGCGACCACTGCGGCCGCACGTTCGTGCAGAAGAACGACATGCTGAAGCACCGCCGGACCCACCTCAAGGTCGCCGGCGGGGAGACCCGCCCCCGCGCCGCGCGGAGGGCCAAGGTCGACGCGACCCCGAGCGTGGACGATCCTGCCGCTGTCGCCGTCGTCTCCCCCGCGACCGTCGCACAGCCCCTGCTCATCACGCACGAGTTGATGGAGGAGTGCGCCATCAGCATGCCCATCGGCGAGAACACGCACTCACTCATTTTGCAGACGTACTAG
Protein Sequence: MKNDTVLEDSCVTLKNDMNDMVSGGKYQVSKVVDVCVESMDPGQDSKTTFRMELCRDVEKDGSQSGTEGGEEEKDPVVWKCKICGHVADGVSGLLDHGQAEHCSVRRGCRSCSAVFDGPAAQSDHECGRGRDAGGRLPAKFVCDACDKGFRLKKALREHLLRAHCAESPFKCGVCRKTYGSHAGLDIHAATHSSETPYLCDECGKSFKHITNLRGHKRSHLAAGLKNTHACRLCGAGFRSRFHLSEHLNVHEGRKPYACQDCGKGFSRKIQLRQHRFSHSAARPFKCHLCSACFNRSGNLTQHVKRHFKENKFTCKVCNSAFSTMGEVVTHRRTHTQEEVERSIVNSVDVPSLAEKHKCKTTPGDRRQSCGSTSSTRGGASRRRPNQRHRRRTCGKMLARKESLVSHMRMHSGEKMFECKICGKKLSNKGSLNYHLRSFHTGERPYACQFCGDCFVSKESRVVHERTHTGEKPYKCQVRPASCLRYWISRENVFVRKGVWKVCDQAFRCGSNLYQHAKVHANARPFQCQACGKQFQRKGALNVHMRIHTGERPYPCDHCGRTFVQKNDMLKHRRTHLKVAGGETRPRAARRAKVDATPSVDDPAAVAVVSPATVAQPLLITHELMEECAISMPIGENTHSLILQTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -