Basic Information

Insect: Bacillus rossius
Gene Symbol: -
Assembly: GCA_032445375.1
Location: CM063643.1:58256581-58266660[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00047 0.13 15.2 2.7 1 23 39 61 39 61 0.98

2 18 2.5e-06 0.00067 22.4 0.5 1 23 67 89 67 89 0.99

3 18 0.2 55 6.9 3.7 1 23 95 118 95 118 0.95

4 18 0.00071 0.19 14.7 0.5 1 23 125 147 125 147 0.98

5 18 0.012 3.3 10.8 3.2 3 23 154 174 153 175 0.91

6 18 4.7e-05 0.013 18.4 1.1 1 23 186 209 186 209 0.97

7 18 0.0012 0.32 14.0 0.7 1 20 215 234 215 237 0.95

8 18 0.00056 0.15 15.0 1.8 5 23 245 263 235 263 0.90

9 18 9.3e-05 0.025 17.5 0.0 1 20 269 288 269 290 0.94

10 18 0.00047 0.13 15.2 2.7 1 23 306 328 306 328 0.98

11 18 2.5e-06 0.00068 22.4 0.2 1 23 334 356 334 356 0.99

12 18 0.15 41 7.3 4.3 1 23 362 385 362 385 0.95

13 18 0.00038 0.1 15.5 0.2 1 23 392 414 392 414 0.98

14 18 0.012 3.3 10.8 3.2 3 23 421 441 420 442 0.91

15 18 0.00041 0.11 15.4 1.8 1 23 453 476 453 476 0.97

16 18 3.9e-05 0.01 18.7 0.2 1 23 482 504 482 504 0.97

17 18 0.0025 0.69 12.9 0.8 5 23 512 530 511 530 0.97

18 18 9.3e-05 0.025 17.5 0.0 1 20 536 555 536 557 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00047	0.13	15.2	2.7	1	23	39	61	39	61	0.98
2	18	2.5e-06	0.00067	22.4	0.5	1	23	67	89	67	89	0.99
3	18	0.2	55	6.9	3.7	1	23	95	118	95	118	0.95
4	18	0.00071	0.19	14.7	0.5	1	23	125	147	125	147	0.98
5	18	0.012	3.3	10.8	3.2	3	23	154	174	153	175	0.91
6	18	4.7e-05	0.013	18.4	1.1	1	23	186	209	186	209	0.97
7	18	0.0012	0.32	14.0	0.7	1	20	215	234	215	237	0.95
8	18	0.00056	0.15	15.0	1.8	5	23	245	263	235	263	0.90
9	18	9.3e-05	0.025	17.5	0.0	1	20	269	288	269	290	0.94
10	18	0.00047	0.13	15.2	2.7	1	23	306	328	306	328	0.98
11	18	2.5e-06	0.00068	22.4	0.2	1	23	334	356	334	356	0.99
12	18	0.15	41	7.3	4.3	1	23	362	385	362	385	0.95
13	18	0.00038	0.1	15.5	0.2	1	23	392	414	392	414	0.98
14	18	0.012	3.3	10.8	3.2	3	23	421	441	420	442	0.91
15	18	0.00041	0.11	15.4	1.8	1	23	453	476	453	476	0.97
16	18	3.9e-05	0.01	18.7	0.2	1	23	482	504	482	504	0.97
17	18	0.0025	0.69	12.9	0.8	5	23	512	530	511	530	0.97
18	18	9.3e-05	0.025	17.5	0.0	1	20	536	555	536	557	0.94

Sequence Information

Coding Sequence: ATGCACACAAAGGAGGCTGGGAAGGGGAACACAGTGGTAGAAGGAAAGAAAACAAGTGAGCTTGCGTGTGCCGACGACGCAGGAAACCAGTTCCTACAGGAGGTGTTGGACGTGTATGTATGTAGCTTCTGCGGCCGCAGGTTTGCACGATACTGTAGGCTGAGACAGCATTTGATCATCCATAGCCGTGAGAGAAATTTCAAGTGTGATAAATGTGGAGCTGCATTCAAAGTAAACTCCACCCTCCAGAGTCACCTTCTGACACACAGCATGGACAAACCCTTCAAGTGTGACAAGTGTCCTTCCACCCAGTGTACGCAAAGTGCTCTTCTGAGACACAAACAAAACAGGCACGGTGTAGGTGCTGATGGCTATGTCTGCTACATTTGTGGTGAAATGTTGAAGACAAGTAATGGTCTGGAGTATCACATCCAACACCACACGGGCAAGAATGTTTTGTGCGTAGCTTGTGGCAAGTTGTTCTACACAGTATCACATCTCAAAAAGCACACGGCCAGGCATCATGACCCCACGCCCAAGGAGCCGGGTGAGAATTTCGAGTGCTTGCACTGCTCCCGCAAGTATGCCACTAAAGCCTCCCTTAGAAACCACATTATGATAGTCCACCTCAAGGAGATGCCCTACGAGTGTGAGGAGTGTGGACTTAAGTTTACATTGAGATACAGGCTGAACAGGCACGTTGCCTGTCACAAGCAGAGGAAGTTCTGGTGCGACTGCAACCAGAGTTTCGTGACCAAGGACGGTCTGAACAGACACAAGATGACGCACGTCAACTTCAGACCGTACGTGTGTGACATGTGCGGGCTGACGTTCACGCAGAAGGGCTCGGTGTTGAGGCACATAGTGACGAGCATGAGGGGAAGAAACCAGTTCCTACAGGAGGTGTTGGACGTGTACGTATGTAGCTTCTGCGGCCGCAGGTTTGCACGATACTGTAGGCTGAGACAGCATTTGATCATCCATAGCCGCGAGAGAAATTTCAAGTGTGATAAATGTGGAGCTGCATTCAAAGTAAACTCTGCCCTCCAGAGTCACCTTCTGACACACAGCATGGACAAACCCTTCAAGTGTGACAAGTGTCCTTCCACCCAGTGTACGCGTAGCGCTCTTCAGAGACACAAACAAAACAGGCACGGTGTAGGTGCTGATGGCTATATCTGTTACATTTGTGGTGAAATGTTGAAGACAAGCAATGGTCTGGAGTATCACATCCAACGCCACACGGGCAAGAATGTTTTGTGCGTAGCTTGTGGCAAGTTGTTCTACACAGTATCACATCTCAAAAAGCACACGGCCAGGCATCATGACCTCACGCCCAAGGAGCCCAGCGAGAATTTCGAGTGCTTGCACTGCTCCCACAAGTACGCCACTAAAGCCGCCCTTAGAAACCACATTATGATAGAGCACCTCAAGGAGATGCCCTACGAGTGTGAGGAGTGTGGACTTAAGTTTGCATTGAAATATATGCTGAACAGACACGTTGCCAGTCACAAGGAGAGGAAGTTCTGGTGCGACTGCAACCAGAGTTTCGTGACCAAGGGCGGTCTATACAGACACAAGATGACGCACGTCAACTTCAGACCGTACGTGTGTGACATGTGCGGGCTGACGTTCACGCAGAAGGGCTCGGTGTTGAGGCACATAGTGACGAGCATGAGGGGAAGGTACTTCAAGAGAACTGTGACGAGCGCGGCCAAGGCAGCGAGGACATCACGGAACAAGTACAGACAGCAAGCGAGTGCTCCACGTGCTGTGAGGACTTATTTGCACAGCCCTATGTTCTAG
Protein Sequence: MHTKEAGKGNTVVEGKKTSELACADDAGNQFLQEVLDVYVCSFCGRRFARYCRLRQHLIIHSRERNFKCDKCGAAFKVNSTLQSHLLTHSMDKPFKCDKCPSTQCTQSALLRHKQNRHGVGADGYVCYICGEMLKTSNGLEYHIQHHTGKNVLCVACGKLFYTVSHLKKHTARHHDPTPKEPGENFECLHCSRKYATKASLRNHIMIVHLKEMPYECEECGLKFTLRYRLNRHVACHKQRKFWCDCNQSFVTKDGLNRHKMTHVNFRPYVCDMCGLTFTQKGSVLRHIVTSMRGRNQFLQEVLDVYVCSFCGRRFARYCRLRQHLIIHSRERNFKCDKCGAAFKVNSALQSHLLTHSMDKPFKCDKCPSTQCTRSALQRHKQNRHGVGADGYICYICGEMLKTSNGLEYHIQRHTGKNVLCVACGKLFYTVSHLKKHTARHHDLTPKEPSENFECLHCSHKYATKAALRNHIMIEHLKEMPYECEECGLKFALKYMLNRHVASHKERKFWCDCNQSFVTKGGLYRHKMTHVNFRPYVCDMCGLTFTQKGSVLRHIVTSMRGRYFKRTVTSAAKAARTSRNKYRQQASAPRAVRTYLHSPMF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -