Basic Information

Insect: Bacillus rossius
Gene Symbol: -
Assembly: GCA_032445375.1
Location: CM063640.1:364009700-364023516[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 1.1e-06 0.0003 23.5 0.1 1 23 76 98 76 98 0.97

2 11 0.017 4.6 10.3 0.0 1 17 104 120 104 121 0.93

3 11 5.8e-07 0.00016 24.4 0.7 1 23 204 226 204 226 0.99

4 11 1.1e-06 0.00029 23.6 0.8 1 23 232 254 232 254 0.98

5 11 1.8e-05 0.0049 19.7 0.6 1 23 260 282 260 282 0.98

6 11 9.4e-08 2.6e-05 26.9 0.4 1 23 288 310 288 310 0.99

7 11 1.7e-07 4.6e-05 26.1 0.2 1 23 316 338 316 338 0.98

8 11 8.6e-06 0.0023 20.7 0.1 1 23 344 366 344 366 0.97

9 11 6.6e-07 0.00018 24.2 0.1 1 23 372 394 372 394 0.98

10 11 2.9e-06 0.00078 22.2 0.6 1 23 400 422 400 422 0.98

11 11 6.3e-07 0.00017 24.3 0.7 1 23 428 450 428 450 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	1.1e-06	0.0003	23.5	0.1	1	23	76	98	76	98	0.97
2	11	0.017	4.6	10.3	0.0	1	17	104	120	104	121	0.93
3	11	5.8e-07	0.00016	24.4	0.7	1	23	204	226	204	226	0.99
4	11	1.1e-06	0.00029	23.6	0.8	1	23	232	254	232	254	0.98
5	11	1.8e-05	0.0049	19.7	0.6	1	23	260	282	260	282	0.98
6	11	9.4e-08	2.6e-05	26.9	0.4	1	23	288	310	288	310	0.99
7	11	1.7e-07	4.6e-05	26.1	0.2	1	23	316	338	316	338	0.98
8	11	8.6e-06	0.0023	20.7	0.1	1	23	344	366	344	366	0.97
9	11	6.6e-07	0.00018	24.2	0.1	1	23	372	394	372	394	0.98
10	11	2.9e-06	0.00078	22.2	0.6	1	23	400	422	400	422	0.98
11	11	6.3e-07	0.00017	24.3	0.7	1	23	428	450	428	450	0.96

Sequence Information

Coding Sequence: ATGCTTCCAGGAACCATGACCGAGGCAAGACCATGCCCCTTCCCTCGTCAACCCCTCCTCTCCTTTAGGAACAAGCCACGCCTATGCTTGCGCTCCACGCACGAGGCTTATCAGCTCCAGCACGTGCGTGTTCCTGCAGACAAGAAGtacgcggcggcggcggctggcGCGGGCGAGACGCGGCCGTGCGGGACGTGCAAGCCGCCGGCGAACGCGGCGCGGCCCTACGCGTGCCCGGAGTGCGGCCGTGCCTTCGCCCAGCTGCACTCTCTGCAGGCGCACGTGCGCGGCCACGGCGCGGAGCGGCCCTACGCCTGCGACGTGTGTCGCAAGGGCTTCACGCAGCTCAGCGCCCTGCAGGTGCCCGCCCCCTCCTCCCTCGTGCCGGGACCACGGCAGCGCGGAAGCTTGACGCGAACACGCAACCTCGGTCCCATGTTTGCTCGACACTTCCACACTGTTCCCTCTGACAACCTCTCGTGCCTTGTGCACGGCCCGTCGGTCAGCGTAGGCGGGTGTCCTAGTGCCCTCCCCCACCGCCTGATCCTCGTCATGTCCCCAGCGAACTCGCTGACGGGCTCTCGCATGACTCACTCTGGCGAGAAGCCGTACTCCTGCGAGCAGTGTGGCAAACGGTTCACGCAGGTCAGCGCTCTGCAGGTACACTCGCGAACCCACAGCGGGGAGAAGCCCTACTCCTGCAGCGAGTGCGACAAGAAGTTCTCTCAGATCAGTGCGCTCCAGGTTCACAACCGGACTCACACGGGTGAGAAGCCCTTCACGTGCTTGTTGTGCAACAAGCGCTTCTCGCAGGTGAGCGCGCTGCAGGTCCACAGCCGCATACACACGGGCGAGAAGCCCTACACCTGCGGCGAGTGCGGCAAGAAGTTCACCCAGATCAGCGCCCTCAATGCGCACACCCGCACACACACGGGCGACCGGCCGTACGCCTGCGAGATCTGCGGCCGCCGCTTCTCGCAGGTGGGCTCGCTGCAGAGGCACGTGCGCACGCACACGGGCGAGAAGCCGTACGCCTGCCGGGCGTGCGACAAGGCCTTCGCGCAGCTGAGCGCGCTGCAGGCCCACACCCGCACGCACACCGGCGACCGGCCATACGCCTGCACGCAGTGCGACAAGGCCTTCGCGCAGCTGAGCGCGCTGCAGGCGCACGCCCGGACGCACTCGGGCCTGAAGCCGTACGCCTGCTCGCAGTGCGACAAGAAGTTTGCGCAGATGAGCTCGCTGCAGATCCACACGCGCATCCACACGGGGTACCGGCCGCACGCGTGCGCACGCTGCGGCAAGGCGTTCACCCAGCTGAGCGCCTTGCAGGTGCACCAGCGCACGCACGGCTCTCCCGGGGCCCTGGAGAAGCAGGCTGATACCCCGGAGCTGTACCCTTCGGCGGGCGACTCCGAGGACAAGCCCGCTGCGTTCGGCCCCACCGCCACCGTGGCGATACACGCCGCGAACAGCATGTACAATGTATCAGATGAAGGGAGGAATGTTTATACACCTGCATAG
Protein Sequence: MLPGTMTEARPCPFPRQPLLSFRNKPRLCLRSTHEAYQLQHVRVPADKKYAAAAAGAGETRPCGTCKPPANAARPYACPECGRAFAQLHSLQAHVRGHGAERPYACDVCRKGFTQLSALQVPAPSSLVPGPRQRGSLTRTRNLGPMFARHFHTVPSDNLSCLVHGPSVSVGGCPSALPHRLILVMSPANSLTGSRMTHSGEKPYSCEQCGKRFTQVSALQVHSRTHSGEKPYSCSECDKKFSQISALQVHNRTHTGEKPFTCLLCNKRFSQVSALQVHSRIHTGEKPYTCGECGKKFTQISALNAHTRTHTGDRPYACEICGRRFSQVGSLQRHVRTHTGEKPYACRACDKAFAQLSALQAHTRTHTGDRPYACTQCDKAFAQLSALQAHARTHSGLKPYACSQCDKKFAQMSSLQIHTRIHTGYRPHACARCGKAFTQLSALQVHQRTHGSPGALEKQADTPELYPSAGDSEDKPAAFGPTATVAIHAANSMYNVSDEGRNVYTPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -