Bros100345.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bacillus rossius
Gene Symbol
-
Assembly
GCA_032445375.1
Location
JASMSR010000011.1:14095902-14133567[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 41 0.053 14 8.8 0.2 6 23 2 20 1 20 0.95
2 41 0.00059 0.16 14.9 5.8 1 23 24 46 24 46 0.97
3 41 0.14 38 7.4 1.1 1 23 51 73 51 73 0.96
4 41 0.001 0.28 14.2 5.1 1 23 78 100 78 100 0.98
5 41 0.00036 0.097 15.6 1.8 1 23 106 128 106 128 0.97
6 41 0.0031 0.83 12.7 0.1 1 23 134 156 134 156 0.93
7 41 0.17 45 7.2 0.8 1 23 166 188 166 188 0.95
8 41 1.9e-06 0.00052 22.8 0.6 1 23 195 217 195 217 0.98
9 41 9.8e-07 0.00027 23.7 1.6 2 23 224 245 223 245 0.97
10 41 0.00011 0.03 17.2 3.0 1 23 273 295 273 295 0.98
11 41 0.0056 1.5 11.9 3.6 1 23 301 323 301 323 0.95
12 41 0.0018 0.48 13.4 3.3 1 23 329 351 329 351 0.99
13 41 0.00057 0.15 15.0 0.4 2 23 358 379 357 379 0.95
14 41 4e-05 0.011 18.6 0.8 1 23 385 407 385 407 0.95
15 41 2.9e-06 0.00078 22.2 1.4 1 23 417 439 417 439 0.98
16 41 8.9e-06 0.0024 20.7 0.8 1 23 446 468 446 468 0.99
17 41 4.4e-06 0.0012 21.6 0.6 1 23 474 496 474 496 0.98
18 41 0.00012 0.033 17.1 4.1 1 23 543 565 543 565 0.97
19 41 0.00022 0.06 16.3 2.0 1 23 571 593 571 593 0.94
20 41 0.00099 0.27 14.2 3.4 2 23 600 621 599 622 0.94
21 41 0.006 1.6 11.7 3.9 1 23 626 648 626 648 0.98
22 41 0.37 1e+02 6.1 0.2 1 23 658 680 658 680 0.94
23 41 2.3e-05 0.0061 19.4 0.0 1 23 685 707 685 707 0.98
24 41 0.0039 1.1 12.3 0.2 2 23 714 735 713 735 0.91
25 41 0.00019 0.052 16.5 0.8 1 21 741 761 741 763 0.95
26 41 2.1 5.8e+02 3.7 0.3 1 14 769 782 769 783 0.89
27 41 0.0002 0.054 16.4 2.5 1 23 805 827 805 827 0.98
28 41 0.00032 0.086 15.8 4.1 2 23 837 858 837 858 0.98
29 41 0.0005 0.14 15.1 0.2 3 23 865 885 864 885 0.98
30 41 0.00013 0.034 17.0 0.2 1 23 891 913 891 913 0.98
31 41 0.00017 0.046 16.6 3.7 1 21 919 939 919 941 0.93
32 41 0.00021 0.057 16.3 2.2 1 23 970 992 970 992 0.97
33 41 1.3e-05 0.0035 20.2 1.6 1 23 998 1020 998 1020 0.98
34 41 0.0002 0.054 16.4 1.2 1 23 1026 1048 1026 1048 0.97
35 41 1.5e-05 0.0041 19.9 1.1 1 23 1054 1076 1054 1076 0.98
36 41 0.00069 0.19 14.7 1.4 1 23 1082 1104 1082 1104 0.98
37 41 0.0044 1.2 12.2 4.7 1 23 1114 1136 1114 1136 0.98
38 41 0.00091 0.25 14.3 0.0 2 23 1143 1164 1142 1164 0.97
39 41 4.9e-07 0.00013 24.6 0.7 1 23 1170 1192 1170 1192 0.98
40 41 1.2e-05 0.0034 20.2 1.3 1 23 1198 1220 1198 1220 0.96
41 41 9.6e-06 0.0026 20.6 0.8 1 23 1226 1248 1226 1248 0.99

Sequence Information

Coding Sequence
ATGTGCAGCAAGAAGTTTGTCCGAGAGGCGAAACTACAAGATCACGTGAAGAAGATTCATTGCACTCCTCACAAATGCCCGTTATGTGACAAGACCTTCAAACAGAGGCACCAGTTAGACTACCATAAGGTCACTCACAGGAACAAGGGACACGTTTGCAACATCTGTGGCTATGCTAGCTATTTCAAGGGCGTGATGGAGCGGCACAAGAAGTTGCACTTGGCTTACAAGTACTCGTGTGACCTGTGCAACCACGTGTGCAACCGCAAGGGGAACTTGGAGTCCCATCGGAAGAGACACCTGGGGGAGTACGATCACGTGTGCGACGTGTGCGGCAAGGGGTTCCACACGAACTTCGCCCTGCAGGGCCACAAGAGGGTGCACGCGGGGCAGAAGCCGTTCTTGTGCGACCTCTGCGGCGAGGGCTTCGCGTACAAGTCGGCGATGGCGAAGCACCGGCTGGGGCACGACCCGGCGGGGACGGCGCGGCGGCGGCACGAGTGCGGGCTCTGCGGGGCGAGCTTCGCCTGCAAGCGCAGCCTGCTGGCACACGTGGGGCGCCACACGGGCGAGCTCCCCCGGTTCGTGTGCCACCTGTGCGGCAAGGCGGTGTCCACGGCCGACTCCCTCAGGACGCACCTGCGCATGCACTCCGGCGAGAAGCCCCTGCCCTGCGACGTGTGCGGCAAGCCCTTCAGCCACAAGAAGTACTTGAGAGTCCACAGGCGCACCCACACCGGCGAGAAACCTTACGAGTGCGACGTCTGCGGCAGACTGGTTCTCGTCGAAGAGTTTCCTGATAAAAGTGACGTGAGACACACGTGTGACACGTGCAGCAAGGAGTATAGGTCTGCGGACTCGTTGCGTCGGCACGTCAAGCGACACAGCGAGGAACGGCCACACGCTTGTGGCTCCTGCGGCAAGCGGTTCAAATGCAGGAGCGAACTGAAAGCTCACCAAAGTGTCCACAATGGGAACTTCACTTTCAAATGCGATTTTTGCGAGTACACCACCAATCGGAAAACAAATTTGGTGCTGCATCGCAAACGCCACCTGAACGAGTTTACAATGAAGTGCGACGTGTGCGAGAAAGGGTTTTACACGAAGAAAGACTTGAGGGATCACGGCAGCGTTCACACTGGCTTGAAGCCATTTCTCTGTGACATTTGCGGGTGGAGCTTCACCAACTATTACTCACTGTCGCAGCACAAGTTACGACACGACCCGGATTATAAACCTAATTACAGGTACAGCTGCAATACGTGTGGCAAGGCATTTGTGTCGCGCAAGAATCTCAGCACTCACGTGAAACGACACATCGGAGTGTGTCCAGAATATGTATGTGATTTTTGCGGGAAAATCGTATCGAGTCGAGAATCGCTGAAGACTCACAGACGGACACACACGGGTGAAAAGCCATTTATTTGTACGGCATGTGGCAAAGCTTTCAGCGACAGGAAGTACCTGAGTGTCCACCAGAGAACTCACACCGGGCAGTGTTCTGGGAGCCAAGCCATGGCGGTCGACTCGACAGAAAGTGGCATTGCACTGTGCCAGTTCAAGATGGAAGCAGGACGGTGGAGGGAGAGAGACTTTCGGCATCAAGAGCTTCACACGGACACAAAACACTCCTGCAAGATCTGCTCAAAACAGTTCAAGCTGCGTGCTTACCTCAGGAAACACATGGAGACTCACTCTGAAAGCAGAGATCACGCGTGCGACGTTTGCGGCTCGAGGTTCCGGAGGAAGTCGCAGCTGCAGCTCCATAGGGGCAGGCACTCGAAGGTGCTGGCGCTGATGTGCGAGAGGTGCGGGAAGAGGTTCCGCACGCACCCCGAGCTGAAGGGGCACGTCAACCGGCACCACACGGCCAAGCACGTGTGCCCCACGTGCGCACGCTCGTACCCTCACAGGCACGTGCTGGAGAGGCACGTGAGGCGGCACGGGACGCGGGCGCGGGCGGAGAAGCTGCACCAGTGCGAGGCGTGCGGCAAGATGCTGGGCTCCCGGTGGTCCCTGGACCTGCACCGGGGGATCCACGCCGGCCTGCGGTTCCCCTGCGAGCTGTGCGGCAAGGCGATGACCACCCGCTGGAACCTGGCCGCCCACATGAGGGTGCACACGGGCGAGAAGCCCTTGGTCTGCGACACGTGCGGCAAGGCGTTCGCCAGCCTCGGCAACATGATCGTGCACTGCCGCGCGCACACGGGCGAGCGGCCGTACGAGTGCGACCTCTGCGACAAGGCGTTCGCCAAGAGCTCGGGTCTCGTCGCCCACAGACGCTGCCACACCGGCGAGAAGCCCTTCGTCTGTGCCGCCTGCGGGGAGTCCTTCTATCGGAAAGTGCACAAGGGGTTTCTCACTGCGTTCCAGTACGAGGAACACAAGAACTTCCACACTGGGGAGAAACCTCACAAGTGCAAGGTGTGCGGCAAGGCTTACGCCGTGGGCTCCAGCTTGCACTATCACATGCGCTCGCACGGGGAGGAAGCAAATCGGGAGAACAACCGGTGCGCAACGTGCAGCAAATGTTTTGCGAACCAGCGGACGCTGAAGATCCACTTGAAGACGCATTCGGACAAGAAGAACCTGTGCGAGCTCTGCGGAAAGGCGCTGTCCGGGCGTGAATCCCTCAGGACCCACCTCCGCATGCACGCGGGCGAAAAGCCTTTCGTGTGCGACGTGTGCGGCAAGGCCTTCGTTTCGCGGACGTTGATAAAAACGCACTCTCGAATCCACACGGGGGAGAAACCGTATCTGTGCACGGTGTGCAACAAGAGGTTTTCGCAACGCTCCACTCTCACCGTCCACTTGAGATGCCACACGGGGGACCGCCCCTATCGCTGTGCAGGCTTATCAGTGCAGAGTGAGCATCAGGATCGTGAGTGGGAGTTGCCCTACGACGATTTCAATTGCAACGTGTGCGGGAAAGTGTGCTTGACGAAGAGCCAGTTGAAAAACCACATGGTGTCGCACACGGACGCCCGGCCTTTCAAATGCGACGTCTGCAGCCGTACGTACAAGCGGGCTTTCGAATTGAAGAAGCATTTGGCTACCCACACGGGCGAGATGGAGCACATCTGCGACATCTGCGGCTACGCCACTTTCCAGAAGTCCAACCTGGTGGTGCACCGGAAGAGGCACCTGAACGACTACAAGTTCAAGTGCACGGTCTGCCGGAAGGGCTACTACACCAACACGGAGCTCCAGCGGCACATGATCGTGCACATGGAGCAGAACCCGTTCCAGTGCGACATCTGCGGCCGGGCCTACCTCTACAAGAGCAACctgtccatgcacaagaagaagcATGAGCCCAACTACCGCGAGGTGTTCAACTTCCAGTGCGAGTTCTGCGGCAAGCGGTTCTTGCACAACAACTCGCTCCGCATCCACCGGAAGTACCACCTGGGGGAGAACCAGCTGGTGTGCGACATCTGCGGCAAGACCCTGTCGGGCGGGGAGGCCCTGAAGGCGCACCGGCGCATCCACACGGGCGAGAAGCCGTACGCCTGCGACGTGTGCGGGAAGCGGTTCAGCAAGCAGGACTACCTGAAGGTGCACCGGCGGGTGCACACGGGGGAGAAGCCCCACGCCTGCAGCGAATGTGGCAAGGCCTTCTCGCAGTTGTCCACTCTGATGATGCACAAGCGGCTCCACACGGGCGTCAAGCCCTACCGCTGCGAGTCCTGCCCCAAGGCTTTCGTTTCCAAGACGCTTCTGAAGAGTCACCAGAAGGTGCATCCAACTTAA
Protein Sequence
MCSKKFVREAKLQDHVKKIHCTPHKCPLCDKTFKQRHQLDYHKVTHRNKGHVCNICGYASYFKGVMERHKKLHLAYKYSCDLCNHVCNRKGNLESHRKRHLGEYDHVCDVCGKGFHTNFALQGHKRVHAGQKPFLCDLCGEGFAYKSAMAKHRLGHDPAGTARRRHECGLCGASFACKRSLLAHVGRHTGELPRFVCHLCGKAVSTADSLRTHLRMHSGEKPLPCDVCGKPFSHKKYLRVHRRTHTGEKPYECDVCGRLVLVEEFPDKSDVRHTCDTCSKEYRSADSLRRHVKRHSEERPHACGSCGKRFKCRSELKAHQSVHNGNFTFKCDFCEYTTNRKTNLVLHRKRHLNEFTMKCDVCEKGFYTKKDLRDHGSVHTGLKPFLCDICGWSFTNYYSLSQHKLRHDPDYKPNYRYSCNTCGKAFVSRKNLSTHVKRHIGVCPEYVCDFCGKIVSSRESLKTHRRTHTGEKPFICTACGKAFSDRKYLSVHQRTHTGQCSGSQAMAVDSTESGIALCQFKMEAGRWRERDFRHQELHTDTKHSCKICSKQFKLRAYLRKHMETHSESRDHACDVCGSRFRRKSQLQLHRGRHSKVLALMCERCGKRFRTHPELKGHVNRHHTAKHVCPTCARSYPHRHVLERHVRRHGTRARAEKLHQCEACGKMLGSRWSLDLHRGIHAGLRFPCELCGKAMTTRWNLAAHMRVHTGEKPLVCDTCGKAFASLGNMIVHCRAHTGERPYECDLCDKAFAKSSGLVAHRRCHTGEKPFVCAACGESFYRKVHKGFLTAFQYEEHKNFHTGEKPHKCKVCGKAYAVGSSLHYHMRSHGEEANRENNRCATCSKCFANQRTLKIHLKTHSDKKNLCELCGKALSGRESLRTHLRMHAGEKPFVCDVCGKAFVSRTLIKTHSRIHTGEKPYLCTVCNKRFSQRSTLTVHLRCHTGDRPYRCAGLSVQSEHQDREWELPYDDFNCNVCGKVCLTKSQLKNHMVSHTDARPFKCDVCSRTYKRAFELKKHLATHTGEMEHICDICGYATFQKSNLVVHRKRHLNDYKFKCTVCRKGYYTNTELQRHMIVHMEQNPFQCDICGRAYLYKSNLSMHKKKHEPNYREVFNFQCEFCGKRFLHNNSLRIHRKYHLGENQLVCDICGKTLSGGEALKAHRRIHTGEKPYACDVCGKRFSKQDYLKVHRRVHTGEKPHACSECGKAFSQLSTLMMHKRLHTGVKPYRCESCPKAFVSKTLLKSHQKVHPT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-