Bros088448.1
Basic Information
- Insect
- Bacillus rossius
- Gene Symbol
- Tbx20
- Assembly
- GCA_032445375.1
- Location
- CM063654.1:20548420-20550948[-]
Transcription Factor Domain
- TF Family
- T-box
- Domain
- T-box domain
- PFAM
- PF00907
- TF Group
- Unclassified Structure
- Description
- The T-box encodes a 180 amino acid domain that binds to DNA. Genes encoding T-box proteins are found in a wide range of animals, but not in other kingdoms such as plants. Family members are all thought to bind to the DNA consensus sequence TCACACCT. they are found exclusively in the nucleus, and perform DNA-binding and transcriptional activation/repression roles. They are generally required for development of the specific tissues they are expressed in, and mutations in T-box genes are implicated in human conditions such as DiGeorge syndrome and X-linked cleft palate, which feature malformations [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.44 3e+03 0.4 0.0 28 41 1 14 1 16 0.91 2 10 0.00068 4.5 9.6 0.0 26 51 17 42 12 49 0.91 3 10 0.0005 3.4 10.0 0.0 26 52 101 127 97 136 0.89 4 10 3.5e-06 0.023 17.1 0.0 26 52 185 211 181 217 0.93 5 10 2.5e-08 0.00017 24.0 0.0 26 53 269 296 265 299 0.93 6 10 1.3e-07 0.00088 21.7 0.0 26 53 353 380 349 383 0.93 7 10 0.0012 7.7 8.8 0.0 26 43 437 454 433 455 0.89 8 10 4.5e-06 0.03 16.7 0.1 26 52 455 481 451 487 0.94 9 10 0.0012 7.7 8.8 0.0 26 43 539 556 535 557 0.89 10 10 1.9e-07 0.0013 21.1 0.0 26 53 557 584 555 586 0.95
Sequence Information
- Coding Sequence
- ATGTTCCCCACGTTTCGGGTGTCCTTCACAGGAGTGCGGCCCGGGCAGCGGCGCATGTTCCCCACGTGTCGGGAGTCCTTCACGGGAGTGCGGCCCGAGCTGCGGAACGCGGTGCTCATGGACACATGGCCGGGCACTTGTTCTCTGTTCACAGTGTCGCTGTCTAGTTCTTCACTCACATTATCGAGTGCGGTGTTGCAGGCGCATGTTCACCACGTGTCGGGTGTCCTTCACGGGAGTGCGGCCCGAGCAGCGTGTCGCTGCCTAGTTGTTCACTCACAGTATCGAGTGCGGTGTTGCAGGCGCATGTTCCCCACGTGTCGGGAGTCCTTCACGGGAGTGCGGCCCGAGCTGCGGAACGCGGTGCTCATGGACACATGGCCGGGCACTTGTTCTCAGTTCACAGTGTCGCTGCCTAGTTGTTCACTCACAGTGTCGAGTGCGGTGTTGCAGGCGAATGTTCCCCACGTGTCGGGTGTCCTTCACGGGAGTGCGGCCCGAGCAGCGTGTCGCTGCCTAGTTGTTCACTCACAGTGTCGAGTGCGGTGTTGCAGGCGAATGTTCACCACGTGTCGGGTGTCCTTCACGGGAGTGCGGCCCGAGCAGCGGTACGCGGTGCTCATGGACATAGTGCTGGGCACTTGTTCTCTGTTCACAGTGTCGCTGCCTAGTTCTTCACTCACAGTGTCGAGTGCGGTGTTGCAGGTGCATGTTCCCCACGTTTTCTTTGTCTTTCACAGGAGTGCGGCCCGGGCAGCGTGTCGCTGCCTAGTTGTTCACTCACAGTGTCGAGTGCGGTGTTGCAGGCGCATGTTCCCCACGTGTCGGGTGTCCTTCACGGGAGTGCGGCCCGAGCAGCGGTACGTGGTGCTCATGGACATAGTGCCGGGCACTTGTCCTCTGTTCACAGTGTCGCTGCCTAGTTGTTCACTCACAGTGGTGAGTGCGGTGTTGCAGGCGCATGTTCCCCACGTGTCGGGTGTCCTTCACGGGAGTGCGGTCCGAGCAGCGTGTCGCTGCCTAGTGGTTCACTCACAGTGTCGAGTGCGGTGTTGCAGGCGCATGTTCCCCACGTGTCGGGTGTCCTTCACGGGAGTGCGGCCCGAGCAGCGGTACGCGGTGCTCATGGACACAGTGCCGGGCATTTGTTCTCTGTTCACAGTGTCGCTGCCTAGTTGTTCACTCACAGTGTCGAGTGCGGTGTTGCAGGCGCATGTTCCCCACGTGTCGGGTGTCCTTCACGGGAGTGCGGCCCGAGCAGCGTGTCGCTGCCTAGTTGTTCACTCACAGTGTCGAGTGCGGTGTTGCAGGCGCATGTTCCCCACGTGTCGGGTGTCCTTCACGGGAGTGCGGCCCGAGCAGCGGCGCATGTTCACCACGTGTCGGGTGTCCTTCACGGGAGTGCGGCCCGAGCAGCGGTACGCGGTGCTCATGGACATAGTGCTGGGCACTTGTTCTCTGTTCACAGTGTCGCTGCCTAGTTCTTCTCTCACAGTGTCGAGTGCGGTGTTGCAGGTGCATGTTCCCCACGTTTTCTTTGTCTTTCACAGGAGTGCGGCCCGGGCAGCGTGTCGCTGCCTAGTTGTTCACTCACAGTGTCGAGTGCGGTGTTGCAGGCGCATGTTCCCCACGTGTCGGGTGTCCTTCACGGGAGTGCGGCCCGAGCAGCGGCGCATGTTCCCCACGTGTCGGGTGTCCTTCACGGGAGTGCGGCCCGAGCAGCGGTACGCGGTGCTCATGGACACAGTGCCGGGCATTTGTTCTCTGTTCACAGTGTCGCTGCCTAGTTGTTCACTCACAGTGTCGAGTGCGGTGTTGCAGGCGCATGTTCCCCACGTGTCGGGTGTCCTTCACGGGAGTGCGGCCCGAGCAGCGGTACGCGGTGCTCATGGACACAGTGCCGGGCATTTGTTCTCTGTTCACAGTGTCGCTGCCTAG
- Protein Sequence
- MFPTFRVSFTGVRPGQRRMFPTCRESFTGVRPELRNAVLMDTWPGTCSLFTVSLSSSSLTLSSAVLQAHVHHVSGVLHGSAARAACRCLVVHSQYRVRCCRRMFPTCRESFTGVRPELRNAVLMDTWPGTCSQFTVSLPSCSLTVSSAVLQANVPHVSGVLHGSAARAACRCLVVHSQCRVRCCRRMFTTCRVSFTGVRPEQRYAVLMDIVLGTCSLFTVSLPSSSLTVSSAVLQVHVPHVFFVFHRSAARAACRCLVVHSQCRVRCCRRMFPTCRVSFTGVRPEQRYVVLMDIVPGTCPLFTVSLPSCSLTVVSAVLQAHVPHVSGVLHGSAVRAACRCLVVHSQCRVRCCRRMFPTCRVSFTGVRPEQRYAVLMDTVPGICSLFTVSLPSCSLTVSSAVLQAHVPHVSGVLHGSAARAACRCLVVHSQCRVRCCRRMFPTCRVSFTGVRPEQRRMFTTCRVSFTGVRPEQRYAVLMDIVLGTCSLFTVSLPSSSLTVSSAVLQVHVPHVFFVFHRSAARAACRCLVVHSQCRVRCCRRMFPTCRVSFTGVRPEQRRMFPTCRVSFTGVRPEQRYAVLMDTVPGICSLFTVSLPSCSLTVSSAVLQAHVPHVSGVLHGSAARAAVRGAHGHSAGHLFSVHSVAA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -