Basic Information

Insect: Bacillus rossius
Gene Symbol: -
Assembly: GCA_032445375.1
Location: CM063646.1:37927646-37935169[-]

Transcription Factor Domain

TF Family: NF-YA
Domain: CBFB_NFYA domain
PFAM: PF02045
TF Group: Other Alpha-Helix Group
Description: Diverse DNA binding proteins are known to bind the CCAAT box, a common cis- acting element found in the promoter and enhancer regions of a large number of genes in eukaryotes. Amongst these proteins is one known as the CCAAT-binding factor (CBF) or nuclear transcription factor Y (NF-Y) [1]. CBF is a heteromeric transcription factor that consists of two different components both needed for DNA-binding. The HAP protein complex of yeast binds to the upstream activation site of cytochrome C iso-1 gene (CYC1) as well as other genes involved in mitochondrial electron transport and activates their expression. It also recognises the sequence CCAAT and is structurally and evolutionary related to CBF. The first subunit of CBF is known as CBF-A or NF-YB in vertebrates, and HAP3 in budding yeast. The second subunit is known as CBF-B or NF-YA in vertebrates and HAP2 in budding yeast. It is a protein of 265 to 350 amino-acid residues which contains a highly conserved region of about 60 residues. This region, called the 'essential core' [2], seems to consist of two subdomains: an N-terminal subunit-association domain and a C-terminal DNA recognition domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 1.3 4.5e+04 -2.4 0.1 28 50 10 32 5 35 0.71

2 20 0.32 1.1e+04 -0.5 0.0 34 52 86 104 63 106 0.73

3 20 0.44 1.6e+04 -0.9 0.0 35 52 128 145 107 146 0.79

4 20 0.22 7.9e+03 0.0 0.0 30 52 198 220 181 221 0.83

5 20 0.21 7.3e+03 0.1 0.0 30 51 273 294 263 317 0.77

6 20 0.4 1.4e+04 -0.8 0.0 36 52 399 415 382 417 0.74

7 20 0.3 1.1e+04 -0.4 0.0 32 52 437 457 418 458 0.78

8 20 0.23 8.2e+03 -0.0 0.0 30 52 485 507 475 508 0.80

9 20 0.12 4.3e+03 0.9 0.0 28 52 533 557 518 558 0.79

10 20 0.54 1.9e+04 -1.2 0.0 36 52 641 657 631 658 0.81

11 20 0.0061 2.2e+02 5.0 0.0 35 52 695 712 677 713 0.77

12 20 0.57 2e+04 -1.3 0.0 35 51 864 880 829 885 0.77

13 20 0.087 3.1e+03 1.3 0.6 36 50 940 954 877 982 0.67

14 20 0.27 9.4e+03 -0.2 0.0 30 52 1009 1031 1001 1034 0.80

15 20 0.35 1.2e+04 -0.6 0.0 35 52 1039 1056 1024 1057 0.74

16 20 0.17 6e+03 0.4 0.1 31 52 1124 1145 1086 1146 0.74

17 20 0.17 6e+03 0.4 0.1 30 50 1501 1521 1479 1524 0.52

18 20 0.006 2.1e+02 5.0 0.1 35 52 1632 1649 1620 1650 0.73

19 20 2.1 7.5e+04 -3.1 0.0 30 52 1683 1705 1676 1706 0.74

20 20 0.06 2.1e+03 1.8 0.0 32 52 1774 1794 1740 1795 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	1.3	4.5e+04	-2.4	0.1	28	50	10	32	5	35	0.71
2	20	0.32	1.1e+04	-0.5	0.0	34	52	86	104	63	106	0.73
3	20	0.44	1.6e+04	-0.9	0.0	35	52	128	145	107	146	0.79
4	20	0.22	7.9e+03	0.0	0.0	30	52	198	220	181	221	0.83
5	20	0.21	7.3e+03	0.1	0.0	30	51	273	294	263	317	0.77
6	20	0.4	1.4e+04	-0.8	0.0	36	52	399	415	382	417	0.74
7	20	0.3	1.1e+04	-0.4	0.0	32	52	437	457	418	458	0.78
8	20	0.23	8.2e+03	-0.0	0.0	30	52	485	507	475	508	0.80
9	20	0.12	4.3e+03	0.9	0.0	28	52	533	557	518	558	0.79
10	20	0.54	1.9e+04	-1.2	0.0	36	52	641	657	631	658	0.81
11	20	0.0061	2.2e+02	5.0	0.0	35	52	695	712	677	713	0.77
12	20	0.57	2e+04	-1.3	0.0	35	51	864	880	829	885	0.77
13	20	0.087	3.1e+03	1.3	0.6	36	50	940	954	877	982	0.67
14	20	0.27	9.4e+03	-0.2	0.0	30	52	1009	1031	1001	1034	0.80
15	20	0.35	1.2e+04	-0.6	0.0	35	52	1039	1056	1024	1057	0.74
16	20	0.17	6e+03	0.4	0.1	31	52	1124	1145	1086	1146	0.74
17	20	0.17	6e+03	0.4	0.1	30	50	1501	1521	1479	1524	0.52
18	20	0.006	2.1e+02	5.0	0.1	35	52	1632	1649	1620	1650	0.73
19	20	2.1	7.5e+04	-3.1	0.0	30	52	1683	1705	1676	1706	0.74
20	20	0.06	2.1e+03	1.8	0.0	32	52	1774	1794	1740	1795	0.82

Sequence Information

Coding Sequence: ATGGACACTGCTACGCGGAGTTATCGTCGCCAGCCTCGCCAGGAGGAGGAAGtggtggacaactcgcgactcctgtgggccaTGTGGATGACCCGATCGTCGCAGGAGCCTCGCCAGGATATGGAGGTGGTAGACAACttgcgactcctgtgggcgctgtggaggaccggGGCGATGCAGGagcctcgccaggaggtggaTGTTCTGGACAACTCGCGACTTCTGACCCGGGCAACGCAGGAAACTCGCCAGGAGGTGGATGGTGTGGACAACTCGCgtctcctgtgggcgctgtggaggacccgggcgacgcagGAGCCCCGCCAGGAGGTGGATGTGGTGGACAACTCgtcCCGGGCGACGCAGGTGCTTCGCCAGGTGGATGTGGTGGACAACTCGCgtctcctgtgggcgctgtggaggacgcGGGCAACGCAGGAGCCTCGCCAAGTGGTCGAGGTGGCGGaaaactcgcgactcctgtgggccaTGTGGATGAACCGATCGTCGCAGGAGCCTCGCCAGGAGATGGAGGTGGTAGACAACttgcgactcctgtgggcgctgtggaggaccggGGCGATGCAGGagcctcgccaggaggtggaTGTAGTGGACAATTCGCGACtgctgtgggcgctgtggaggacgcGGGCAACGCAGGAGCCTCGCCAAGTGGTCGAGGTGGCGGaaaactcgcgactcctgtgggcgctgtgcaGGACCGGGGCGATGCAGGAGCCTCGCCATTACGTGGATGTTGTGGACAACACGCgtctcctgtgggcgctgtggaggacccgggcgatgcaggagcctcgccaggaggtggaTGTGGTGGACAACTCGAGAAtactgtgggcgctgtggaggacccgggcgatgcaggagcctcgccaggaggtggaTGTGGTGGACAACTCGCGAATAaagtgggcgctgtggaggaccccaGCGACGCAGGAACCTCGTCAGGAGGTGGAtgtggcggacaactcgcgactcctgtgggcgctgtggaggacccagGCGATGCATGAGCTTCGCCAGGAGGTGTATGtggtggacaactcgcgactcctgtgggcgctgtggaggaccggGGCGATGCAGGAGCCTCGCCAGGAAGTGGATGTtgtggacaactcgcgactcctGACCCGGGCAACGCAGGATACTCGCCAGGAGGTGGATGGTGTGGACAACTCGCgtctcctgtgggcgctgtggaggacccgggcttCGCAGGAGCCCCGCCAGGAGGTGGATGTGGTGGACAACTCgtcCCGGGCGACGCAGGTGCTTCGCCAGGAGGTGGATGtggtggacaactcgcgactcctgtgggcgctgtggaggacgcGGGCAACGCAGGAGCCTCACCAAGTGGTCGAGGTGGTGGAacactcgcgactcctgtgggcgctgtggaggaccggGGCGATGCAGGagcctcgccaggaggtggaTGTTGTGGataactcgcgactcctgtgggcgctgtggaggacccgggcgacgcagGAGCCTCGCCAGGATGTGGATGTGGTGGACATCTCGCGaatcctgtgggcgctgtggaggacccgggcgatgcaggagcctcgccaggaggtgaatgtggtggacaactcgcgaatcctgtgggcgctgtggaggacccgggcgacgcagGAGCCTCGCCAGAAGGTGGAtgtggcggacaactcgcgactcctgtgggcgctgtggaggacccagGCGACGCAGGAGCTTCGCCAGGAGGTGGATGtggtggacaactcgcgactcctgtgggcgctgtggaggaccggTGCGATGAAGGagcctcgccaggaggtggatgtttgggacaactcgcgactcctgtgggcgctgtggaggacctgGGCGACGCAGGAGTTTCGCCAGGAGGTGGATGTGGTGGACAattcgcgactcctgtgggcgctgtggaggacccgggcgacgcaggagcctcgccaggaggagcctcgccaggaggtggaTGTGCCGGACGACttgcgactcctgtgggcgctgtggaggacccgggcgacgcagGAGCTTCGCCAGGTGGTGGATGTGGTGGAAAACTCGCGAcacctgtgggcgctgtggaggacgcGGACAACGCAGGAGCCTCGCCAAGTGGTCGAGATGGCgcacaactcgcgactcctACCCGGGCGACGCAGGAGCCTCGCCAGGAGGTTGATGTGGTGGACAACTCGCGAATCCTGGGGCATTGTGGAGGACCAGGGCGATGCAAAAGCTTCGCCAGGAGGTGGATGTAGTGGACAACTCTCGACTCCTGTGGGCGATGTGGAGGACCTGGGCGACGCAGGAGCCTCGCCAGGAGGTAGATGTGGTGGacactcgcgactcctgtggtcgTGGTGGAGGACCGGGGCGATGCAGGagcctcgccaggaggtggatgtagtggacaactcgcgactcctcaGGGCGCTGTGGTGGACCCGGGCGACGCAGGAGCCTCGCCAGGAGGTAGAGGTGGCGGACAagtcgcgactcctgtgggcgctgtggaggacccaaGCGACGCAGGAGCTTTGCCAGGAGGTGGATGtggtggacaactcgcgactcctgtgggcgctgtggaggacgcGGGCAATGCAGGagcctcgccaggaggtggaTGTGGTGGACAACTCGCGAATCCTGTgtgcgctgtggaggacccgggcgacgcaggagcctcgccaggaggtggaggtggcggacaattcgcgactcctgtgggcgctgtggaggagccgggcgacgcaggagcctcgccaggaggtggatgtggtggacaactcgcgaatcctgtgggcgctgtggaggacccgggcgacgcaggagcctcgccaggaggtggaggtggcggacaattcgcgactcctgtgggcgctgtggaggagcCGGGCGACGCAGGAGCCTCGTCAGGAGGTGGATGTGGTGGACAACTCGCGaatcctgtgggcgctgtggagtaCCCGGGTGACACAGGagcctcgccaggaggtggatgtggtggacaactcgcgaatcctgtgggcgctgtggaggacccgggcgacgcagGAGCCTCGCCAGGTGGTGGAGGTGGCaaacaactcgcgactcctgtgggcgctgtggaggagcCGGGCGACGCAGGAGCCTCTTCAGGAGGTAGATGTGGTGGACAACTCGCGAATCCTGTgcgcgctgtggaggacccgggcgacgcagGAGCTTCGCCAGGAGGTGAAGtggaggacccgggcgacgaTGGATCCTCGCCAGAaggtggaggtggcggacaactcgcgatTCCTGTGGGGGCTGTGGAGGACCCGGATGACGCATGAGCCTCGCCAGGAGGTGTTGGTGGCGGACAACTCACGACTCcagtgggcgctgtggaggagcCGTTCGACGCAGGAGCCTCGCCAGAaggtggaggtggcggacaacGCGCGACTTCTGTGGGGGCTGTGGAGGACAAGGGTGACGCAGGagcctcgccaggaggtggaggtggcggacaaTTTGCGACTTCTGTGGGCGCTGTGGATGACCCGGGCGACGCAGTATCCACACCAAACCTGGGCGacgcaggaggtggaggtggtggacaACCCGCGACTCCTGATGGCGATGTGGAGAACCAGGGCGacgcaggaggtggaggtggtggacaACCCGCGACTACTTTTGGACGCTgtggagaacccgggcgacgcaggaggtggaggtggtggacaACCCGCGACTCCTGTGGGCAATGTGGAGAACCCGGGCGAtgcaggaggtggaggtggtggacaactcgcgactcctgtaggcgctgtggaggacccggcgacgcaggaggtggaggtggtgtaCAACCTGCGACTCCTTGTGGGCGCTGTGGTGGACTCGGGTGACACTGGAgaggtggaggtggtagACAACCCGCGACTCCTGATTGCGCTGTGGACAACCTGGCCGacgcaggaggtggaggtggtggacaACCCGCGACTCCTtttgggcgctgtggaggacccgggcgacacTGGAgtctcaccaggaggtggaggtggcggacaactcgcgactcctgtgggcgctgttgAAGACCCAAACAATGCAGAAGTTGGAGGtggtggacaactcgcgactcttGTGGGCGCTGTGAAGGACCCGGGCGACGCACGAGCCTCGCCAGGAGAtggaggtggcggacaactcgcgactgcTGTGGTCACTGTGGAGGACCCTTGTGACGCAGGAGCCTCGCTAGAAGGTGAAGGTGGTGGAAatctcgcgactcctgtgggcgctgtggaggaacCGGGCGACGCAGGAGCCTCTCCAGGAGGTGGATTtggtggacaactcgcgactcctgtgggcgctgtagAGGATTCGGGGGACGCAGGAGCTTCGCCGgaggtggaggtggcggacaactcgcgacaCCTGTGGTCCTTGTGGAGGACCCGGACGAtgcaggagcctcaccaggagttGCAGGTGGcagacaactcgcgactcctgtgggcgctgtggaggacccgggcgacgcagAAGTTGGAGGTGGTGGACATTCGCGACTCCTGTGTGCGCTGTAGAGTACTCGGGCGACGCAGGAGCTTCGCCGgaggtggaggtggcggacaactcgcgactgcTGTGGTCACTGTGGAGGACCCTTGTGACGCAGGAGCCTCGCTAGGAGGTGAGCGTATCCAGGAGGTGGATTtggtggacaactcgcgactcctgtgggcgctgtggtgGACCCGGGCCACGAAAGGGCCTCATCAGGAGGTGGATTtggtggacaactcgcgactcctgtgggtgCTGTGGATGACCCGGGCGACGCAGGAGCTTCGCCAGGAGCtggaggtggcggacaactcgcgacacctgtgggcgctgtggaggattCGGGCGACGCAGGAGCTTCGCCGGTgGACCCAGGCGATAAAGAAGGTTGCGGtggtggacaactcgcgactcctgtgggtgctgtggaggacccgggcgacgcagGAGCCTCGCCAGGAGGAGGAGCTGGTGGACAAcacgcgactcctgtgggcgctgtggaggaacCGGACGACACAGGAGTTCCgacaggaggtggaggtggcggacaactTAGGACTTCTGTGGTCGCTCTGGAGGACCCGGACGACGCAGAAGTTGGAGGtgtgggcgctgtggaggacccgttCGATGCAGGAGCCtagccaggaggtggaggtggtggacaactcgcgactccagTGGGCGCCGTGGAGGACCCGTTGGACGCAGGAGCCtagccaggaggtggaggtggtggacaACTCGCGACACCTGTGGTcactgtggaggacccgggcgacgcagGAGGTTGAGGTGGTGGACAACCCGCGACTCCagcgggcgctgtggaggacccgggcgacgcagGAGCTGAGACACTTCAggtgtctcatgtga
Protein Sequence: MDTATRSYRRQPRQEEEVVDNSRLLWAMWMTRSSQEPRQDMEVVDNLRLLWALWRTGAMQEPRQEVDVLDNSRLLTRATQETRQEVDGVDNSRLLWALWRTRATQEPRQEVDVVDNSSRATQVLRQVDVVDNSRLLWALWRTRATQEPRQVVEVAENSRLLWAMWMNRSSQEPRQEMEVVDNLRLLWALWRTGAMQEPRQEVDVVDNSRLLWALWRTRATQEPRQVVEVAENSRLLWALCRTGAMQEPRHYVDVVDNTRLLWALWRTRAMQEPRQEVDVVDNSRILWALWRTRAMQEPRQEVDVVDNSRIKWALWRTPATQEPRQEVDVADNSRLLWALWRTQAMHELRQEVYVVDNSRLLWALWRTGAMQEPRQEVDVVDNSRLLTRATQDTRQEVDGVDNSRLLWALWRTRASQEPRQEVDVVDNSSRATQVLRQEVDVVDNSRLLWALWRTRATQEPHQVVEVVEHSRLLWALWRTGAMQEPRQEVDVVDNSRLLWALWRTRATQEPRQDVDVVDISRILWALWRTRAMQEPRQEVNVVDNSRILWALWRTRATQEPRQKVDVADNSRLLWALWRTQATQELRQEVDVVDNSRLLWALWRTGAMKEPRQEVDVWDNSRLLWALWRTWATQEFRQEVDVVDNSRLLWALWRTRATQEPRQEEPRQEVDVPDDLRLLWALWRTRATQELRQVVDVVENSRHLWALWRTRTTQEPRQVVEMAHNSRLLPGRRRSLARRLMWWTTRESWGIVEDQGDAKASPGGGCSGQLSTPVGDVEDLGDAGASPGGRCGGHSRLLWSWWRTGAMQEPRQEVDVVDNSRLLRALWWTRATQEPRQEVEVADKSRLLWALWRTQATQELCQEVDVVDNSRLLWALWRTRAMQEPRQEVDVVDNSRILCALWRTRATQEPRQEVEVADNSRLLWALWRSRATQEPRQEVDVVDNSRILWALWRTRATQEPRQEVEVADNSRLLWALWRSRATQEPRQEVDVVDNSRILWALWSTRVTQEPRQEVDVVDNSRILWALWRTRATQEPRQVVEVANNSRLLWALWRSRATQEPLQEVDVVDNSRILCALWRTRATQELRQEVKWRTRATMDPRQKVEVADNSRFLWGLWRTRMTHEPRQEVLVADNSRLQWALWRSRSTQEPRQKVEVADNARLLWGLWRTRVTQEPRQEVEVADNLRLLWALWMTRATQYPHQTWATQEVEVVDNPRLLMAMWRTRATQEVEVVDNPRLLLDAVENPGDAGGGGGGQPATPVGNVENPGDAGGGGGGQLATPVGAVEDPATQEVEVVYNLRLLVGAVVDSGDTGEVEVVDNPRLLIALWTTWPTQEVEVVDNPRLLLGAVEDPGDTGVSPGGGGGGQLATPVGAVEDPNNAEVGGGGQLATLVGAVKDPGDARASPGDGGGGQLATAVVTVEDPCDAGASLEGEGGGNLATPVGAVEEPGDAGASPGGGFGGQLATPVGAVEDSGDAGASPEVEVADNSRHLWSLWRTRTMQEPHQELQVADNSRLLWALWRTRATQKLEVVDIRDSCVRCRVLGRRRSFAGGGGGGQLATAVVTVEDPCDAGASLGGERIQEVDLVDNSRLLWALWWTRATKGPHQEVDLVDNSRLLWVLWMTRATQELRQELEVADNSRHLWALWRIRATQELRRWTQAIKKVAVVDNSRLLWVLWRTRATQEPRQEEELVDNTRLLWALWRNRTTQEFRQEVEVADNLGLLWSLWRTRTTQKLEVWALWRTRSMQEPSQEVEVVDNSRLQWAPWRTRWTQEPSQEVEVVDNSRHLWSLWRTRATQEVEVVDNPRLQRALWRTRATQELRHFRCLM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -