Bros060337.1
Basic Information
- Insect
- Bacillus rossius
- Gene Symbol
- -
- Assembly
- GCA_032445375.1
- Location
- CM063646.1:37935604-37949595[-]
Transcription Factor Domain
- TF Family
- NF-YA
- Domain
- CBFB_NFYA domain
- PFAM
- PF02045
- TF Group
- Other Alpha-Helix Group
- Description
- Diverse DNA binding proteins are known to bind the CCAAT box, a common cis- acting element found in the promoter and enhancer regions of a large number of genes in eukaryotes. Amongst these proteins is one known as the CCAAT-binding factor (CBF) or nuclear transcription factor Y (NF-Y) [1]. CBF is a heteromeric transcription factor that consists of two different components both needed for DNA-binding. The HAP protein complex of yeast binds to the upstream activation site of cytochrome C iso-1 gene (CYC1) as well as other genes involved in mitochondrial electron transport and activates their expression. It also recognises the sequence CCAAT and is structurally and evolutionary related to CBF. The first subunit of CBF is known as CBF-A or NF-YB in vertebrates, and HAP3 in budding yeast. The second subunit is known as CBF-B or NF-YA in vertebrates and HAP2 in budding yeast. It is a protein of 265 to 350 amino-acid residues which contains a highly conserved region of about 60 residues. This region, called the 'essential core' [2], seems to consist of two subdomains: an N-terminal subunit-association domain and a C-terminal DNA recognition domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.009 3.2e+02 4.5 0.0 36 52 138 154 122 155 0.76 2 19 0.0032 1.1e+02 5.9 0.3 29 52 156 179 150 181 0.77 3 19 0.71 2.5e+04 -1.6 0.0 37 52 189 204 182 205 0.83 4 19 0.18 6.3e+03 0.3 0.0 30 52 207 229 197 230 0.77 5 19 0.67 2.4e+04 -1.5 0.0 35 52 286 303 269 304 0.77 6 19 3 1.1e+05 -3.7 0.0 22 51 322 351 320 353 0.71 7 19 0.0038 1.4e+02 5.7 0.1 29 52 469 493 440 494 0.81 8 19 0.053 1.9e+03 2.0 0.0 33 52 547 566 538 567 0.80 9 19 0.2 7.3e+03 0.1 0.0 30 50 619 639 589 642 0.55 10 19 0.85 3e+04 -1.8 0.0 34 46 679 691 670 696 0.76 11 19 0.0039 1.4e+02 5.7 0.1 29 52 919 943 884 944 0.81 12 19 0.053 1.9e+03 2.0 0.0 33 52 997 1016 988 1017 0.80 13 19 0.24 8.7e+03 -0.1 0.0 30 51 1069 1090 1041 1092 0.61 14 19 0.81 2.9e+04 -1.8 0.0 34 46 1153 1165 1143 1170 0.75 15 19 0.43 1.5e+04 -0.9 0.0 38 51 1433 1446 1428 1449 0.86 16 19 0.36 1.3e+04 -0.7 0.1 31 52 1451 1472 1443 1473 0.75 17 19 3 1.1e+05 -3.7 0.0 30 51 1688 1709 1681 1710 0.73 18 19 0.061 2.2e+03 1.8 0.0 32 52 1779 1799 1745 1800 0.82 19 19 0.22 7.8e+03 0.0 0.0 34 52 1832 1850 1813 1851 0.75
Sequence Information
- Coding Sequence
- ATGCAGATGTTAGATGCGATGAAGGTGTTAGTGGTGTGCACGTTGTGTGCGGAGCTAGTGTGCGTGAAGGTGCGGAGTCTGCGAGGGCCTCGACACGTCCCGGACGACGAGGCTGTCTTGGAGAACCGCGAACCAGGGTCGCTGGTTGAAGCTAAAGACCGGAGACACACGTGGGTTCGATGGCCTAACGGGCTGAGTAGCATGGACAAcccgcgactcctgtgggcgctgtctAGGACCTGGGCGacgcaggaggtggaggtggtggacaattcgcgactcctgtgggcgctgtggagcaCCTGGGCGAAGCAGGAACCTCGCCAGGGTATGGAGGtggtggacaactcgcgactcctgtgggcgctgtggaagACCCGGGCGTCGCAGGATCCTCACCAGGAGGTAAtggtggcggacaactcgcgacacctgtgggcgctgtggaggacccgggcgacacagaagcctcgccaggaggtgaaggtggcggacaactcgcgacacctgtgggcgctgtggaggacccgttCGACGCAGGAGCCTAGCCAGGAGGTGGATGtggtggacaactcgcgactcctctGGGCGCTgtggagaacccgggcgacgcaggagcctcgccaggaggtggaggtggtggacaactcgcgacttctgtgggcgctgtggagaacccgggcgacgcaggaggtggaggtggtggacaACCCGCGACACCAGACCCGGGTGACGCAGGAGCCTCGCCAGGAATtggaggtggcggacaactcgcgtCTCCTGTGGGTGCTGTGGAGGAACCTGGCGAcgcaggagcctcaccaggaggtggtggtgGAGTCAAGCCAGCAGGTGGAGGTGGTGGActactcgcgactcctgtgggcgcttttgaggacccgggcgacgcagGAGGTGGATGTGGAGGACAACCCGCGACTCCtatgggcgctgtggaggacccgtgCGACGCAGAATGTGGAGAAGCCTCGCCAGGATGTGAAGTTTGCGGACAACTCGccactcctgtgggcgctgtggaggacccgggcgacacTGGAGTCTCGCCAAgaggtggaggtggcggacaacACGCGACTCCTGTGGTCGCTGTTGAAGACCCGGGCGACGCAAAagcctcgccaggaggtggaggtggtgggcAACTCGCGAATCCTGAGCTTCGCCGGAGGTGGAGGTGACGGACAACTCGCTACTCCTtttgggcgctgtggaggacccgggcgacacTGGAGTCTCGCCAAgagGAGGTGGAGATGGTGGACAACCCGCGACTCCTtttgggcgctgtggaggacccgggcgacacTGGAGTCTCGCCACgaggtggaggtggcggacaactcgcgacttcTGTGGTCGCTGTTGAAGACCCGGGCGACGCTAAagcctcgccaggaggtggaGGCGGTGGGCAACTCCCGAcacctgtgggcgctgtggaggacccgggcgacgaAGGATCCTCACTTGGAGGTGAAGGTGGCGGACAACTCCCGACTCCTGTGGGGGCTGTGGAGAACCCGGCCGacgcaggaggtggaggtggttgACAACCCGCGACTCCTtttgggcgctgtggaggacccgggcgacacTGGAACCCGGGCAACGCAGAAGTTGGAGGTGGTAGACAACTCGCGACTCTTGTGGGCGCTGGGGAGGACCCGGGGGTCGCACGAGGCTCGCCAGGAGATGGAGGTGGCGGACAACTTGCGaatcctgtgggcgctgtggaggccccggtcgacGCCGGATCCTCACCAGGAGGTGaaggtggcggacaactcgcgacaCCTGTGGGCGCTGTTAATGACTCGTTCGACGCAGGAGCCtagccaggaggtggaggtggtggtcaactcgcgactcctgtgggcgctgtggaggacccgggcgacgcaggagGACCCTTGTGCCGCAGGAGCTTCGCCAGAAGGTGGAGGTGGCGGAAAACTCGCGACTCCTTGGGCGCTGTGGATGACCCGGTCGACGCCGGATCCTCACCAGGAGGTGaaggtggcggacaactcgcgacaCCTGTGGGCGCTGTTAATGACCCGTTTGATGCAGGAGCCtagccaggaggtggaggaggtggaggtggtggacaACCCGCGACTCCTGATGGCGATGTGGAAAACCAGGGCGacgcaggaggtggaggtggtggacaACCCGCGACTACTTTTGGACGCTgtggagaacccgggcgacgcaggaggtggaggtggtggacaACCCGCGACTCCTGTGGGCAATGTGGAGGTCCCGGGCGACACAGAAGCCTCGCCAGGATGTGAAGTTTGCGGACAACTCGccactcctgtgggcgctgtggaggacccgggcgacacTGGAGTCTCGCCAAgaggtggaggtggcggacaacACGCGACTCCTGTGGTCGCTGTTGAAGACCCGGGCGACGCAAAagcctcgccaggaggtggaggtggtgggcAACTCGCGAATCCTTTGGGCGCTGTGAAGAACCCGGGCGACGCACGAGCCTCGCAGGTGATGaaggtggcggacaactcgcgactgcTGTGGTCACTGTGGAGGAACCTTGTGCCGCAGGAGCTTCGCCGGAGgaggtggaggtggtggacaACCCGCGACTCCTtttgggcgctgtggaggacccgggcgacacTGGAGTCTCGCCACgaggtggaggtggcggacaactcgcgacttcTGTGGTCGCTGTTGAAGACCCGGGCGACGCTAAagcctcgccaggaggtggaggtggtgggcAACTCCCGAcacctgtgggcgctgtggaggacccgggcgacgaAGGATCCTCACCAGGAGGTGAAGGTGGCGGACAACTCCCGACTCCTGTGGGGGCTGTGGAGAACCCGGCCGacgcaggaggtggaggtggtggacaACCCGCGACTCCTtttgggcgctgtggaggacccgggcgacacTGGAACCCGGGCAACGCAGAAGTTGGAGGTGGTAGACAACTCGCGACTCTTGTGGGCGCTGGGGAGGACCCGGGGGTCGCACGAGGCTCGCCAGGAGATGGAGGTGGCGGACAACTTGCGaatcctgtgggcgctgtggaggccccggtcgacGCCGGatcctcaccaggaggtggaggtggcggacaactcgcgacaCCTGTGGGCGCTGTTAATGACTCGTTCGACGCAGGAGCCtagccaggaggtggaggtggtggtcaactcgcgactcctgtgggcgctgtggaggacccgggcgacccaggaggtggaggtggtggacaACCCACGACTCCAGTGGGCGCTGTGGAAGACCTGGGTGACGCAAATGCctcgccaggaggtggaggtggtggGAGCCTCGCCAGAAGGTGGAGGTGGCGGAAAACTCGCGACTCcttgggcgctgtggaggacccgttCGACGCCGGATCCTCACCAGGAGGTGaaggtggcggacaactcgcgacaCCTGTGGGCGCTGTTAATGACCCGTTTGATGCAGGAGCCtagccaggaggtggagGAGGTGGAGGAGGTGGACAACCCGCGACTCCTGATGGCGATGTGGAGAACCAGGGCGACGCAGGAGGTTGAGGTGGTGGACAACCCGCGACTACTTTTGGACGCTgtggagaacccgggcgacgcaggaggtggaggtggtggacaACCCGCGACTCCTGTGGGCAATGTGGAGAACCCGGGCGAtgcaggaggtggaggtggtggacaactcgcgactcctgtaggcgctgtggaggacccggcgacgcaggaggtggaggtggtgtaCAACCTGAAACTCCTTTTGGGTGCTGTGGTGGACTCGGGTGACACTGGAgaggtggaggtggtagACAACCCGCGACTCCTGATGGCGCTGTGGACAACCTGGCCGacgcaggaggtggaggtggtggacaACCCGCGACTCCTtttgggcgctgtggaggacccgggcgacacTGGAGTctcgccaggaggtggaggtggcggacaactcgcgactcctgtgggcgctgttgAAGACCCAAACAATGCAGAAGTTGGAGGtggtggacaactcgcgactcttGTGGGCGCTGTGAAGGACCCGGGCGACGCACGAGCCTCGCCAGGAGAtggaggtggcggacaactcgcgactgcTGTGGTCACTGTGGAGGACCCTTGTGACGCAGGAGCCTCGCTAGGAGGTGAAGGTGGTGGaaaactcgcgactcctgtgggcgctgtagAGGATTCGGGGGACGCAGGAGCTTCGCCGgaggtggaggtggcggacaactcgcgacaCCTGTGGTCCTTGTGGAGGACCCGGACGAtgcaggagcctcaccaggagttGCAGGTGGcagacaactcgcgactcctgtgggcgctgtggaggacccgggcgacgcagAAGTTGGAGGTGGTGGACATTCGCGACTCCTGTGTGCGCTGTAGAGTACTCGGGCGACGCAGGAGCTTCGCCAAaggtggaggtggcggacaactcgcgacaCCTGTAGTCACTGaggaggacccgggcgacgcagGAGCCTCGCCAGGAGGTGAATGTGGTGGACagctcgcgactcctgtgggcgctgtggaggacccgggcgacAGGACCCGGGTGACGCACAAGCCTCGCCAGGAGATGGAGGTGGCGGATAACTCGCGACTGCTGTGGTCACTGTGGAGGACCCTTGAGCCTCTCCAGGAGGTGGATTtggtggacaactcgcgactcctgtgggcgctgtggtgGACCCGGGCGACGAAAGGGCCTCATCAGGAGGTGGATTtggtggacaactcgcgactcctgtgggtgCTGTGGATGACCCGGGCGACGCAGGAGCTTCGCCAGGAGCtggaggtggcggacaactcgcgacacctGACCCGGACGAcgcaggagcctcaccaggagttgcaggtggcggacaactcgcgactcctgtgggcgctgttgAGGACCCAGGCGATAAAGAAGGTTGCGGtggtggacaactcgcgactcctgtgggtgctgtggaggacccgggcgacgcagGAGCCTCGCCAGGAGGAGGAGCTGGTGGACAAcacgcgactcctgtgggcgctgtggaggaacCGGACGACACAGGAGTTCCgacaggaggtggaggtggcggacaactTAGGACTTCTGTGGTCGCTCTGGAGGACCCGGACGACGCAGAAGTTGGAGGtgtgggcgctgtggaggacccgttCGACGCAGGAGCCtagccaggaggtggaggtggtggacaactcgcgactccagTGGGCGCCGTGGAGGACCCGTTGGACGCATAAGCCtagccaggaggtggaggtggtggacaACTCGCGACACCTGTGGTcactgtggaggacccgggcgacgcagGAGCCTCGCCAGGAGAaggtggaggtggcggacaactcgcgatTCCTGTGGGGGCTGTGGAGGACCCGGATGACGCATGAGCCTCGCCAGGAGGTGTTGGTGGCGGACAACTCACGACTCcagtgggcgctgtggaggagcCGTTCGACGCAGGAGCTTAGCCAGGAGGTGAAGGTGGTGGACAACCCGCGagtcctgtgggcgctgtggagaaCTTGGGCGACGCAGGAGGTTGAGGTGGTGGTCAACCCGCGACTCTag
- Protein Sequence
- MQMLDAMKVLVVCTLCAELVCVKVRSLRGPRHVPDDEAVLENREPGSLVEAKDRRHTWVRWPNGLSSMDNPRLLWALSRTWATQEVEVVDNSRLLWALWSTWAKQEPRQGMEVVDNSRLLWALWKTRASQDPHQEVMVADNSRHLWALWRTRATQKPRQEVKVADNSRHLWALWRTRSTQEPSQEVDVVDNSRLLWALWRTRATQEPRQEVEVVDNSRLLWALWRTRATQEVEVVDNPRHQTRVTQEPRQELEVADNSRLLWVLWRNLATQEPHQEVVVESSQQVEVVDYSRLLWALLRTRATQEVDVEDNPRLLWALWRTRATQNVEKPRQDVKFADNSPLLWALWRTRATLESRQEVEVADNTRLLWSLLKTRATQKPRQEVEVVGNSRILSFAGGGGDGQLATPFGRCGGPGRHWSLAKRRWRWWTTRDSFWALWRTRATLESRHEVEVADNSRLLWSLLKTRATLKPRQEVEAVGNSRHLWALWRTRATKDPHLEVKVADNSRLLWGLWRTRPTQEVEVVDNPRLLLGAVEDPGDTGTRATQKLEVVDNSRLLWALGRTRGSHEARQEMEVADNLRILWALWRPRSTPDPHQEVKVADNSRHLWALLMTRSTQEPSQEVEVVVNSRLLWALWRTRATQEDPCAAGASPEGGGGGKLATPWALWMTRSTPDPHQEVKVADNSRHLWALLMTRLMQEPSQEVEEVEVVDNPRLLMAMWKTRATQEVEVVDNPRLLLDAVENPGDAGGGGGGQPATPVGNVEVPGDTEASPGCEVCGQLATPVGAVEDPGDTGVSPRGGGGGQHATPVVAVEDPGDAKASPGGGGGGQLANPLGAVKNPGDARASQVMKVADNSRLLWSLWRNLVPQELRRRRWRWWTTRDSFWALWRTRATLESRHEVEVADNSRLLWSLLKTRATLKPRQEVEVVGNSRHLWALWRTRATKDPHQEVKVADNSRLLWGLWRTRPTQEVEVVDNPRLLLGAVEDPGDTGTRATQKLEVVDNSRLLWALGRTRGSHEARQEMEVADNLRILWALWRPRSTPDPHQEVEVADNSRHLWALLMTRSTQEPSQEVEVVVNSRLLWALWRTRATQEVEVVDNPRLQWALWKTWVTQMPRQEVEVVGASPEGGGGGKLATPWALWRTRSTPDPHQEVKVADNSRHLWALLMTRLMQEPSQEVEEVEEVDNPRLLMAMWRTRATQEVEVVDNPRLLLDAVENPGDAGGGGGGQPATPVGNVENPGDAGGGGGGQLATPVGAVEDPATQEVEVVYNLKLLLGAVVDSGDTGEVEVVDNPRLLMALWTTWPTQEVEVVDNPRLLLGAVEDPGDTGVSPGGGGGGQLATPVGAVEDPNNAEVGGGGQLATLVGAVKDPGDARASPGDGGGGQLATAVVTVEDPCDAGASLGGEGGGKLATPVGAVEDSGDAGASPEVEVADNSRHLWSLWRTRTMQEPHQELQVADNSRLLWALWRTRATQKLEVVDIRDSCVRCRVLGRRRSFAKGGGGGQLATPVVTEEDPGDAGASPGGECGGQLATPVGAVEDPGDRTRVTHKPRQEMEVADNSRLLWSLWRTLEPLQEVDLVDNSRLLWALWWTRATKGPHQEVDLVDNSRLLWVLWMTRATQELRQELEVADNSRHLTRTTQEPHQELQVADNSRLLWALLRTQAIKKVAVVDNSRLLWVLWRTRATQEPRQEEELVDNTRLLWALWRNRTTQEFRQEVEVADNLGLLWSLWRTRTTQKLEVWALWRTRSTQEPSQEVEVVDNSRLQWAPWRTRWTHKPSQEVEVVDNSRHLWSLWRTRATQEPRQEKVEVADNSRFLWGLWRTRMTHEPRQEVLVADNSRLQWALWRSRSTQELSQEVKVVDNPRVLWALWRTWATQEVEVVVNPRL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -