Basic Information

Gene Symbol
Trerf1
Assembly
GCA_032445375.1
Location
CM063647.1:42880322-42892119[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-10 7.7e-07 31.6 0.1 2 46 158 202 157 202 0.96

Sequence Information

Coding Sequence
ATGAGCCCGGAGGCTGGCTGGTGTGTACTCCCAGCCTTCACCGCAGGGATGACCACGCTCATTGTGTCCACGGACGGCAGCGCGGAGTCTCCGAGCCCCGACGAGAGCCAGCCGTGCGGCGACCCGGCGCCGGAGAGCGACGGCACCCCTCACATAAACGTGGGCGCCGAGTACCAGAGCGCGGTACCTAAGTGGAACCCGGACCGGGAGAAGGCGAACCGGGAGCCGTCGTACGAGCACCTCCTGTGGGACCCGGGCATCAGCAAGGTCTGCACAGATGCCGAGGTGGACATGTACCTGGAGTTTGCGTGCTGCGCGGCGGTTCCTGGTGGCGGCCGCAACAAGGAGTACGCACTGCACCTTCTGCACATGTGTCACGGGAACATCCACGAGGCGATGCTGAAGCTGATGCAGCCCACGCCCTCCCTGCCCGCGACCCACCCCCTGCTGGCGTACGACTACTGCGAGAGCGACCGGTGGAGCACGGACGAGATGGAGGTGTTCCACCAGGGGCTGCTCAAGTACGACAAGGACTTCACCAGCGTGGCCCACGAGATTGGTTCGAAGACCACGAAGCAATGTATTCAGTTCTACTACTTGTGGAAGAAAGTGTGTCCTGAGGAGTACAAAAGGCTACGTCTGATCAGGAGGAGGCAGAATGCAGACTTCGGTTCCCGGATGGATCTCGACTTTGAAGACATCAAGCTAGAGGATTCCCGAAGTAGCATTCCTGCCAGTGACGTTGAACTGGTGACGACGAGCTCTGAAAGCCGCTTGTATGTCTGTGAATATCCTGACTGTTCAGCTAGCTTCAACTCGAGGGCGGCGCTGAACGGCCACATCCGCATCCACGCCGGGGGCGCGAGCGGGCGGTCGCCCACCCCGGACAAGCGGCCCGCCACGGCGACGCCCCCCGCCCTCGGCGACCTTCTCGAGGAGTTCCCCTGCAAGATCTGCGGGAAGGTGTTCAACAAGGTGAAGAGCCGGAGCGCCCACATGAAGTCCCACCGGCCGCCCGACGCGGAGCCCAAGAAGCCAAAACTCGACCCCCACAAGATGGAGTCGGCGGAACAGACGCTGGGGCGCGCCATGGGGGTCTCGTCCAGCGTGGGCGGGAGCCTGGGGCGGCACACCTGA
Protein Sequence
MSPEAGWCVLPAFTAGMTTLIVSTDGSAESPSPDESQPCGDPAPESDGTPHINVGAEYQSAVPKWNPDREKANREPSYEHLLWDPGISKVCTDAEVDMYLEFACCAAVPGGGRNKEYALHLLHMCHGNIHEAMLKLMQPTPSLPATHPLLAYDYCESDRWSTDEMEVFHQGLLKYDKDFTSVAHEIGSKTTKQCIQFYYLWKKVCPEEYKRLRLIRRRQNADFGSRMDLDFEDIKLEDSRSSIPASDVELVTTSSESRLYVCEYPDCSASFNSRAALNGHIRIHAGGASGRSPTPDKRPATATPPALGDLLEEFPCKICGKVFNKVKSRSAHMKSHRPPDAEPKKPKLDPHKMESAEQTLGRAMGVSSSVGGSLGRHT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00189474;
90% Identity
iTF_00189474;
80% Identity
iTF_00189474;