Basic Information

Gene Symbol
CDC5L
Assembly
GCA_032445375.1
Location
CM063640.1:323857660-323901284[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5e-14 1e-10 44.0 1.3 9 46 11 49 9 49 0.97
2 2 3.8e-12 2.6e-08 36.3 0.1 1 45 55 98 55 99 0.93

Sequence Information

Coding Sequence
ATGGGCCGTGTGCTTGTGAACTGCAATCAGGACGAGATCCTGAAGGCAGCAGTGATGAAGTACGGCAAGAACCAGTGGTCGCGGATCGCGTCGCTGCTGCACCGCAAGTCCGCCAAGCAGTGCAAGGCGCGCTGGTACGAGTGGCTGGACCCCAGCATCAAGAAGACGGAGTGGAGCCGCGAGGAGGACGAGAAGCTGCTGCATCTGGCCAAGCTGATGCCGACCCAGTGGCGCACCATCGCGCCCATCATTGGCCGCACTGCCGCCCAGTGCCTGGAGCGCTACGAGTACCTGCTTGACCAGGCGCAGAAGAAAGAAGAAGGTGAAGATGCCGCAGATGATCCGCGCAAGTTGAAACCTGGTGAGATCGACCCAAACCCTGAGACGAAACCAGCTCGTCCGGACCCCAAAGATATGGATGAAGATGAGTTGGAGATGCTGTCTGAAGCCAGGGCAAGGCTGGCAAACACGCAGGGAAAGAAAGCTAAACGCAAGGCACGAGAGAAGCAGCTTGAAGAAGCCAGAAGGCTAGCAGCTTTGCAGAAACGGCGGGAGCTGCGTGCGGCTGGCATAGAGCTGGCGCCCCGCAAGAAGAAGAAGCGAGGCGTGGACTACAACGCGGAGATCCCGTTCGAGAAGCGGCCTGCGCCGGGCTTCTACGACACGAGCCAGGAGGTGGTGGACCCGCTGGCCCCCGACTTTGCGCGGCTGCGGCAGCAGCACCTCGACGGGGAGCTGCGCACGGAGAAGGAGGAGCGCGACCGCCGCAAAGACAAGCAGAAGTTGAAGCAACGGAAAGAGAACGATGTCCCGTTGGCGATGCTGCAGAACCAGGAACCGGCTAAGAAGAGAAGTAAGCTCGTGCTGCCTCACCCGCAGATAACAGACGAGGAACTGGAACGGGTGGTGAAGCTGGGGCGAGCGAGCGAGGCGGCCCGGGAGGTGGCCGCGGAGGGCGGCCGGCAGCCCTCGGACGCCCTGCTGGGGGACTACGCCCTCGCGCCGGCGGGCCCCGCGCGCACCCCGCGCACGCCGGCTCCCGCCACCGACCGCATCCTGCAGGAGGCCCAGAACGTGATGGCCCTCACTCACGTGGACACGCCCCTCAAGGGGGGCACCAACACACCGCTGCACGGCTCGGACTTCGGAGGCGTGGCGCCCCAGCGCGAGGCCGTGCACACTCCCAACACGGTGCTGGCCACGCCCTTCAGGAGCGCGCGCAACGAGGTGCGCACGCCTGGATCGCAGACTAGCTTCAGCACTCCTGGCCAAGAAGTGGTGCTTCACGGCAGCGCACGGGGCCAAGTTCCGACGCCCATCAGAGACAAGCTCAgcatcaaccctgaagaaggcTTGGAGACCCCTCAGGCCTTCTCGCACTACCAGCGACAGGTGAAGGAGCAGCTGCGGCAGGGCCTCGGCATGCTGCCGGCCCCGCGCAACGACTACGAGATAGTCGTGCCCCAGGAGGACGAGGACGCCGAGCTGCCCCCCGAGCAGGGCCGTCTGCTGGAGGACCAGGCAGACGTGGACGCCCGTCGCCTGCAGGAGATCAAGGCCAGGAGGGAACAGGAGCTTCGCAGTCGATCTCAGGCAGTTCAGAGAGACCTGCCACGACCACAAGAAATCAACATGGCGGTGTTGCGACCCCCGCACTCGGACCCACCGCTTACGGAACTGCAAAAGGCAGAAGAACTAATCAAAAGTGAAATGGTGACGATGCTGCATTACGACGCAGTGTACTCACCCGTGCCGCTGCTAGCAGACTCTAAGAAACTGCGCAGCCAGGTCGCGACCCAGGCACAGCACTTGGCCTTTCTGGAGCAGCATCCTTACGAGAACTGCAGCACTGACACTTTGCAGCAGGCCAGAGAAATGCTGAAGCAGGAGATGGAATTTGTAAAACAAGGAATGGGCCACGGCGACCTCTCGTTGGAGTCATACACGCAAGTGTGGGAAGAATGTCTGGCTCAGGTCCTGTTTTTGCCAAACCAAAATCGTTACACTCGTGCCAACCTCGCTAGCAAGAAGGACAGGCTAGAGTCTCTGGAGAAGAGACTGGAACAGAACCGAGGACACATGACTCGTGAAGCCAAACGCGCAGCCAAGATGGAGAAGAAGCTGAAGATTCTTACGGGTGGCTATCAGTCACGAGCACAAGCCCTGATCAAGCAGCTGGTGAGTCTCTTCGACCAGATTGAGCAGTCGCAGCTGGAGCTCTCTACGTTCAAGTTCCTGCAGCAACAAGAGATGGCGGCCATTCCTCGCAGGATAGAGTCGCTAACGGAGGATGTAATGAGACAAACAGAACGTGAGAAGGGTTTGCAGAAAAAGTATGCAGAGCTGAAAAGTGAGTTGGAGCAGTTGCAACAAGCCTGA
Protein Sequence
MGRVLVNCNQDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGEDAADDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIELAPRKKKKRGVDYNAEIPFEKRPAPGFYDTSQEVVDPLAPDFARLRQQHLDGELRTEKEERDRRKDKQKLKQRKENDVPLAMLQNQEPAKKRSKLVLPHPQITDEELERVVKLGRASEAAREVAAEGGRQPSDALLGDYALAPAGPARTPRTPAPATDRILQEAQNVMALTHVDTPLKGGTNTPLHGSDFGGVAPQREAVHTPNTVLATPFRSARNEVRTPGSQTSFSTPGQEVVLHGSARGQVPTPIRDKLSINPEEGLETPQAFSHYQRQVKEQLRQGLGMLPAPRNDYEIVVPQEDEDAELPPEQGRLLEDQADVDARRLQEIKARREQELRSRSQAVQRDLPRPQEINMAVLRPPHSDPPLTELQKAEELIKSEMVTMLHYDAVYSPVPLLADSKKLRSQVATQAQHLAFLEQHPYENCSTDTLQQAREMLKQEMEFVKQGMGHGDLSLESYTQVWEECLAQVLFLPNQNRYTRANLASKKDRLESLEKRLEQNRGHMTREAKRAAKMEKKLKILTGGYQSRAQALIKQLVSLFDQIEQSQLELSTFKFLQQQEMAAIPRRIESLTEDVMRQTEREKGLQKKYAELKSELEQLQQA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01566897;
90% Identity
-
80% Identity
-