Bros038429.1
Basic Information
- Insect
- Bacillus rossius
- Gene Symbol
- -
- Assembly
- GCA_032445375.1
- Location
- CM063642.1:88449766-88451532[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.6e-08 9.9e-05 24.4 0.0 4 38 11 46 9 51 0.89
Sequence Information
- Coding Sequence
- ATGGCTCCCCGAAAATCTTGGAACTCTGCTGCCATGGTGACAGCCATCATTGCTGTGAGAAACAAAGATATGGGGTATAAAGCGGCTGCCAAATTATTCAACGTTCCTAGGGCTACCCTGAAGGACTACGTGAAGTCTCCTCATACACCAGAAGAATGTGTAAGTACAAAATTTGGAAGAAAACCTGTTTTTTCTTCAGAGCATGAGAATAGCCTCGTGGAATACTGTCTGGACATGGACCACCATTACTATGGTCTTACTATCTCAGATTTGAGACGAATGGCCTACCAGTTGGCTGTTAAGAACAACCTTCCAAATCCCTTTTCAAGGGAAACAAAGGCTGCTGGTAAAAAGTGGGTCCGACTATTTTTTAAGCGTCATCCTGAACTTACTCTGAGGAGGCCACAGAACCTCTCAATAGCTAGAGCCAAAGGGTTCACTAAAGATAACGTTCACAAGTTCTTTTCACTTCTGAAGGTCGAACTTGAAAGAATTAACTTTGATCCATCGAAAATCTTCAATGTGGACGAAACTGGGATCAGTGTGGTACAGCACAAGGCATCCAGAGTGGTTACCAGTAAGGGACAAAAACAAGTGCACAGACTGTCATCAGCAGAGCGTGGGGCAACAATTACAGTCATAACCTGTATGTCAGCTGCCGGCCACTACATCCCCCCTCTTCTAATATTTCCGCAGAAAAGGTGGCAGGTTGAACTGCTCGATGGTGCCCCTCCAGGCTCGATTGGTGGAACCTCAGAATCAGGTTGGGTTACTGGACCTTTGTTCCTGATGTGGTTTGAGCATTTCATATCCATAGTTAAGCCTACAAAAGAGGCGCCTGTAGTGCTCATACTGGATGGGCACTATTCCCACACCAGGAATGTTGAGGTCATTGACCGGGCAAGGGAAGTCGGGGTGTCAATTGTTTGCCTCCCACCCCACTCAACAGACAAAATGCAGCCGTTGGATGTGGCATTCATGTTCCCACTGAAAACTCTGTACGCAAAGGCCATTGAACAATGGTTGGCTAATAACCCCAACAGAATTGTGAGGAAACTCCAAGTTTCCTCTTTGTTTTGTGAAGCCTATCTTCGAGCTGCTACACTCGAAACTGCGGCTAATGGGTTCCGAGCTACTGGAATTCATCCATTTAACCCTGATGTCTTTCAAGAGCATCATTTTGCTGCTAAAGCAATGGAGGTTGTGGAGGAATCAGTCAATGATGAAACTGCAATTGGGATTGCACCTACTGGTCCACCCCAAGTGATCAGGCCAAGAGACATCAGAGAGGTTCCTATCATCCAGGCTTCAACATCTGTCAGAGCTGGCACATCTTTCTTGGTTACAGGATCTCCCCACAAGACAGCACTAACAGTCTCCTTGGAGAAACGTAAGAACCGTGAAAAGCGTCAGACAAAAGGACCAGCACCACAAACCAAAAAACAGCTCAACATGGGATCTACATGTCAGCCAGTGCCAGGAGCATCCTCTAAGCTTACAAAACCACGCAGGAAGCAAACAAGGCGATGTGATGTGAGTTCCAGTGACACCGAGGACGAAACACACATTCCTCTTGTATCGACCGATGATGAAGACAGTTCTGATGAAGGTGATGTGTCATGCCCTATTTGTGGAAAAAACTTTTCGCAGGACAAGCGAGGAGAAAAATGGGTTAAGTGCACCAAATGCTTCCAATGGTGTCATGAAATGTGTTCTTCCTCCCCaggaaacaaaaattttgtatgCGATTTCTGTTTGGATGGATAA
- Protein Sequence
- MAPRKSWNSAAMVTAIIAVRNKDMGYKAAAKLFNVPRATLKDYVKSPHTPEECVSTKFGRKPVFSSEHENSLVEYCLDMDHHYYGLTISDLRRMAYQLAVKNNLPNPFSRETKAAGKKWVRLFFKRHPELTLRRPQNLSIARAKGFTKDNVHKFFSLLKVELERINFDPSKIFNVDETGISVVQHKASRVVTSKGQKQVHRLSSAERGATITVITCMSAAGHYIPPLLIFPQKRWQVELLDGAPPGSIGGTSESGWVTGPLFLMWFEHFISIVKPTKEAPVVLILDGHYSHTRNVEVIDRAREVGVSIVCLPPHSTDKMQPLDVAFMFPLKTLYAKAIEQWLANNPNRIVRKLQVSSLFCEAYLRAATLETAANGFRATGIHPFNPDVFQEHHFAAKAMEVVEESVNDETAIGIAPTGPPQVIRPRDIREVPIIQASTSVRAGTSFLVTGSPHKTALTVSLEKRKNREKRQTKGPAPQTKKQLNMGSTCQPVPGASSKLTKPRRKQTRRCDVSSSDTEDETHIPLVSTDDEDSSDEGDVSCPICGKNFSQDKRGEKWVKCTKCFQWCHEMCSSSPGNKNFVCDFCLDG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00188966;
- 90% Identity
- iTF_00188967; iTF_00188975;
- 80% Identity
- -