Bros006351.1
Basic Information
- Insect
- Bacillus rossius
- Gene Symbol
- bab1
- Assembly
- GCA_032445375.1
- Location
- CM063640.1:89754866-89760405[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-17 5.5e-14 54.1 0.0 1 43 28 71 28 73 0.95 2 2 7.8 1e+04 -1.2 1.3 6 15 169 178 167 182 0.87
Sequence Information
- Coding Sequence
- ATGTGGCAGAAGTGCTGGAACACCAACCAGAGCCTGGTGCACAACCTGCGGTTCCGGGAGCGCGGGCCGCTCAAGTCGTGGCGGCCCGAGACCATGGCCGAGGCCATCTTCTCCGTGCTGAAGGAGGGGCTGTCGCTGTCGCAGGCCGCCCGCAAGTACGACATCCCGTACCCCACGTTCGTGCTGTACGCCAACCGCGTGCACAACATGCTGGGGCCGTCGGTCGATGGGAGCGCAGACCTGCGGCCAAAAGGGCGCGGGCGCCCGCAGCGCATTCTGCTGGGCTCGTGGCCAGAAGACCACATTCATGGGGTGATACGGGCGGTTGTGTTCCGCGACCCTCAACACATCAAAGAAGAACCGCACTTGTCCTACCCGCGCCTTCCAGTGAATGCAGCACCGTATCACTCGCGTAACACTCTGGAGCAGCTGGGCGTGCAGGGCTACGGCCAGGCCCCCTGCAGCAACGGGCCAGAGCCCACGGTGTCGCCCGGCGCGGCGGCCGCGGCCGCGGTGGCGGCGGTGGCCCAGGGCCTCAGGCAGCAGATGTGCAACATGGTGGCGGCCGCCCAGCACCAGCAGGGGCTGGCGGAGGCCGGCCTGGCGGGCCTGGTGGCGGGCCACTGCGGCCTGCCCCCGGCCAACGGCACGGCCCACGGGGGCCTGCCGCCCTCGCTCTCCCtgccctcccccgccagccctgcCGAGTCGGCCGCCGTCAgccccgccccctcccccgcGGCCATCGACTTCGGCCTGGCCATGGCGTACAAGCCGCCCCCCTCCACGTTCGCCTCGCCTCGCCCCGACCTGTTCCACGAGGAGCTGGAGGAGCTGGTGTCGGCTCACCACGACGGGCTGGTGCGCTCGCCCCTCAAGGCCGAGCCCATCGCAGAGAGCGGCCACGCCGACTAG
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSVDGSADLRPKGRGRPQRILLGSWPEDHIHGVIRAVVFRDPQHIKEEPHLSYPRLPVNAAPYHSRNTLEQLGVQGYGQAPCSNGPEPTVSPGAAAAAAVAAVAQGLRQQMCNMVAAAQHQQGLAEAGLAGLVAGHCGLPPANGTAHGGLPPSLSLPSPASPAESAAVSPAPSPAAIDFGLAMAYKPPPSTFASPRPDLFHEELEELVSAHHDGLVRSPLKAEPIAESGHAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -