Bros075581.1
Basic Information
- Insect
- Bacillus rossius
- Gene Symbol
- lov
- Assembly
- GCA_032445375.1
- Location
- CM063650.1:6897780-6910502[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.4e-06 0.0019 20.4 0.1 1 36 206 241 206 248 0.89 2 4 4.9e-09 6.4e-06 28.3 0.0 3 39 258 293 256 298 0.89 3 4 0.34 4.4e+02 3.2 0.0 24 39 335 350 330 356 0.76 4 4 4.5e-11 6e-08 34.8 0.0 4 41 376 413 373 416 0.92
Sequence Information
- Coding Sequence
- ATGTACGACCACGGGGCGGGCGCGAGGGCGCCCGGGGAGTGCTGCTTCAAGTGGGGCGACTACCCCGCGGACGTGGCCAACATGTTTCTGGAGGTGCTCCGGGCGCAGTGCATGGTGGACGTCACGGTCTGCGCGGAGGGACGCCACCTGCATGCTCACCGCATCGTGCTCTCCGCCTGCAGCGCGTACCTGCAGGAGATTCTGTCTTGCACTGACGATGCCCATCCTGTCCTCATTTTGAGTGGGATCAGTTTTGACGACGTTCAGTCAGTTATCGAATTCATGTATCAGGGAGAGATCAGCGTTGGAGCCGATCGCATAAAGTCTGTCTTAAATACAGCAGAAGAATTGCAAATCCGAGGACTCATGGGGGTCAGCAGCCACTTTGTGGAGGAGGAGGGGGCGACGCTGCCCGAGGAAAGTCCCCCGGAGCACGTTGAAGCGAGCAATGAAGCCGAGGTTGCCGACAGAGAGCCAGGCACCTCGGAAGTTATCGAACCAAGAAGCTCTGATGAAATGGGCCAGGATGAAGATGAGGCGAAAGGTACAGTAAACTTGACCAAATACGACGACAAGAAACGCAGGTGCAGAAGAAAGTCGTGCAGAAAAGATTACAGCGAGGAGGCGCTCGCCGCCGCGCTGGAGGAGCTGAGGGCCGGCCGGTCCCTGGTCAGCACGGCGGGAGAGCACGGCATCCCGCGCTCCACACTGTACGTGCGGGCTCGCTCCCAGGGCATCCAGCTGGCCgtgtgtcgccggggccaccgcGGGGACCGGGTGCAGGCGGCCATCAAGGCGGTCACAGACGGGGCGAGCCTGCAGAGGGCGGCGGAGCAGTACCAGATCCCCAAGACGGTGCTGTGGAGGAACGTGCGCAAGCAGCTGGGGGCCCGGCCCCCCCCGGCGGGCCCCGCCGGCCTCCGCAGGAAGACCTACGACGAGGAGAAGAGGCGAGCCGCGGTCCGGGCCCTAGAGCAGGGCGACAACCTCACCCGGGTCTCCCACCAGTACCAGATCCCGAAGACCACGCTGTTCCGCGAGAAGACGCGCCTGGTGGAGACGGGACGCCTGCCCTGGTCCTGCCTGAAGCGGCGGGGGCCGTACCTGGACTGCTTCAAGCGGAGCCGGCTGGGGGAGGCAGTGGCCGCCTGCCAGGACGGCAGGATGTCGCAGGCCGCGGCGTCCGTCACTTTCCAGGTCCCCAAGACCACGATCTGGCGTCGCCTGCAGGAGCGGGGCGGGGGCAGCGGCCACCCGGGGCGCCGCGGCGGGACGCTGAAGGTGGAGGCGGTTGACGAGGACGAGCCGGCCCCCGTGCAGCAGTTCGCGTTCTCCCAGGTCGGAGGCCACATCCCCGTCACGTACGTGCAGGGGTCAGAGTTCGGGGAGGCGTCGCTCATCATCCTGGACCCGGGGAGGATCGCCGTCGAGGGGAGCGGCCGCGTGGCGGCGGAGCCCCCCTCCTGCCTGCCAGTAGCCCCAGACGTGAGCCGAGCTGGGGCTCAGCCAGTGTGTCTGCAGGTCTCGCAACCCGTCAAACTGGAGGGACGGTCACGAAAATAA
- Protein Sequence
- MYDHGAGARAPGECCFKWGDYPADVANMFLEVLRAQCMVDVTVCAEGRHLHAHRIVLSACSAYLQEILSCTDDAHPVLILSGISFDDVQSVIEFMYQGEISVGADRIKSVLNTAEELQIRGLMGVSSHFVEEEGATLPEESPPEHVEASNEAEVADREPGTSEVIEPRSSDEMGQDEDEAKGTVNLTKYDDKKRRCRRKSCRKDYSEEALAAALEELRAGRSLVSTAGEHGIPRSTLYVRARSQGIQLAVCRRGHRGDRVQAAIKAVTDGASLQRAAEQYQIPKTVLWRNVRKQLGARPPPAGPAGLRRKTYDEEKRRAAVRALEQGDNLTRVSHQYQIPKTTLFREKTRLVETGRLPWSCLKRRGPYLDCFKRSRLGEAVAACQDGRMSQAAASVTFQVPKTTIWRRLQERGGGSGHPGRRGGTLKVEAVDEDEPAPVQQFAFSQVGGHIPVTYVQGSEFGEASLIILDPGRIAVEGSGRVAAEPPSCLPVAPDVSRAGAQPVCLQVSQPVKLEGRSRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00189168;
- 90% Identity
- iTF_00189168;
- 80% Identity
- iTF_00189168;