Basic Information

Gene Symbol
osa
Assembly
GCA_032445375.1
Location
CM063654.1:13724279-13745293[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-26 2.7e-22 81.4 0.0 2 89 91 178 90 178 0.92

Sequence Information

Coding Sequence
ATGTCTCATGAGAGACAAGTGGCCCGGGATGAAATTCAGAATGGAGCGTTGCCGTTGCCACATTCCCCCACTCGCAGCAACCCGTGTGTGACCCCGCTGGTGATCGAGCCCCTGATAAGCCTCGTGGTAGACGAGTCGTCCGATCGATCACTAAGGCCGTCACTTCTACCTGCTGTTGCCGCTGCGGTTGAAAGGGCCTTGCGACACCGTTCCAAATACAGGAAGCCCGACAGCCTGGGGAAGCTGTACGACATGGACGACAGCCACGAGCGCCGCGCCTGGCTCGACAAGCTGCTGCAGTTCATGGACGAGCGCGGCACGCCCATCTCCGCCTGCCCCACCATCTCCAAGAACCCCCTCGACCTCTTTCGACTGTACCTGTACGTCAAGGAGAGAGGGGGATTCATGGAGGTATGCAAGGTGACCAAGAACAAGACGTGGAAGGACATCGCGGGCCTGCTGGGCATCGGGGCGTCGTCCAGCGCCGCCTACACGCTCCGCAAGCACTACACCAAGAACCTGCTGGCCTACGAGTGCCACTTCGACCGGGGCGGCATCGACCCGCAGCCGATCATCAACCAGGTGGAGGCCACTTCGAAAAAGAAAGGTGCCAAGGCTACTTCGGTGCCCTCTCCAGGCTCGTCCAACTCGCAGGACTCGTTCCCCGCGGCCGGCTCCAGCGGGGCGTCCATGGACGGCTACGGCTACGGCTACCCCGCGGGTGGCACCCCGGACTACGGCTCGCCGCCCACCATGCAGCGCCCCGCCGCGCAGACCAACGCCCCGTCTCCGCACTCGGGTGAGTCCGCCCGCTCGGCGCTCTCGAGCCGTGCCCGGAGGAGAAAACCCCCCCACCTTCATCGgtgggATGAAATGAGTagtgatgctcgctggtgctttacCCTCTAtctctccttccttccttcctccccAATTCCTTCTGTCTCTGAGAACCACCGCCTGGCAAAGCACTGCCTCTCGCCACGTACCTCGCTGACCGTTGGCTGCGGCGCCGCGGGTTCAGTATTGCACAGTGTGGCCATGCTGGGCTGTTAG
Protein Sequence
MSHERQVARDEIQNGALPLPHSPTRSNPCVTPLVIEPLISLVVDESSDRSLRPSLLPAVAAAVERALRHRSKYRKPDSLGKLYDMDDSHERRAWLDKLLQFMDERGTPISACPTISKNPLDLFRLYLYVKERGGFMEVCKVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEATSKKKGAKATSVPSPGSSNSQDSFPAAGSSGASMDGYGYGYPAGGTPDYGSPPTMQRPAAQTNAPSPHSGESARSALSSRARRRKPPHLHRWDEMSSDARWCFTLYLSFLPSSPIPSVSENHRLAKHCLSPRTSLTVGCGAAGSVLHSVAMLGC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-