Basic Information

Insect: Baccha elongata
Gene Symbol: -
Assembly: GCA_951217065.1
Location: OX578274.1:60362394-60370718[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.15 31 6.9 2.4 2 20 971 989 970 991 0.93

2 8 0.0011 0.23 13.6 0.7 1 23 998 1020 998 1020 0.99

3 8 0.0035 0.74 12.0 5.1 1 23 1024 1046 1024 1046 0.98

4 8 4e-08 8.5e-06 27.6 1.1 1 23 1052 1074 1052 1074 0.99

5 8 2.7e-05 0.0056 18.7 0.3 1 23 1080 1102 1080 1102 0.98

6 8 0.00014 0.029 16.4 0.7 1 23 1108 1130 1108 1130 0.98

7 8 0.0024 0.51 12.5 3.1 1 23 1136 1158 1136 1158 0.94

8 8 0.00012 0.025 16.7 0.9 1 23 1164 1186 1164 1186 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.15	31	6.9	2.4	2	20	971	989	970	991	0.93
2	8	0.0011	0.23	13.6	0.7	1	23	998	1020	998	1020	0.99
3	8	0.0035	0.74	12.0	5.1	1	23	1024	1046	1024	1046	0.98
4	8	4e-08	8.5e-06	27.6	1.1	1	23	1052	1074	1052	1074	0.99
5	8	2.7e-05	0.0056	18.7	0.3	1	23	1080	1102	1080	1102	0.98
6	8	0.00014	0.029	16.4	0.7	1	23	1108	1130	1108	1130	0.98
7	8	0.0024	0.51	12.5	3.1	1	23	1136	1158	1136	1158	0.94
8	8	0.00012	0.025	16.7	0.9	1	23	1164	1186	1164	1186	0.98

Sequence Information

Coding Sequence: ATGGGATTTCATAATATTGCAGAACATAATGTTTCGCAGGATATTTGCAGCTATACTATAGACAACCTGCTCAAAGATGCATTAAAAAGCAATAATATCGATAGTGTAGGAGCTCCTGTCGATCATATTGACCCATTAATGTCACTTAAATTAGAAATGATTAAAGAAAAAGATGAGTCGCCAGGTAATGATCATGATATGGAATACTTATCGGACTATTTGGATGAAGATGAACTATCAATAGAAAAAGTAATTCGCCGTAAGAAAATTGAAGGAATAATAGATGAATATAGAAAACATCCAGTTTTGTGGGACCCAGCAATGGCTAGAGGAAGCACTAAAGCTGAAAAGAAGATTCATTTAAGAATTATTAGAAAAGTGGTTAATACTAAGTACAAGATGAATCTATCATACAAAGATCTGCAACTGCAAATTCTTGCCTTAAGGCAAGTATACAAAAGAGTTCTTACGAGAAAGCAGAGTTTCGAAAAATTCTTTACTGATGGAAGTCAAAAATTTAATCCAAAGTTGTGGTATTTTGAGAAGCTATCATTTATTCAGGGTTGTAATGATGACATTGATgttGAATTGCCGTCCATAGACGAAACTGGTATAATAACGAAACAAGAACCTTCGGACTGTGAGtcttCTGATTCTGGGGATAAAGAACcatcaatatttataaaaaaaccagAACGAGATAGTTGCAAGATATTGAGTGATCCACCAATAATATCGGATCTCATTGCTCAATACAAACAGTATCCATTTTTATGGGATCAGACTGCACCCTTATATAATAGCAAATACGCAAGAAAGGATGCTTTTCGCAAAATTACAGCAttcattaataaaaagtttaacaaaaatgttacagACAGAAATGTTAGGCAACAAATTGTAAACCTTCGCAGTGGATACAGAAGAGTGCAACGAAAAAAACATGATGACACATATCGCATTAGTTTGTGGTATTTTGACGAGTTATCATTTATTGATAGGAAAGCGAATGATGAAGAAAATAGCGTGattcCAGAAGTGGTAGAAATTCCAGAAAACACAAATGATCAGAGCAATATGATGTTTGGAAATCAACCTTACGATAACGAAAACGATGACAGTAAAGGAGAAACAGGTCCTCAAAGCAGGGAGACGGAAATAGTTTTAGCTATTATTGAGGAATACAGAGAACATCCCTGTTTGTACAACAACTTGCAATATAAGACCAAATGTCGTTTCAGCCGGGGTGATGCTATTACAGAAATCAGAACaactattaataataaattcgaTACAACATACAGCGATGTAGAAATTAAAGCTAAAATTGCTCAACTCAGAAGTAGTTACAGGCGCATTCTGCGCACCAAAGAAGGATTCGAAAAGCTTCATGCTAATGCTAATAGGAAATTTCATCCCCAATGGAggtattttgataaattgtcATTTATCGGTACAAAGGACAGTGATTTTTCTGTGAGACGTATGAAGAACcgaaagtcgaaaaaagtacaaaacgAAGAACAAGAACGCAAATCCGACagaataaagaacaaaaaagataaagatGAGAAGATTGAagatgatgacgacgacgaaGAGGAAGACAaggatgatgatgaagatgaagaagaggaagaagatgatgaagaagatGAGGAAGACGAACCATTACAACATGATGATCATATGTCTGTTGGCAGTGAAGTCGAATCAAACGAAAATCGTCTTAAAATGGAATCGCCACCTATGGACGAAGAACAATCCATAAAGTTTGAACAGCTGTCTGAGAATGGCGAGGAAGAAAGACGTAATCCTAAATCAATCGTCAAAGACAGAGCGCTTCTAACGGGTGTTATAGAGGAGTATAAAAAGTTACCCTGCCTATGGGCTGTTCAACACTACACAAATGATAACACTTACCGTAGAGAGGCTTACGAAGAAATGGCCAAGAATATCAATGCTCAATTTAATACAGCATTCAATTACAAGGATATGAGTTGTGAAATTGTTAAACTACGTGCTACATATAAGCGTATGTTGAAAAAGAAACAAGAGGATCCAACATTTGAACCAAAGCTCTGGTATGCTGATAAATTAGCGTTTATTGAAGGAAAAACAGACGACTCAACATACAATGGTCAAGTGCAAGGATACTCATTAATTAACAATGAAAACAATGATGATGCTGCATCTGATGAAGACGGTATGGAAGATaaaaatgatGTCTTCGATATCATCGACCTTTATAAAACACAACCAATCTTATGGGACACCAAACACCCTTTGCATTTGTTACGAACAGAGCGAAGAAAAGCAATAGCAAAAATATGTGCAACACTTGCTCTTGAGCACAACTGTCATCTAACAATTGAAGAATATCGTTATCAAGTTCGTTTTCTAAGAGATTCGTATTTTAGAGCGTTGCGACATGAAGCTGCCGCAAAAATTGGTGACATCGGAAGTTCTTATATACCaaaaccatttttctttgatCGATTGTCATTTTTGGAACCCTTTGCTGAAAAAACGCCAATTCCTGTAGCGCTTTTACAGCTTGCCGATATAGCAGAGCCCCAAGAAGATTTTACCTACCTGGTTGAAAATAGGCCTTTGATGATGGATTTTATAGATGTTTATAAAGCACATGGTTGTCTTTGGGACACAAAGAACATCGACAAGGCTAGCCTAGCAGCACATTCTGATGCCTACGATAAGATTATAAATACGTTTTTGAAACACGATGTTATATTAACCAAGGAACAAGTTTTAACTGCAATAAGATATCTCCACTATTGTTTGACGAAACAGCAAAAATTAATCGAACAGAACTCCACAGCAAGCGAACCACCAGTTTGGTTTTATGAACACCTGGAGTTCCTTGGGAAAGTTCCACAAAGAAGAGACAAATACTGTTCTCATTGTGACCAACATTTCCATACATTGGCAGCGTATGAGAAACATAAGATAGAAATCGCCGGAGACTACCCTTACAGATGTTCTGTATGCAAAGCAGGTTTTGTTTCACGTTCAAAATATGCCTATCATCAAATTACCCACAAAGAACCTCATAAATGCGAACAATGTGGATTCCAAGCTTACGATAAACACAATTTCAATGTCCACATGCGTCGTCACAAGGGTATACATCCCTTCAAATGTCAAGAATGCGACAAAGGATTTGTAACATCGACGGAATTAAATCGCCACATGCGAATGCATACGGGTGAGCGACCTTTCATATGCGATATATGTGGAAAATCCTTACCAGCGAATTCTGAATTCCGTCAGCATATGAAAAGACATAGTAATCAAAGAGATCACAAGTGTGACCTTTGCGATGCTGCATTCTTTACGCCTAAAACACTGCGCGACCATATGGCATCACATTCAAATGAACGTCAACACATATGTGAAACATGCGGTGCAGCTTTTAAGCGGAAAAAGACTCTTCATCAGCATAAGGCATTACACGCTGAGAAGAAAAAACACGAGTGCAAGATTTGTGGGAAGCTTTTTGCACAAAAAGCAGGAGTTTATTCACATATGAAATCACACGGGTTAATGGCTGggagttaa
Protein Sequence: MGFHNIAEHNVSQDICSYTIDNLLKDALKSNNIDSVGAPVDHIDPLMSLKLEMIKEKDESPGNDHDMEYLSDYLDEDELSIEKVIRRKKIEGIIDEYRKHPVLWDPAMARGSTKAEKKIHLRIIRKVVNTKYKMNLSYKDLQLQILALRQVYKRVLTRKQSFEKFFTDGSQKFNPKLWYFEKLSFIQGCNDDIDVELPSIDETGIITKQEPSDCESSDSGDKEPSIFIKKPERDSCKILSDPPIISDLIAQYKQYPFLWDQTAPLYNSKYARKDAFRKITAFINKKFNKNVTDRNVRQQIVNLRSGYRRVQRKKHDDTYRISLWYFDELSFIDRKANDEENSVIPEVVEIPENTNDQSNMMFGNQPYDNENDDSKGETGPQSRETEIVLAIIEEYREHPCLYNNLQYKTKCRFSRGDAITEIRTTINNKFDTTYSDVEIKAKIAQLRSSYRRILRTKEGFEKLHANANRKFHPQWRYFDKLSFIGTKDSDFSVRRMKNRKSKKVQNEEQERKSDRIKNKKDKDEKIEDDDDDEEEDKDDDEDEEEEEDDEEDEEDEPLQHDDHMSVGSEVESNENRLKMESPPMDEEQSIKFEQLSENGEEERRNPKSIVKDRALLTGVIEEYKKLPCLWAVQHYTNDNTYRREAYEEMAKNINAQFNTAFNYKDMSCEIVKLRATYKRMLKKKQEDPTFEPKLWYADKLAFIEGKTDDSTYNGQVQGYSLINNENNDDAASDEDGMEDKNDVFDIIDLYKTQPILWDTKHPLHLLRTERRKAIAKICATLALEHNCHLTIEEYRYQVRFLRDSYFRALRHEAAAKIGDIGSSYIPKPFFFDRLSFLEPFAEKTPIPVALLQLADIAEPQEDFTYLVENRPLMMDFIDVYKAHGCLWDTKNIDKASLAAHSDAYDKIINTFLKHDVILTKEQVLTAIRYLHYCLTKQQKLIEQNSTASEPPVWFYEHLEFLGKVPQRRDKYCSHCDQHFHTLAAYEKHKIEIAGDYPYRCSVCKAGFVSRSKYAYHQITHKEPHKCEQCGFQAYDKHNFNVHMRRHKGIHPFKCQECDKGFVTSTELNRHMRMHTGERPFICDICGKSLPANSEFRQHMKRHSNQRDHKCDLCDAAFFTPKTLRDHMASHSNERQHICETCGAAFKRKKTLHQHKALHAEKKKHECKICGKLFAQKAGVYSHMKSHGLMAGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -