Belo045512.1
Basic Information
- Insect
- Baccha elongata
- Gene Symbol
- -
- Assembly
- GCA_951217065.1
- Location
- OX578273.1:74687045-74692278[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.079 17 7.8 4.2 1 23 1178 1201 1178 1201 0.97 2 12 0.00028 0.059 15.5 5.3 2 23 1360 1381 1360 1381 0.97 3 12 0.00012 0.025 16.7 0.3 3 23 1389 1409 1387 1409 0.98 4 12 1.7e-07 3.5e-05 25.6 3.6 2 23 1416 1437 1415 1437 0.97 5 12 3 6.3e+02 2.8 0.1 5 23 1450 1468 1448 1468 0.96 6 12 0.0087 1.8 10.8 3.4 3 23 1475 1496 1473 1496 0.95 7 12 0.16 33 6.8 0.1 2 23 1507 1527 1506 1527 0.96 8 12 0.00022 0.046 15.8 0.8 1 19 1533 1551 1533 1552 0.96 9 12 0.00014 0.03 16.4 0.4 1 23 1563 1585 1563 1585 0.98 10 12 0.00024 0.051 15.7 9.0 1 23 1591 1613 1591 1614 0.96 11 12 0.0013 0.27 13.4 4.7 1 23 1619 1641 1619 1641 0.98 12 12 0.0016 0.33 13.1 6.0 1 23 1647 1669 1647 1670 0.96
Sequence Information
- Coding Sequence
- atGGGTGGAAACGTACAATGTCCCGTATGTACACTTTTCCTGCTTCCGGGCATGGATTTGTCTGATCATCTGGAAACACACCCGAAAGAGCAGGTGATAAAAGCGTTGGTTCAAATGAGCCTTAAATCTGAGACATCTGAAACGCCAGCAACACCAGATACTCctaaaaaacaaagcaaaaactcTCACCCAGAACCCGATGAAGTTTCTCATCAAGTcacagaagaagaaaaaaattcccCACTACCAGAGACGATTGGAAGTGCAAATGATAGTTCACCTGTTGTGAAACCAGCTACCACAAAAAGAATTGAAGCAGATGGAAATCATGCATTACTATCAGCAGTTTCGCCTTCAAGTGTTTTACCAAATAGACAAGgtggatatatttttgaaaataacagtAGCAGCAGTAACGGTAGCGGTAACATAAGTAATTTCTTTGGACCACCGACTACGCCATATTATCACCATCAACAACATAATCATCATCCTCAGCATCAACAAAATGAACAACATCgtcaagaacaagaacaacatCGTCAACAACATgaacaacaacatcatcatcaacTTCAACAACTACACCATCAACAGCAAGAACAACATATTCATAATAATTACCAATCTTATCATGGTCTCCCTCACGGTGGAAATAACTCCTTAATTGGACATGGGCCAACACAGCCTCCACTAAGACTCTTCTCCTACCAACCACCACCCAAACCATTGCAACCACCACCTGCATATGGTGCCGCCATTAGTCAACTTAGATCTCAAAATAGCCAAAATCTGATGTCAAATACCATTCATCGGCCGCTGTATTCTCCAGGAAACTACACTCTACCAGCATCGACATCCACAGAAACATCTGCTTCATCAACACCATCACGTTTACCGCCTCCACTTCCACCACCACCGCTAAATCAACGGTATCAGTCGAATTTTGAGTCCATGGAAACGTCTTTTACTGATACAAATGATACAAACTCAATGTCTCCAATGCGAAATACGTTGACACCACCAATAAGACCTCCTCCACATTTGTATCGTTCACCGCAATCGTCATCAAATGGTTTATTCTGTAGACAGTCAAATTCTCCCTACTCAGTTATGTCAGGGTCTCCGTCTGTTTTGCGATTTGCTGAATCACCAGTAACAGCACATTATCTAGAGCGCGAGAATGGAGATTTTATTGTGCAAGAAACACCCAAACATGTTGTGGAATGTGTTGAAAAAGATGATGGAGAGTTTTCTGTTATTGAACGAGTCTATCATATGCCACCGAGTGTTGTTCAAATtaatgaagatgaagaagatgaaTTGTCGGAACATGAATCCAATAGTGAGGATGTTAAACTGATTGAGGATGATCCCCCAAGTGAAACTTGGTCCAGTGTTGGAGGATCATCGCAAGAAATGCAAACGGAGAGaaggcaacaacaacaacagaagaaATCTGGCATTACTGTTCTCAGTGATGTACAATTAGACTTAAGCGAATACCTAGACTTAGTGGGAAATATTATAGCTTCTGGAAAGGTGGCTAAACATCGGAGCGaattaatcaaaattgaaaaattcgaaCCGGATGAAGTAAAAGAAGAAGATTCATTATGTCTTGATGAAGACGAAAACTATGAAACTTTGATGAACAATGACCATGAAATGAAAATCGTAGAGACTGAAAATCAGaagcaacaaataaataatgagTCAACGCATTGTCCTTTTTCACAGGCGGAACCATCTGCATCGTCATCATCAGTAGCTCCTGGGACAACAAGTGTTATTCGATTGGCTGCTACTGTTAATGTAAAAAGCAGTACACctttaataatttcaacaaaaattgaagaacCTATTCAGGAAGAATTCTCTGAAACACTTACAACGACAAAGATCGAGGAAACAAAGGAGATAACTAAGGCTGACGATGAAGAGGAGCAATCGACTAGCCTTAAGATAGAAATAGACGCAACAAGCAATAGTACACTTTCGGATATGGAATTAGATGGAACTAGCACACCAACAAACAAgactaaagaaaaaataaaagcatcAAATTTAGATGATTCAGTACCACAACCTAAACTAGATGACATTTCCACACATCCAATAGAGACCCTAGAAAAACCAGCaatcaaagaaaatactttacCGTATAATACTTTCAATTCAACAATGAAACggcaaattaaaaaagttcCGAAAAAGCTTATTATTAAGCCAAAAAGCAAAGGTGCTAGTACGTCTCAAGGTATAACCGAAAAGATGCAAACTTCAATTACTGATCAAACGCCACCAATACCAATTCAGATGCCAATGCCAATACCAATACCATCTACCTCGACTGAAACTCCCGAAATACAACAAGAGCAAAAGGAAGAAGATACATCTGAAGATTTCGCACAACGAGATGAACTGAATAGTATTAAAATAGAAAGTGTATCTTCGAATACGTCGCCGGACTCAGTTCTTTTAAAGCCTCTCTTAGCTGACGCTGATGAAAAGCTTCCACCTGAAGATGATGGATCACCTCAACCATCAACATCAAGATCCATTATTTCAGAGGAAAAACTATGCACAGAAGAACTGACTTTGGAAGAGGAAAAACCCACCGCCGACTTAACAGCATTCATTGACGAATGcatgaaaaaagaagaagaagaagaacatccTATACATTCAATATTTGGAATGGAAATCAGAACTAACGAGGAAACACTAAACAATGCACTGACTCCACCACCACCGAATCCTGAATTCCCATCTCCCTCTTTGTTCGCTAAGCCATTGAATACTACATCTGATAATCTATCGATACCAGAATCTATGCTTCTCGATGGCAGTAACTTACATGAACCAGATGAACACCAACTCcatcagcagcaacaacatcatcaAAACAGCTCTAATTATGTTGAATATCCGTTTAGTTTCCTTTATGGCAGTGAGACGAATCACCAAGATGAGGAAGAAAAACACAATATTCCGGCACCTATTTATTGCACTGAGGACTTTAACAAATACAGTGCAAGTACGAGTGGAGGCAACAGCGCAAGTTGCACATGGTATCAGTCACAAAGTAGTGAAAACGATTTTGAAATGGATGGAAAGGGTAGTTACCTGGATTTAGATTCGTGTAAGCGAAGTAACTCGTTTGCAGCAGCCACTGAGGGTAGCATGCCGACTTCAGATGCGCTGAACATAAGAACAGATGAAAAGATGCCAGCAAAAGGTGAGATCTCAGAACAAGAGAGCAATTGTGGGGTGGAGAATTCATGGAGTCAACCGcTTTACAACGAGTTTGCTGTTCGTTTCCCAAATccttatcaaaattttatgtcaaaTCACGAGAGCTGGAGCCAAGATCATTACTTTCGTCCTCAGGATTTGAGTTCATCTgttgaaacaaaaaatttcCCTTTGCGATTTACGGAAGAACCATCACCAGTCATTGACACCCTACCATCCACATCAAAACGAAAGAACAAAGTGACGACCACAAAAGTGCATCGCAAAAAGAACTTTCAATGTACTCACTGCAACACACACTTTCCATTGCTTAAAGAGAAAAACGCACATATGATAAAACAACACGGATATAAGCGTGTAAACCGTCGACTTATACGTGACCCACCGACTTCAACTGTAACTACAGCTACACTGAATGCAATCGACCCCGCTGGAGCTACTTCTCTGATCCTTGGCTTGGAGCCTGTACCACCTTTTGCAGTTGGTGACGATGAAGATTCAAAAGCAGCAATTGTTAAAATAGAACAAGAAAACCAAGATTGCAAAGACAAAAACCTATCTAATCTGGAAATAAGCAGCACGAAAGTTTCATCCTCGGCAACCAGTGCAACAACTGTATCGCGCACTAAGTTTGACTCGATGCGGGCACGAGACAATCGTATGCTTATCAATTTCAATTTGAGTGCGTTGAATGTAAAAAATGAAAGCGATGTGCACAACTATTACTTGGAATCTAAATCGTCATTTTGCTGTTTCGTTTGCAAGCGGGACTTTCTTACCGTTAAGCTATTTGACGAGCATTTAGTTGAGCATCCCGCCGAATGTTTTACATGCCACAAAAAATTCACTCGATGGAAAAACTTTATGGTTCATCTTAAGCGGCATTTGGGATGGAAAGATTTTGGGTGCACTTATTGTGAAAAGAAGTTTGTAATACGTAGCGCTCTAGTTGAACACATGCGAATGCACACCGGTCATACACCACTCAAATGTAAAATATGTGGAAAGAGTTTTAAGCGTTACTCCAATTTAACACAGCATCGCAAACGGCACGGCACCAAAATCAATCGTTCCAAAGAGTACGTTTGTTATTGTGGTGAAGTATTGCCGTCAAAAGCTCGCTTTATCTGGCATAAAGAAACGCACGATTTAAAGCCAAAATGCTGCCCCTACTGCAGAGATAGGTTTGTACATGCCAACAGTTTGCGACGGCATATAAGACTGGCTCACTCGGACAAGTTTGACTACACCGAACCGATGGAGTGCCCCATGTGTAAGCAAATCTATGCTAAATCCAGCATCAAGGCACACATGGCAACGCACTCAATGGACACGCAGCACGAGTGCCTAATTTGTAGCAAATCATTCAGCACGAAGTGGAATCTAAAGATACACAATTGGGTGCACGCCAACCGTACAACAAAGCCCTTTAAATGTGAGCAGTGTGTTAAGGCGTTTGTGCGCGAAGTCGACTACAACAATCATATAAATTCGCACAAGCAAATCAAGCCCTACACTTGCGAACACTGCGGCTGCAAGTTCATACGCAAATACAACTACATCCGACACAGGCGCGAGCACCACGGAAACAAGAAGTTCACCTGTGATCTTTGCGGCAAACTCTTCCACCGGCACTACTATCTGATCGAGCATCGGCGCATCCATACTGGTGAACGGCCGTTCCAGTGTACGATATGTGGCAAAAGCTCTACCACAAAAACCAAccataacaaacatttaaagaTTCATCATTCAAGAGATCCGTTCACCTCGGAGGCGTaa
- Protein Sequence
- MGGNVQCPVCTLFLLPGMDLSDHLETHPKEQVIKALVQMSLKSETSETPATPDTPKKQSKNSHPEPDEVSHQVTEEEKNSPLPETIGSANDSSPVVKPATTKRIEADGNHALLSAVSPSSVLPNRQGGYIFENNSSSSNGSGNISNFFGPPTTPYYHHQQHNHHPQHQQNEQHRQEQEQHRQQHEQQHHHQLQQLHHQQQEQHIHNNYQSYHGLPHGGNNSLIGHGPTQPPLRLFSYQPPPKPLQPPPAYGAAISQLRSQNSQNLMSNTIHRPLYSPGNYTLPASTSTETSASSTPSRLPPPLPPPPLNQRYQSNFESMETSFTDTNDTNSMSPMRNTLTPPIRPPPHLYRSPQSSSNGLFCRQSNSPYSVMSGSPSVLRFAESPVTAHYLERENGDFIVQETPKHVVECVEKDDGEFSVIERVYHMPPSVVQINEDEEDELSEHESNSEDVKLIEDDPPSETWSSVGGSSQEMQTERRQQQQQKKSGITVLSDVQLDLSEYLDLVGNIIASGKVAKHRSELIKIEKFEPDEVKEEDSLCLDEDENYETLMNNDHEMKIVETENQKQQINNESTHCPFSQAEPSASSSSVAPGTTSVIRLAATVNVKSSTPLIISTKIEEPIQEEFSETLTTTKIEETKEITKADDEEEQSTSLKIEIDATSNSTLSDMELDGTSTPTNKTKEKIKASNLDDSVPQPKLDDISTHPIETLEKPAIKENTLPYNTFNSTMKRQIKKVPKKLIIKPKSKGASTSQGITEKMQTSITDQTPPIPIQMPMPIPIPSTSTETPEIQQEQKEEDTSEDFAQRDELNSIKIESVSSNTSPDSVLLKPLLADADEKLPPEDDGSPQPSTSRSIISEEKLCTEELTLEEEKPTADLTAFIDECMKKEEEEEHPIHSIFGMEIRTNEETLNNALTPPPPNPEFPSPSLFAKPLNTTSDNLSIPESMLLDGSNLHEPDEHQLHQQQQHHQNSSNYVEYPFSFLYGSETNHQDEEEKHNIPAPIYCTEDFNKYSASTSGGNSASCTWYQSQSSENDFEMDGKGSYLDLDSCKRSNSFAAATEGSMPTSDALNIRTDEKMPAKGEISEQESNCGVENSWSQPLYNEFAVRFPNPYQNFMSNHESWSQDHYFRPQDLSSSVETKNFPLRFTEEPSPVIDTLPSTSKRKNKVTTTKVHRKKNFQCTHCNTHFPLLKEKNAHMIKQHGYKRVNRRLIRDPPTSTVTTATLNAIDPAGATSLILGLEPVPPFAVGDDEDSKAAIVKIEQENQDCKDKNLSNLEISSTKVSSSATSATTVSRTKFDSMRARDNRMLINFNLSALNVKNESDVHNYYLESKSSFCCFVCKRDFLTVKLFDEHLVEHPAECFTCHKKFTRWKNFMVHLKRHLGWKDFGCTYCEKKFVIRSALVEHMRMHTGHTPLKCKICGKSFKRYSNLTQHRKRHGTKINRSKEYVCYCGEVLPSKARFIWHKETHDLKPKCCPYCRDRFVHANSLRRHIRLAHSDKFDYTEPMECPMCKQIYAKSSIKAHMATHSMDTQHECLICSKSFSTKWNLKIHNWVHANRTTKPFKCEQCVKAFVREVDYNNHINSHKQIKPYTCEHCGCKFIRKYNYIRHRREHHGNKKFTCDLCGKLFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHLKIHHSRDPFTSEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -