Basic Information

Insect: Baccha elongata
Gene Symbol: -
Assembly: GCA_951217065.1
Location: OX578272.1:118917080-118936286[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 1.8 3.8e+02 3.5 0.8 2 23 231 253 230 253 0.94

2 24 0.3 64 5.9 0.2 6 23 262 279 262 279 0.97

3 24 0.013 2.8 10.2 1.7 1 23 285 307 285 307 0.97

4 24 1.2e-05 0.0025 19.8 2.2 1 23 313 335 313 335 0.99

5 24 0.00036 0.077 15.1 0.6 1 23 341 364 341 364 0.93

6 24 0.0029 0.62 12.3 0.2 3 23 372 392 371 392 0.95

7 24 0.00058 0.12 14.5 0.1 2 23 401 423 400 423 0.96

8 24 0.02 4.2 9.6 0.4 1 23 430 453 430 453 0.89

9 24 0.0058 1.2 11.3 0.2 1 16 459 474 459 475 0.87

10 24 1.6 3.3e+02 3.7 0.2 2 23 665 687 664 687 0.92

11 24 0.081 17 7.7 2.1 1 23 719 741 719 741 0.98

12 24 7e-05 0.015 17.4 0.8 1 23 747 770 747 770 0.93

13 24 0.0011 0.23 13.6 1.9 1 23 776 799 776 799 0.93

14 24 0.00081 0.17 14.0 1.0 3 23 807 827 806 827 0.97

15 24 0.045 9.5 8.5 5.8 1 23 835 858 835 858 0.95

16 24 0.0016 0.34 13.1 0.6 1 23 867 890 867 890 0.95

17 24 0.0043 0.91 11.7 0.4 1 17 896 912 896 912 0.92

18 24 0.012 2.5 10.4 0.6 2 23 1109 1131 1108 1131 0.96

19 24 0.86 1.8e+02 4.5 0.5 6 23 1140 1157 1140 1157 0.97

20 24 7.6e-05 0.016 17.3 3.0 1 23 1163 1185 1163 1185 0.98

21 24 7.2e-05 0.015 17.3 4.3 1 23 1192 1214 1192 1214 0.98

22 24 0.00011 0.023 16.8 1.6 3 23 1223 1244 1221 1244 0.96

23 24 0.026 5.4 9.3 0.6 2 23 1253 1275 1252 1275 0.96

24 24 0.00093 0.2 13.8 0.1 3 23 1284 1305 1283 1305 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	1.8	3.8e+02	3.5	0.8	2	23	231	253	230	253	0.94
2	24	0.3	64	5.9	0.2	6	23	262	279	262	279	0.97
3	24	0.013	2.8	10.2	1.7	1	23	285	307	285	307	0.97
4	24	1.2e-05	0.0025	19.8	2.2	1	23	313	335	313	335	0.99
5	24	0.00036	0.077	15.1	0.6	1	23	341	364	341	364	0.93
6	24	0.0029	0.62	12.3	0.2	3	23	372	392	371	392	0.95
7	24	0.00058	0.12	14.5	0.1	2	23	401	423	400	423	0.96
8	24	0.02	4.2	9.6	0.4	1	23	430	453	430	453	0.89
9	24	0.0058	1.2	11.3	0.2	1	16	459	474	459	475	0.87
10	24	1.6	3.3e+02	3.7	0.2	2	23	665	687	664	687	0.92
11	24	0.081	17	7.7	2.1	1	23	719	741	719	741	0.98
12	24	7e-05	0.015	17.4	0.8	1	23	747	770	747	770	0.93
13	24	0.0011	0.23	13.6	1.9	1	23	776	799	776	799	0.93
14	24	0.00081	0.17	14.0	1.0	3	23	807	827	806	827	0.97
15	24	0.045	9.5	8.5	5.8	1	23	835	858	835	858	0.95
16	24	0.0016	0.34	13.1	0.6	1	23	867	890	867	890	0.95
17	24	0.0043	0.91	11.7	0.4	1	17	896	912	896	912	0.92
18	24	0.012	2.5	10.4	0.6	2	23	1109	1131	1108	1131	0.96
19	24	0.86	1.8e+02	4.5	0.5	6	23	1140	1157	1140	1157	0.97
20	24	7.6e-05	0.016	17.3	3.0	1	23	1163	1185	1163	1185	0.98
21	24	7.2e-05	0.015	17.3	4.3	1	23	1192	1214	1192	1214	0.98
22	24	0.00011	0.023	16.8	1.6	3	23	1223	1244	1221	1244	0.96
23	24	0.026	5.4	9.3	0.6	2	23	1253	1275	1252	1275	0.96
24	24	0.00093	0.2	13.8	0.1	3	23	1284	1305	1283	1305	0.96

Sequence Information

Coding Sequence: atggaGTGCATTTTATGTTTAGAAAAACCAAATGAATCAATTGATTTATTCGGGGAAACTGGAACTCGTCTTGAAATCGTAACCATCATATCTAAACACTTTTGGCTTGAgccaaaaaaagaagattatttGAATTCTACTGTAATATGCTTACCATGCTGGACATCATTAGAAtcatttcataaattttacGGAGACGTAGAGAAAGCCCATTTTtcctatgaaaaaataaaagctatggtgatagaaaatgatgaagttgaagaagaagaagccaATTCAAGTGATTATCGTTTAGATGATTTGAACGACATCCTGTATCCAGGCATTAAAGTTGAGCTCAATGAAGAATCTAATAGTGAACGAGTTGAACAAAAAACCGAAGACGAAAATATGAAATGTCCAATAAATATCTTAgtaaaattagataaaattgATTTCGAAGCAGACGAAGAGTTTTCTGATTCAGAAATTCCCCTATCCAAGTTAACCAAGCAAATTCAGAAAGAGAAGACCATTCATAAAGCTAATTCTAGTCCCAAATCGATTGAGGAAGGTAAAAAtactgaagaagaaaaaagtcaCATCTTGAATGGCAAATGGCTTGCGAAATGCTTTGCCGAAGAAACCACTATAAAACCAATAAGTCACAAAGAGTTAGATATGTTTATTAAACTTAACATGGATCTAACGTGCGAAAGATGTCGGATTCCAATGACAGATTTTTCCAGTCTTCAGGAACATTTCAAAAAGATGCATTTTGGAAAAGCGTTTGTTACTTGTTGTGACAAAAAGTTTACTCTACGTAGTCGGTTAGTTGATCACATTTTAGGACATAAACTACCTGAGTATTTTTCATGTGTTGTGTGCTCCAAAGTCTTGTCTTGTCGACAAAACTTGAGAAAACATATGATTGTACATGATAAGAAATACGTTTTCCAATGCGAAAAATGTGAGAAGATGTTCTATCGCAAACAGCTGCTTGATCGTCACATGGACACTCACGTGTTGgatcgaaaatttaaatgtgATGAATGTGATAAACTTTTTACATCAAAATTTTCTCTGGGGCAACACATCTATGGTGTTCATAAAGGtggttataaaaaaatttgtgaacAATGTGGCAAAGTTTCTCGTGATCAAGAAGCTTTTGTTCGTCATAAACTGGAGCACACAAATCAACCAAAACCATTTGTAGAATGCCCCAAGTGTGGCATCAAGCTTGTTGATAAAAATGGCTTACGAAAACATCTTCAAATGCAACATCCAGATGATCCAAGTGAACACATTTGCAATGATTGTGGAATTGTAACTAATTCAATTTTTGCATTAAGACGACATGTAACATTTATGCATAAAAGAAAACGTGACCATAAATGCCCGATGTGTGACAAAGCATTTAAAAGAGCTCTAACGTTAAAGCCAAGTGAGAaccatataaatttaaatttagtatgctGTCCGTGCtggaaatcattgcaatcattTCATAAATTCTACGAAAGCATAGAAATAGCACATTGCTCGCTTGGTGAAATAAAACGAGATTATGATGATAATTTGCATATAGAAGCAAATTCAATTGATTATCGTTTTGATGAAAATAACGTCTTGTATCCAGGCATtaaaaacgaatataaaaatgaatCCAACGCCAAGGAAACGGAGTTAGACACAAAGGATAACGTGAGTTATCCACAAGAAGATGAGATTAAAAGTGACCAAGCTGATTTTTATACGGACAATCATTTTGATTCAGAACTTCTTCCTAATTTGACCAAAGAACTcaaagaagaagaggaagaaaatgaaGAATGTACTGATGTAGAATCTGAAATGAAATCAGTTGAGACAAGTAAAAACAGAGCGGATGTTGAAATTCACATCAAAGAAGGGAAATGGCTTGCCACTTGCTTTGGTGAGGAAACGACAACAAACTCAATAAAACATGAAGAATTGGATAAATTTATCAAACTGAATATAGAATTAACTTGCGAAATGTGTCGCATTCCGATGAAAGACTTCTCAACCCTCCAAGTCCACTTCAAAGAAGCCCATACTATAAAACCGTTCGTAACTTGTTgtgagaaaaaaattgaactgcGTTGTCGTTTAGTCGATCATATTTTGCTACATAAGCTACCCAACTACTTTACATGTGTTATCTGTTCAAGAGTCTTGTCCTGTCggttaaatttaagaaaacatatGACTGTTCATGATGAGAAACAAATTTACTCATGTGACAAATGCGAAAAGACTTTCTATCGAAAAGACGTGCTTAATCGGCATGTGCTGGATATACACACTTTGGGACGCTCATTTAAATGTGAGGAATGTGATAAGCTcttTGCTTCTAAATGTTCACTTTATACACACATCTACGGTGTACATAAAGGTCGGTATAAGAAAATTTGCGAACAATGTGGCAAAGTTTCGTGTGATCAAGAAACTTTTCTTCGCCATCAATTGATACATACAAATCAACCAAAACCACTATTTGACTGTCCCAAATGTAGTATCAAACTTTCATCTAAACACGGACTTCGCCATCACATTAAACATCAGCATCCAAATGCAGCAGACAACCGAGAACATGTTTGTAATGTATGTGGAACGATATCAAAAACAGAAGTGGGATTAAAAAGGCATATAAAATTTATGCACGTGTATAAACGTGATCACAAGTGCACGATGTGTGATAAAGCTTTTAAAAGAGCACAAACTTTGAAGCCAAATGCAGATGACAACAATGCCAAATTTATTTGCTGTTCATGTTGGAACGCACTAGAATCATTTCATATATTCTATCAAAGTATTGAAGAAGCCCATGACAAACTAACTGATTGCCTTAAACTCCAAAATGAAGAAAGTGGCCCTGAATCCAATAATTTCGAtatacttcaaaatattttccaacCAGTAAAACAAGAAGCTTCTGTAGACACCAAAGTCGAGCTAGTAGAAGTATcagaaattatattaattaaccCCACTGATGGGGTGGCTAATAAAGAAATAGAAACTCTTTCTTATGACTCGGAATCAGAAGTTCCTCTCGTTAAACTTAGTAATTATAAGGAGCCTGTAAATGatcaaaaaaatgaagaaactaaTGACAGTGAATTCGATTTGGATAACGTTTCCGCAGTACAAGACAACGAAGAGCACTCACAAAAAACCGAATCAGATTCTGATAGTGACTACAATGCAACTAAGAACAAAGCAAAGGTGAAAGTATCAGTGGCGCTTAatgagttaaataaaaaacgaattccATGTAAAGAATTTGATAGTTTTATCAAGAGAAACATGGAACTTGTATGTAATGTCTGTAACAAGAACCTTGAAAATTTTTTCGATCTTAAAGAACACTACAAAAAGGCACATAAACAAGACGGATATGTAACTTGCTGTGATATACAATTCGTCAGTCGATTTTCATTAGTACACCATTTGCTACTTCACCAAGATCCAGATTTATACAAGTGTAAAAAATGCGATCGAGTTTTGgccaacaaaaaaagttttaaaaatcataTGACATCACATGTTAACCAAGAACGCATTCATAAGTGCACGAATTGTAAGAAAAGTTTTTCCTCAATACCGAAAttggaaaaacatttaaaaactcaCAATAGATCACATATTGATCAAATATGTGAACAATGTGGTAAAGTTTTTCATAGCAGGCAGAGCTTGAGTGCGCATCAGAAGCGAGAGCACATGggatttgtaaaacaaaaagttcaatGTCAAAAGTGTGGGGCTTATTTGTCAGACTCATCAACATTACAATTTCATATGAGGTATCAACATCCAAAAACTGCAGTTGTCAATGCTTGTAAAATTTGTGGAAAGATATCGGCGACTGGATATGGATTAAAGCGGCATATGCAATACATGCATTCAATGGAACGTGTCCACAAATGTACAATTTGTGTGGATAAAGCATTCAAGACCGCACAGAGACTCAGGCCGAATGCAGAACCCATGTGTTCCAAATCTATTTGCTGTCCGTGTTGGAACAAAGTAGAATCATTccataaattttatcaaactaTTGAAGAAGCCCATTCCAAGCTTACTAATTGTCTTGAGATCACAAAAGAAAGAAGTGAACCTGAAGCGACAAATGCCGGTGCATTGTCTAACTTTTTCGAACCagTTGTTAAGCGAGAAAATTCTGAAGAAACTGAAGTTAGGGTGCCCGAAACAGCACAAAGTCCAAGTTACCATGCTTTTACTGCTGAAACAGAAAATAATGAAAGAAAAGATGCACCTAGTTCCAACTCTGAATCAGAACTCCCGCTGTTAAGGTTAAGAAATCAGAGAAAGTCTATTAAACCCCTTAAGTGTGAAGAAGAAACCAAAGGTAGTGAATTAGACTCTGATAAAGCTTCTACAACACAGGACAAAGACGAATATCCACAAGAAAAATCGTTTGAAACTACTCCGGACGATTCTGTTTACGTTCATTTGGCACTTTGA
Protein Sequence: MECILCLEKPNESIDLFGETGTRLEIVTIISKHFWLEPKKEDYLNSTVICLPCWTSLESFHKFYGDVEKAHFSYEKIKAMVIENDEVEEEEANSSDYRLDDLNDILYPGIKVELNEESNSERVEQKTEDENMKCPINILVKLDKIDFEADEEFSDSEIPLSKLTKQIQKEKTIHKANSSPKSIEEGKNTEEEKSHILNGKWLAKCFAEETTIKPISHKELDMFIKLNMDLTCERCRIPMTDFSSLQEHFKKMHFGKAFVTCCDKKFTLRSRLVDHILGHKLPEYFSCVVCSKVLSCRQNLRKHMIVHDKKYVFQCEKCEKMFYRKQLLDRHMDTHVLDRKFKCDECDKLFTSKFSLGQHIYGVHKGGYKKICEQCGKVSRDQEAFVRHKLEHTNQPKPFVECPKCGIKLVDKNGLRKHLQMQHPDDPSEHICNDCGIVTNSIFALRRHVTFMHKRKRDHKCPMCDKAFKRALTLKPSENHINLNLVCCPCWKSLQSFHKFYESIEIAHCSLGEIKRDYDDNLHIEANSIDYRFDENNVLYPGIKNEYKNESNAKETELDTKDNVSYPQEDEIKSDQADFYTDNHFDSELLPNLTKELKEEEEENEECTDVESEMKSVETSKNRADVEIHIKEGKWLATCFGEETTTNSIKHEELDKFIKLNIELTCEMCRIPMKDFSTLQVHFKEAHTIKPFVTCCEKKIELRCRLVDHILLHKLPNYFTCVICSRVLSCRLNLRKHMTVHDEKQIYSCDKCEKTFYRKDVLNRHVLDIHTLGRSFKCEECDKLFASKCSLYTHIYGVHKGRYKKICEQCGKVSCDQETFLRHQLIHTNQPKPLFDCPKCSIKLSSKHGLRHHIKHQHPNAADNREHVCNVCGTISKTEVGLKRHIKFMHVYKRDHKCTMCDKAFKRAQTLKPNADDNNAKFICCSCWNALESFHIFYQSIEEAHDKLTDCLKLQNEESGPESNNFDILQNIFQPVKQEASVDTKVELVEVSEIILINPTDGVANKEIETLSYDSESEVPLVKLSNYKEPVNDQKNEETNDSEFDLDNVSAVQDNEEHSQKTESDSDSDYNATKNKAKVKVSVALNELNKKRIPCKEFDSFIKRNMELVCNVCNKNLENFFDLKEHYKKAHKQDGYVTCCDIQFVSRFSLVHHLLLHQDPDLYKCKKCDRVLANKKSFKNHMTSHVNQERIHKCTNCKKSFSSIPKLEKHLKTHNRSHIDQICEQCGKVFHSRQSLSAHQKREHMGFVKQKVQCQKCGAYLSDSSTLQFHMRYQHPKTAVVNACKICGKISATGYGLKRHMQYMHSMERVHKCTICVDKAFKTAQRLRPNAEPMCSKSICCPCWNKVESFHKFYQTIEEAHSKLTNCLEITKERSEPEATNAGALSNFFEPVVKRENSEETEVRVPETAQSPSYHAFTAETENNERKDAPSSNSESELPLLRLRNQRKSIKPLKCEEETKGSELDSDKASTTQDKDEYPQEKSFETTPDDSVYVHLAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -