Basic Information

Gene Symbol
Camta1
Assembly
GCA_951217065.1
Location
OX578272.1:131589729-131610563[+]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.5e-45 2.1e-40 138.7 0.5 11 116 22 125 14 125 0.98
2 3 0.93 5.5e+04 -4.5 1.8 68 68 515 515 470 559 0.49
3 3 0.63 3.7e+04 -3.9 0.0 18 42 988 1011 982 1018 0.75

Sequence Information

Coding Sequence
ATGCATCACACCACACTTGGTTGCACATTTGGGGCTATAAGTTGGAAGATTGTGGGTGTTATTGAAATCGCAGCGATTCTTATCAGCTTTGACAAACACTCTGAGTGGCAGTCGAAGGAAGTCAAAACAAGacCAAAAAGTGGATCACTACTATTGTATTCAAGGAAAAAGGTCCGTTACCGAAGAGATGGATATTGCTGGAAAAAGAGAAAAGATGGAAAAACAACAAGAGAAGATCACATGAAACTTAAAGTTCAGGGAACCGAAtGCATCTATGGATGTTATGTCCATTCCGCAATTCTGCCAACATTCCATCGCAGGTGTTACTGGTTGCTACAGAATCCGGACATCGTGCTTGTTCACTACCTCAATGTTCCTTATCCAGATGATAATAAGATGGCTGTCATAGCACCCAGTTTGACACTATGGGGTGATAAAAAAGAATGGACAAAAGAAGAACTGGTTAGTCAATTGAAACCAATGcTTTCAACGGTGTTCAGTGATGAGGATTCAGATTCTGGAAATGATATTGAAATATCCaaTGCTGAAACTGTTGAATCAATAGTTAGTCAATTAATGGAGAAACAACGATTAGCAAGGCAAGCTGCACTAGTCAAACAACTTGAATGTGGATGCCCTGATTCAACTTGTGCTGATGGTAAATCCTGCTCGCATCCAATGCGACGGATTGGCATCATGAAATCTCTGGCTGATAAACGAAATGATGCATACAATCAAGTGACTAGTACGACGCCAAATGTCCTGATAGGAGCAAAACTCTATTCACGCTGGCCAGATAGAAAGACTCGTCTTGAAATGGTAACTGCCGAAGCAGCAGAACATCATGAACGTCAAAAtggagaaattaaatttcaagtGATACCATCCCATAtggagcaacaacaacaacaacaacatcagcaacaacagcaatttAACATAACTCGCCACACACAAATGTTTGCTGGTCGTAATAATTTAATAGCAACCCCATCACAAGGCCCAGGAGGAGGAGGAGGTGTTAGTGTGAATGTAAATGTTAACACTTCTAATACCAATGCCGGTAACTTCAATCAACAGACCTTCGCCAATGCGTCTAATCAAAACaatcaaatgaatttaaatCGCAATAACATGAATCAGATAATaatcaaccaacaacaacagcaaagtCACCTGGCGGGAGTGGGTAACAATATAATTGCCACCACAACGACGGTGACCACATTTTCTGGTTCTGGTGCTGGGGCCACCTCTGCCACCCACAATGCtagtcaaaataataataataataacaacaacaatgcaACAACaaaccagcagcagcagcaattATCGGTTTTGTCGCCTCAGCAAATTAGTTTGCAAAACTCCAATGAACGAAATGAATTAAATAGTAATAACTCCATAAATCCCAGCCAGGGTCACATACAACACCAGCAGCAACCATcccaacagcagcagcaacttCAGCTTCAACATCATCtccaccaacaccaacaccaccagcagcagcagcagcagcaggcacaaaaacaacaaaacaatgatTTAAATACTTCATTAGGAGGAAACCCATCCTCGTCATCTCAAACTGAGCACCATTCATTCAAGCAACAgcaccagcaacaacaacaccaccaacagcaccagcagcagcatcatcatcatcatcttcttcGTGCCTCTTTGGCATCGACGACACCGTCAATCACAACCATTTCAGGCGTAGCAGCAGCATCCACATCAACCCATTCGACTAAAAGTCAGCAACACCCTAACTCTCATCCCCATCACCAGCAATTGGAACAGCAACAGAGCCAGCAACACCAACATCATCCCCATCACATTCACCATCCTtcgcagcagcagcaacaaacaTTAATTGAATGTAATGGTATCAATCAGGGGCAGCAATCATCGAATCTAATTAGCAATACTTCGGATGACAATGGTAATAGAATGGGAATAGATACTGAAACAGTCAATGTGGTCGGTGAAGTGGCAAGTAGTGGTGGTCCAGGGAGCCAACCCATGTCTACTGACCTAACTGGATCCATTCTTAATTTGTCCCAGGTCAACGACACCGAACATATCTTGGATGCAGAGCTCGATGTTGGTGATACAAGCTTCCATGGATTGCAATCAACATGCGTTGACAATTCAGCAAATACTGTGATTTCAGCAAACCAATCGCCGTTGCAAGACAAAAAGGAAACATCTCCGTCCACATCCGAACGGACAGCATCCGATGTCAGTGATTCACTGGCGTTCTTCAACGAAACACTAGACTTGTCCCAGGAAGACATTCAAAGGACGTTAATTGCAAATATGCCATTTGGTGGAAGTAGCGATGTTGTGGTTAACAATCACCATGATGATCGTGTTGTTTCAGATTTGAATCCTATGGATTTTATTGCGAACGTCTGTGACGTTACGAATGGTGCTAAACGTAATTCAAGAGGTGGTGTTCATGATGACGATGACAATGAAGATGTGTTTGTTAATTTAGACGCATTCGATATGCTAGTAGAATTTCCTGAATTGGAATTCGATGGGAAGCATGAATCTGAGTCAAGCTTATCATTTGATAGCAGTCTATCGAGGGTATTTTCGAATTCAAATCGAAGAATTCTTACAATTAGTGATTATAGCCCTGAATGGGCATACCCTGAAGGTGGGGTGAAAGTTCTAGTCACTGGACCATGGAAAATGTCCAGCACGTATACAGTACTTTTCGATTCGGTGCCAGTGCCGACGATCTTGGTGCAAGAAGGTGTTCTTCGGTGCTTTTGTCCTGCTCATGAAGTTGGATTGGCAACTCTTCAAGTTGCATGTGATGGCTATGTTATTTCGAATTcagttatttttgaatataagtCTAGTCCAAACCCGGAAGCTACTTTTGATGGTACAACAAATGATTGTCTTTACAAATTCACTCTTTTGAACCGATTGTCGTCTATTGACGAGAAGATGCAGATTAAAATGGAACCAAAAGAATCGCCTGAAGATGCTGCCTTTATGATGCAATCAAATTTTGAAGAACGAATGGTAAATTACTGTCATCAATTGACTAACAAGTTGTGGCGATCTAATGCTCCAGCCTCCTGGACATCCAGTGGATTCAAAGGAATGACGTTATTACATTTGGCAGCTGCTCTAGGTTATGCAAAGCTGGTGTGTGCTATGCTAAGTTGGAGGGCGGAAAATCCTAATTTTATTCTTGAAACAGAGATTGACGCTTTGAGTCAGGATGTTTATGGATATACTCCTATGacttgGGCATGTGCTAGAGGACACACAGAGACtgctttaattttgtataaatttaatcaaaatgcaATGAAGATCAAAAATCTATCGTTACAAACTCCAATGGATGTTGCCAAGTCTAAAGgatttaaATACCTTCAGGCTGAGTTATCTCGCTTGGAATGTGAGAAGAGTAAAACTAAAAATGATTTAAGCATCTCGTATGATCTAATCAAACAAATCAAGCAGAACTCCACAGATATGTTAAATGGTCAAATTATAAAAGATGAAATTACTGCAAGTAATAATTCAGACAACTCATCTGATAGTCAAAATACTGATGCTGGTGATATTAATAGAAGCCACGATGGAGTTTTTCTGAGGCCTATTGCTGTAGCGAGcAATCAAAGTCCGCCAACAAATAGCCGATATTCAAAAAGATCTTCAATTGATAGTGGAATTAATATGGACATGAGGTCTTTCACAAAATGTGGAAAGCCTTTCAAAGACCATAACAAGTTAACAAGtttcgattgcaACGACTATTCACTCTCAGTAGATTCAACATTCGATGGATTCCCCACTTTAACAAGTTCAAGTTCCCTTCTATCTCCGTTACGCAAAATGGATTTTGCTTTATGCGAAGTATCAACTTGTAGCTCAAGTCCATTGGCCGATAAACATGACGGAGACATGTCAGATAATGAAGACGATCCTGACGTCACATGTAAAAATGATTCTGAGGCGAGCGTAGGGGAATCAGATGCTAAGGTGTTGACCCTTGCAGAGCATATTATAGCTGCGATGCCAGAGCGAATAAagAATGAATCTGATGAAATGATGATTTTGGGCAGTCCAATGTCTGAATCTCTTCATGGTGATAATACTGGAATCAATAACATGCAGGATAGCTTCATGGACCCGTTGTTGGATTCTCTACCGAATACTCACTTCgataatgattttaatttcgACTTCAGTGATCATAATTATCGCTATCATGATGTTAGCACACCATGTTCTAGTTTAAGTCCAGCTAGTTCTGGACCCTTACAATCACCAGCAAGCTATTCTATTCCTCCAGATCCGCCAATGAATTCACCAAGTCCGCCACCATCGACAAAACAACTCACAGAGTTTCTACAAGCATCGAATAATGCTCAGCGACCATTTGAAGCTGATTTTTCCAAACTTACTTTGACTGATAGTGAACAACGAGAGCTTTATGAAGCTGCAAAATGCATCCAAAAAGCCTATCGATCATACAAGGGTCGCCAGAAGATGgaagaacaaaataaagaacGTTCTGCGGCGAttgttattcaaaattattaccGTCGTTACAAACAATATGCTTACTTTCGACAAATGACAAACGCTGCTTTGGTTATTCAGCATGGCTATCGGTCATATTGTAAGAATAAACGATTCAAGAAGTCCCCACAGTCGAATAGTCTTTCGCCAGGGAATAATTTGACATCCAGTTACAATGAAAGTTCATCCCAGTGTTTGTCTAGCTATTTCTATCAACAACATGATAATTCACAACCGACCACACCGAAGGAAACTAGTCCTTCCGGacctttaaaGAGAACATATTCACAGTCAACGCAAAATCAAGCTGCCAGGAAAATTCAACAGTTTATGCGACAATCGAAATTAAAactTCAGAGAGAACGAGCAGAAAAAGAGAGGCTGGTGCACCAACGCAGGGAGGAATACCTCCTAAACTTGCAGTATCAAGAGCAACTGGAAACTGCGCACAATCAAGGACAAAGGTAA
Protein Sequence
MHHTTLGCTFGAISWKIVGVIEIAAILISFDKHSEWQSKEVKTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSLTLWGDKKEWTKEELVSQLKPMLSTVFSDEDSDSGNDIEISNAETVESIVSQLMEKQRLARQAALVKQLECGCPDSTCADGKSCSHPMRRIGIMKSLADKRNDAYNQVTSTTPNVLIGAKLYSRWPDRKTRLEMVTAEAAEHHERQNGEIKFQVIPSHMEQQQQQQHQQQQQFNITRHTQMFAGRNNLIATPSQGPGGGGGVSVNVNVNTSNTNAGNFNQQTFANASNQNNQMNLNRNNMNQIIINQQQQQSHLAGVGNNIIATTTTVTTFSGSGAGATSATHNASQNNNNNNNNNATTNQQQQQLSVLSPQQISLQNSNERNELNSNNSINPSQGHIQHQQQPSQQQQQLQLQHHLHQHQHHQQQQQQQAQKQQNNDLNTSLGGNPSSSSQTEHHSFKQQHQQQQHHQQHQQQHHHHHLLRASLASTTPSITTISGVAAASTSTHSTKSQQHPNSHPHHQQLEQQQSQQHQHHPHHIHHPSQQQQQTLIECNGINQGQQSSNLISNTSDDNGNRMGIDTETVNVVGEVASSGGPGSQPMSTDLTGSILNLSQVNDTEHILDAELDVGDTSFHGLQSTCVDNSANTVISANQSPLQDKKETSPSTSERTASDVSDSLAFFNETLDLSQEDIQRTLIANMPFGGSSDVVVNNHHDDRVVSDLNPMDFIANVCDVTNGAKRNSRGGVHDDDDNEDVFVNLDAFDMLVEFPELEFDGKHESESSLSFDSSLSRVFSNSNRRILTISDYSPEWAYPEGGVKVLVTGPWKMSSTYTVLFDSVPVPTILVQEGVLRCFCPAHEVGLATLQVACDGYVISNSVIFEYKSSPNPEATFDGTTNDCLYKFTLLNRLSSIDEKMQIKMEPKESPEDAAFMMQSNFEERMVNYCHQLTNKLWRSNAPASWTSSGFKGMTLLHLAAALGYAKLVCAMLSWRAENPNFILETEIDALSQDVYGYTPMTWACARGHTETALILYKFNQNAMKIKNLSLQTPMDVAKSKGFKYLQAELSRLECEKSKTKNDLSISYDLIKQIKQNSTDMLNGQIIKDEITASNNSDNSSDSQNTDAGDINRSHDGVFLRPIAVASNQSPPTNSRYSKRSSIDSGINMDMRSFTKCGKPFKDHNKLTSFDCNDYSLSVDSTFDGFPTLTSSSSLLSPLRKMDFALCEVSTCSSSPLADKHDGDMSDNEDDPDVTCKNDSEASVGESDAKVLTLAEHIIAAMPERIKNESDEMMILGSPMSESLHGDNTGINNMQDSFMDPLLDSLPNTHFDNDFNFDFSDHNYRYHDVSTPCSSLSPASSGPLQSPASYSIPPDPPMNSPSPPPSTKQLTEFLQASNNAQRPFEADFSKLTLTDSEQRELYEAAKCIQKAYRSYKGRQKMEEQNKERSAAIVIQNYYRRYKQYAYFRQMTNAALVIQHGYRSYCKNKRFKKSPQSNSLSPGNNLTSSYNESSSQCLSSYFYQQHDNSQPTTPKETSPSGPLKRTYSQSTQNQAARKIQQFMRQSKLKLQRERAEKERLVHQRREEYLLNLQYQEQLETAHNQGQR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00310245;
90% Identity
iTF_00335035;
80% Identity
-