Basic Information

Gene Symbol
mybA_1
Assembly
GCA_951217065.1
Location
OX578273.1:12437153-12441124[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.17 5.4e+02 2.5 0.0 11 46 221 262 219 262 0.81
2 5 6.7e-11 2.1e-07 32.6 0.1 1 44 268 312 268 314 0.94
3 5 1.8e-12 5.5e-09 37.7 0.4 2 43 324 369 323 370 0.95
4 5 9.5e-09 2.9e-05 25.7 0.0 2 44 379 422 378 424 0.89
5 5 1.5e-14 4.8e-11 44.3 0.1 3 44 432 474 431 475 0.97

Sequence Information

Coding Sequence
ATGGAATCTAAAAAGAAAACTCGAAAGTTACCAGCTCGAAAAACAAAGAACCAAAGCGAAACATCCGATAGTGACATTAGTTACACCGAATCcgaggatgatgatgatgaaagcaCTGATACTGATGCCATAAGTTCCGATGATCCCGAAAGAAACCTTTTAGACGAATTCGATTTTGATTATATGGAGGATGTTGTCAAGCTTTTAGAAGAACATGCTGTTGTTAACATGGAGAATTCGATTGTTATAAATCGAAAGTTACAAGACATGTTGGAAGCTATGCgtaacaaaattaattcaatgaTCTACAAGTGTCGCGAAATTTATCAAGAAAACCAAGAGAAGCTTGCCAATCCATCGATGGTTGCTTCCTCTTTAAAGGGAATCGGAAGCTGCGGAAGTCCATTCTTCAAGAATAAACGTGGTAGATCTTGCCCGCCAAATGCTGACTACAAATATCgcagcgaagtcgaaaaagaaCTGTTTCCAAGCGACTTACAACTGTATCCACATTTTACCTGGACAGCAAAAGATAAAGTCGGAATCTTACAAGGAATCAAAGAACAGGCTATAGAATACATTGAACGAAAGAATTCATATGAACAAAAGTTAAACAGCACAAATTCTgccataaataaaaaagtgaaacttCACACACTCAAGCTTAAAAAACTGCTCGAAAAGGTCGATAGTGACTTCGTAATAGATTGGAATCAAATATCCGTTTACAATTTGGGATCGCGACATACAGCTAATAGTTGTTTTGCCAGTTGGAATGCTTATTTGAGACCAGAAATAAATCGTAACGAATGGACAGagaaagaaaacattaaattaaatgaactgGCAAAGCAGTACAAATTTCAAGATTGGATTAGCATAGCTTCCGAGATGCCAGGGAGGTCCGACTATCAATGTTTTGTTCAATACCAGACTGTAGTGTCCGTACAAATGCGAGAAGACAAAGGCGAACGCTGGACTAAAGCCGAAGATGAATTGCTGTTATCGCTGATAGAAGAAAATAGTATGGGTAATGTGATACGATGGAATCCTATATGTTCACAACTACCAAACCGCACAAAAAAGCAGTGCTTTGCCCGTTGGAAATATGGCATTAATCCTAACATATCAAGAGCTAAATTCACTTCTGAAGAAGATTGTGTTATTTTAGCAGCTGTCGAAGAGTTTGGAGAAAACTTCAATTGTTTCCCGAAAGACCTATTTCCAAATCGTACAGTTGTTCAAATTCGAAACAGATATAACAATTCAATAAAATCCCGTGGCACAATCCGTCATTGGTCCCCCGAAGATGACCACTTACTTCTTGATCTCGTCGCAAAGTATGGCGAACACGATTGGACAAATATATCGAAATCAATTCAAAGTCATACTCGAATTAGTTGTCGAACCCGCTATTATActatttcgaaattttttcaAGATAATCCCAATGCGACTGTGGAAGAAATtcctagaaaaaaaagaagaacccGTACGAATGTTACTAAAAGTAATTGGGTAGAAACAATAACTGGGTTGCAGAATggcgaaaaaataaatattgaaccTGTTAATAAAGATTTATACCGTTCTAAATTGCGCAACAATGAACTGCAgtggtataattttttaaaatactcaTATGACTTTAAATTCGGTGAAGGATATTGCAGTGTTCCTAGATCTGTACAGAGTTTGGAATTTGTTCGGCATGTTTTTGAATGCAAATTGAATATGCCAATTTTACTACAAGACCGCTATGCCAAGGGATTTATTTCAGTGACGTTGCAGAAACTTGTACGACTTCATGACCAAAATGATGCAACATTGCTTTTTGAGAGACCTGCCGTTGGATACAAATTACCACCCAATTATAGCACTCTTTTAGCCTTCCGAGGTCTCTGCATTCAAGCTTCATTTAGTAGCAAAGAAGATACAGTTGTTTCAGACGAAAATGAACTGCCAGCGAATTCCCGTAAAGCGAGAAATAAATTCCATCAGCGACTTTTTAGTCTTCTTTATAAAACAACACTTCTAAGTCGCTTAGAGCCCCTAACTTCCGTGGAACACAATACATTTAGAGTGATTTTTGATGCAAATACTCAATTGGGTCAACTAACAGCCATTAATTTGGCTGAGCTAAAGGTTGCTCAAACCAATAAAATTGCTGAAAATCTTTTAATCGCTCAAAACAAAGCagataaaaatcgaaaatataaagaaaagttaaaacaGAAAGCCTCTTTAAGAGAAGAACTCGATAAGGaaattgaaacaatttcaaatacCGACATCACAcctgaagttattaaaaaacaaccatCAATAAAGCAGCCAATCGTatatagaaatacaaaaaatgatgatataaaaaaaactcagacACAAAAAGATTCGGAACTTCTAACTATTGCGAAGCAAAAAATGGATAAAAGACGACAACATGAAGAAACCGACATCACAActgaagtaataaaaaaacaaccaatcatgtcatatgcaaataaaaaagtgCAAGTTATAAATAAAGCTCAGGCAAAAAAAGTTTCAGATATCCTAACTATTGTCAAGCAAAAAGCAGAAGAAAGACGAAAGTATAAAGATATTATAATTGAATACGATGAAAATTCATCTGAATCGAATTCATCAAATCAAACTGATAAAGAGATGCCAATAAAATTAGATAATTGTGTTGAGTCAAATGAAAAAACTACTGTATTATTAGAATTGCCTTCTTTAACGATAGAAGAAGAATCACCTATTTATGAAAAACTGGAAGACATAGATTCATTTGAGATAAAGCATTTTCCTGAACATAAAACTAATgccacacaaaaattaaaaagaaaacgatCATTCGAAGAGAGTTTAATAGTTGAGTCATCATCTCAATCGGGGACATTTGAATCACCCATAgcgacaaaaataataaaatatgagaaggaataa
Protein Sequence
MESKKKTRKLPARKTKNQSETSDSDISYTESEDDDDESTDTDAISSDDPERNLLDEFDFDYMEDVVKLLEEHAVVNMENSIVINRKLQDMLEAMRNKINSMIYKCREIYQENQEKLANPSMVASSLKGIGSCGSPFFKNKRGRSCPPNADYKYRSEVEKELFPSDLQLYPHFTWTAKDKVGILQGIKEQAIEYIERKNSYEQKLNSTNSAINKKVKLHTLKLKKLLEKVDSDFVIDWNQISVYNLGSRHTANSCFASWNAYLRPEINRNEWTEKENIKLNELAKQYKFQDWISIASEMPGRSDYQCFVQYQTVVSVQMREDKGERWTKAEDELLLSLIEENSMGNVIRWNPICSQLPNRTKKQCFARWKYGINPNISRAKFTSEEDCVILAAVEEFGENFNCFPKDLFPNRTVVQIRNRYNNSIKSRGTIRHWSPEDDHLLLDLVAKYGEHDWTNISKSIQSHTRISCRTRYYTISKFFQDNPNATVEEIPRKKRRTRTNVTKSNWVETITGLQNGEKINIEPVNKDLYRSKLRNNELQWYNFLKYSYDFKFGEGYCSVPRSVQSLEFVRHVFECKLNMPILLQDRYAKGFISVTLQKLVRLHDQNDATLLFERPAVGYKLPPNYSTLLAFRGLCIQASFSSKEDTVVSDENELPANSRKARNKFHQRLFSLLYKTTLLSRLEPLTSVEHNTFRVIFDANTQLGQLTAINLAELKVAQTNKIAENLLIAQNKADKNRKYKEKLKQKASLREELDKEIETISNTDITPEVIKKQPSIKQPIVYRNTKNDDIKKTQTQKDSELLTIAKQKMDKRRQHEETDITTEVIKKQPIMSYANKKVQVINKAQAKKVSDILTIVKQKAEERRKYKDIIIEYDENSSESNSSNQTDKEMPIKLDNCVESNEKTTVLLELPSLTIEEESPIYEKLEDIDSFEIKHFPEHKTNATQKLKRKRSFEESLIVESSSQSGTFESPIATKIIKYEKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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