Belo046419.1
Basic Information
- Insect
- Baccha elongata
- Gene Symbol
- -
- Assembly
- GCA_951217065.1
- Location
- OX578273.1:89681578-89682642[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.8e-09 3.5e-06 28.3 0.0 1 42 14 55 14 58 0.92
Sequence Information
- Coding Sequence
- ATGAACAAGCAAGCTTCAAAACGTGTTTTCCACAACTATTCAGAAGAAGCTTTGAGTGAAGCACTTACAAAAATTAGAGATGAACATTGGGCAATCCGAAAGGCAAGCCAAGAATTTAAAGTGCCAAGAACAACCCTTCAAGATAGAATTCATGGTCGAGTTGCCGAAAAGCCTAGGCAAATGGGTCCCGGGACAGTCTTGACCAAACCCGAAGAACAGAGCTTGGTGGATTGGGTTATTAACCTGGCAAAATGTGGATTCCCGCTTAAGCCATCTGACCTTCTGAATacagttcaaaaaattattctagAAGAAAAGAGAACAACACCTTTTAAAGATGGACTTCCTGGCAGAACTTGGTACTATGGCTTTTTAAAGCGACATCCGCAACTGTCCCTCAGAACACCAGAGGGACTTTCGAAAGGACGTTCTATAGTGACAGAGGAGGCAGTAAGAAAATGGTTCAGGGACCTGTTAGAATATCTGCAAGAGATTAATGCTGCAGACGTTCTTGATGATCCTTCCAGAATTTTTAACGGTGATGAGACGTCATTCTGCCTGGCTCCAAAAACTGGAGTAGTTTTGGCCCCTAAGGGATGGAAAAATCTTTACAAAGTGAATCCAGGAAATTATAAGGAGACAATAACCGTCCTTTGTGTGTTTAGCGCTGATGGCCAAACGCTGCCGCCTCTGGTCGTGTTCCCTTATGTGCGCCCTCCAACAGCTTTAGTGAAAAGCATGCCCGACGAATGGGTATTGGGAAGATCGGAGTCTGGCTGGATGCGATCCGAAACTTTTTTCGAGTATGTGGCTAACAGTTTCAACGAATATTTGACGAAAAACAATATAAAGCGGCCAGTATTGTTTCTAGTTGATGGTCACAAGTCCCATCTTACAATGGAATTGAGCGACTTCTGTAGAGGCAATGGGATAATTTTGTATTCACTGTTTCCAAACACAACCCATATTACACAGCCAGCGGATGTTGGCGCATTTAAAGGATTGAAGACGgacccaaaacaaaaaagaaaaaaataccatgTTCTCAATGTGATGAGGACTTAA
- Protein Sequence
- MNKQASKRVFHNYSEEALSEALTKIRDEHWAIRKASQEFKVPRTTLQDRIHGRVAEKPRQMGPGTVLTKPEEQSLVDWVINLAKCGFPLKPSDLLNTVQKIILEEKRTTPFKDGLPGRTWYYGFLKRHPQLSLRTPEGLSKGRSIVTEEAVRKWFRDLLEYLQEINAADVLDDPSRIFNGDETSFCLAPKTGVVLAPKGWKNLYKVNPGNYKETITVLCVFSADGQTLPPLVVFPYVRPPTALVKSMPDEWVLGRSESGWMRSETFFEYVANSFNEYLTKNNIKRPVLFLVDGHKSHLTMELSDFCRGNGIILYSLFPNTTHITQPADVGAFKGLKTDPKQKRKKYHVLNVMRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00188018; iTF_00188019; iTF_00188020; iTF_00187993; iTF_00187996; iTF_01522507;
- 90% Identity
- iTF_00187996;
- 80% Identity
- -