Belo046814.1
Basic Information
- Insect
- Baccha elongata
- Gene Symbol
- -
- Assembly
- GCA_951217065.1
- Location
- OX578274.1:3038897-3046587[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.5e-11 6e-08 33.9 0.0 1 38 36 73 36 78 0.91 2 3 3.7 3.4e+03 -0.5 0.1 11 22 155 167 155 168 0.81 3 3 0.16 1.5e+02 3.9 0.0 6 37 360 392 356 398 0.80
Sequence Information
- Coding Sequence
- ATGGGAGTGGCAATGAAAGCATCTTTGAAGCCTTTGAAGTCGTTTTATTTCaagAAATGCCgacagtttataaaaaaaaaatcatctgcaAATCGTGCACAATGGACACAAGACCAACTCACAGCAGCCATTGAAGCTGTCCATGCAAAAACAATGTCCATAAAAGCAGCTTCAAAGCACTTTTCAATTCCTTTCAACACCCTTAGACAACGCATTAAAAATCCAGACGCTAAAAAACCTGCTTTGGGATCCGTATCCTGCTTAGGGGAAGAAAGGGAATTGAAAATTGTGTGTCACATAAAAAAACTCCAGGCACACGGATTTGCTCCATCTAAGAAGGAAGTGTGCCAAATGGCCTATCGATTGGCAGAAAAGTGCGAGATAAGGCACAAAttcaacaatttgaaaaaaaaagctggAAAGGACTGGTTCATTTTGTTAATGAATCGCCATCCTGATCTAGCAGTTCGAAAATCAGAGGGAGTGTCGCAGTCACGAGCCAAAGCTATGTCTAGGACAGAAGTGTCTACCTATTTGATGGAAAAAACCTTGACGGAAAATAATTTGCTGGACAAACCCGGTCATATTTATAATATGGATGAAACTGGGTGTCAACTCAACAATCGGCCCTCTTTCGTTATTGCAGAGAAAGGATCGCGCAACGTTACTGCAATAACATCGGCAGAAAGAGGTGAGACAATAACAGTCATTGCATGCTGCAACGCAGAAGGAAATTTCTTACCACCAGCCTGTGTTTTTAAAGGGTCAGGGTTTTCTTTGTTTATCGCTGTCGCTGCCCGTGATTTAACACTCCCATGTCGACATATCGTTCTGGACGTGGACGGTTCACTTAAAAATCAACTGATTGATAACAATCGATGCTTGGGATACTCAAAAACGAATTTGGATAGTGCAACGGTACCATGCTTTTGCAGTCCGTCATTTGGACGGGAGTTTGGTGGTACTCCCCCGAGTGAATGGACCATTATGAGGCTAGTGAGACTGTTTGCTGAATCTGGAAGCATCACACGAAGGCCGTACCATCGAGATTCCAATGTTCAGGTTCAGGATACAATCGCGGCTGTAGCATCGGCAATACAGGCAAATCCAAGCGTTTCGACTCGAAACTTATCGGGGCAAGTTGGAGTTAGCAGACGGTCATTACAACGGATACTTCATGATGACTTACACTTGTTTCCATACAATGTCCAAGCAAGTTAA
- Protein Sequence
- MGVAMKASLKPLKSFYFKKCRQFIKKKSSANRAQWTQDQLTAAIEAVHAKTMSIKAASKHFSIPFNTLRQRIKNPDAKKPALGSVSCLGEERELKIVCHIKKLQAHGFAPSKKEVCQMAYRLAEKCEIRHKFNNLKKKAGKDWFILLMNRHPDLAVRKSEGVSQSRAKAMSRTEVSTYLMEKTLTENNLLDKPGHIYNMDETGCQLNNRPSFVIAEKGSRNVTAITSAERGETITVIACCNAEGNFLPPACVFKGSGFSLFIAVAARDLTLPCRHIVLDVDGSLKNQLIDNNRCLGYSKTNLDSATVPCFCSPSFGREFGGTPPSEWTIMRLVRLFAESGSITRRPYHRDSNVQVQDTIAAVASAIQANPSVSTRNLSGQVGVSRRSLQRILHDDLHLFPYNVQAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -