Belo025158.1
Basic Information
- Insect
- Baccha elongata
- Gene Symbol
- -
- Assembly
- GCA_951217065.1
- Location
- OX578272.1:27104639-27105634[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-13 1.1e-10 42.7 0.0 2 44 71 114 70 115 0.93 2 2 2.6e-10 2.4e-07 32.0 0.0 3 39 182 218 181 223 0.91
Sequence Information
- Coding Sequence
- ATGTATAGCTATGTCATTACACATGACAACAAAGTGCCACCTGACATCTCCAACCCAGTACACGAATTATCAACAGATTATATCGTTTCAATTGCAAATGTTGAAGAAGAAATACCAAACCCATACACAATTACCGTAGAAATACCAGTTGAAAATAATCAAGATGAAAATTGTAAGGAGAATTCACCAAAAAGAAGACGTGCTTTAGTCCGCGAACGTCTTGCAGAAGCTGTCGACGCTGTTGTCAATAAAGATATGACCATTGGTAAAGCTGCCAAAGCCTTTGAAGTGACAAAGAGTACACTATGGAAAGAAGTCAACAAACACACCAACCACCGAAAGAAAAAAGTTGACGAAGATCTCAATAAGAAGATTGCTGATCTTATATGTGCGGGTGAATCTCTATCAGAAATTTCTAGAACCTTAAAAGTTGCCAAATCTACTATACATTTGCATAAAGTTCGACTCGCTCAAACTGGCCAGCTTCCATCAAATGTAACCTTTAAACCACCTGTAGACAAAAATGAGCAACTAGCTATGAAAGACCGTATTATTAAGGCATTTCGTGGTATTCGCGTAAATGGCATGTCGATACGTTTAGCTGCAGAATTTTTCTCCGTACCACGTTCGACATTGTGGAAACACATTCGACGATTTAGAGCTTCTCAACAAACAGTAAAAGCTCAACAATCAAAAAGTCCCAAAAAAGTTCTGACAGAGATATTCAATGAAAATACTTCAGAGCTCACCAGTGAACAGGAAGATACTGAAGCAGAAGACGATCCAGCTGAAGAAGAAAGTGAAGTTATTGCAGAAGACTATACTTCCGACGGATATTCTACCAAAGAAAGTGAAGGAGTTAATTTGGAAGATTTTGATTTACTAGACGCTTACTGTGAAGATGAGGCAACAACTCTCAACGGTGCAGAAGAAGACTTCTTAATAACTTTTGACTTTGATACTTTTGAAGAGTATGTGAAGAGAGAGCTCGATTAA
- Protein Sequence
- MYSYVITHDNKVPPDISNPVHELSTDYIVSIANVEEEIPNPYTITVEIPVENNQDENCKENSPKRRRALVRERLAEAVDAVVNKDMTIGKAAKAFEVTKSTLWKEVNKHTNHRKKKVDEDLNKKIADLICAGESLSEISRTLKVAKSTIHLHKVRLAQTGQLPSNVTFKPPVDKNEQLAMKDRIIKAFRGIRVNGMSIRLAAEFFSVPRSTLWKHIRRFRASQQTVKAQQSKSPKKVLTEIFNENTSELTSEQEDTEAEDDPAEEESEVIAEDYTSDGYSTKESEGVNLEDFDLLDAYCEDEATTLNGAEEDFLITFDFDTFEEYVKRELD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -