Belo032997.1
Basic Information
- Insect
- Baccha elongata
- Gene Symbol
- -
- Assembly
- GCA_951217065.1
- Location
- OX578272.1:165487045-165491874[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4e-13 1.3e-10 42.5 0.0 3 43 295 335 293 337 0.91 2 3 0.039 36 5.8 0.0 27 37 366 376 357 382 0.86 3 3 1.2e-14 1.1e-11 45.9 0.0 5 41 406 442 403 445 0.90
Sequence Information
- Coding Sequence
- ATGAATCACCTTAAATGGATGGGCCATACGGCAACCATTCTCGACATTCAGAAGGCTCTCAAAAATGATCCAGCAACATGTGACATTACACTTACCTGTCGCGGTAAATCGGTGAGAGCCAATCGCTTTGTATTGTGCTCCTGCAGTGACCTACTGCGTGATCTTTTACATGATGTACCCCTTGGTGAGGAAGCCACCATAATAGTACCCGATATCAAGGGTATATTATTGGACAGTGTATTGAGTTTCGTTTACATGGGCGAGACGAGTCTATCGTCCACGAATCTCTCTGACTTTCTTGAAGCTATTAATGTTCTTGGAATCAAAAGTGCCATTAGTTTTGAATGTGCGACCAGTTATTCTGCGAATAACATAAAGACGGTGCCAGAAACTACCGAGATGGAAGAGGAACTTATGGATGCTGAGCCAGAGCAAGAAATCGTTGAAAAAGACGATGAAGaggATCAAACAGGTGCTGGAGATACCAGTGTACGGGAACTTGAATTCCTTGAAGTCTACAATGAGCAAGACAAGATCAGCTACACTATCGAAAATATTGCCCCAAACAATCCAAATGAATACATCCTAACAGAAAGTTCAGGTACTTTTACTCTAACACCAAATTCGAAAATAGATGCCAATGAAATCGGTACAATGGTTGAAAAGAACGACGATGAATCTCACTTAATAGAACAATATGTTAGTGATCCTATAGGTGACAGTAGCCACTGTTCGAGCACAGACCAAAAAGATAACAGAcccagtaaaaaattaaaagatgaaTTTAGTGAATTTCAAGCGCTCAGTCCGGAGAACAATAAAGATGAATCAAAAGCCAGTGGAAGTTATCAAAACTTTAACGAAACCCAATCGGCACGAGTAGAAGCATTAGAAAATGCAGTATTAGCTGTGGTAGACGAAGGTATGAGTCTACAGAAAGCCGCTGTTAAATTTAACATATCAAAAACAGTTTTGTGGCGAAGAGTTAAAAAACATCCACTTTATATGAAAACAACACGCGAGAATCCACTCATAACAGCGGCCTGTGAACGGCTTAAAAATGGCGATTCACTCAAAAGTATAAGCCAAGCTCTTGATATACCCATGTCAACACTGCATCGACATAAAGTGAGACTTGCACATGAAGGCAGGCTACCCGATTATGTTACATTTAAGAAGCGAGGTCCATTATCCAAAGAAGTATTGAAAGCTAAACTATATAATGCAGTCAATGCCTGTTTGGGCAACGGAATGTCCCAGAATCATGCAGCGAATGTATTCAATGTGCCAAAGAGCACACTTTGGAGACATTTGCAGAAAAAAATGTACCACAACGCAGATGAATCAGAATCGGAAGGTACATTATTGATAAAAGAAGAAATTGTTTTGCCAGAGAATTGA
- Protein Sequence
- MNHLKWMGHTATILDIQKALKNDPATCDITLTCRGKSVRANRFVLCSCSDLLRDLLHDVPLGEEATIIVPDIKGILLDSVLSFVYMGETSLSSTNLSDFLEAINVLGIKSAISFECATSYSANNIKTVPETTEMEEELMDAEPEQEIVEKDDEEDQTGAGDTSVRELEFLEVYNEQDKISYTIENIAPNNPNEYILTESSGTFTLTPNSKIDANEIGTMVEKNDDESHLIEQYVSDPIGDSSHCSSTDQKDNRPSKKLKDEFSEFQALSPENNKDESKASGSYQNFNETQSARVEALENAVLAVVDEGMSLQKAAVKFNISKTVLWRRVKKHPLYMKTTRENPLITAACERLKNGDSLKSISQALDIPMSTLHRHKVRLAHEGRLPDYVTFKKRGPLSKEVLKAKLYNAVNACLGNGMSQNHAANVFNVPKSTLWRHLQKKMYHNADESESEGTLLIKEEIVLPEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00311727;
- 90% Identity
- iTF_00188348;
- 80% Identity
- iTF_00188348;