Basic Information

Gene Symbol
ct
Assembly
GCA_951217065.1
Location
OX578274.1:12595683-12640980[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2e-26 3.9e-22 79.7 0.0 3 71 788 857 786 863 0.94
2 3 7.9e-32 1.5e-27 97.0 0.0 3 77 1230 1305 1228 1307 0.96
3 3 1.1e-30 2.1e-26 93.4 0.0 3 77 1451 1526 1449 1528 0.96

Sequence Information

Coding Sequence
ATGGGTGACTGTGCTGTCCATAGAGAGAGAGCTACATTGGCTGAAAAAGAAGTTAATACTTTAAAAGAACAATTGTCAACAACTTCAActgtaacaacaacaacatcgaCGTCATcgacaacaaccacaacagcgtCTTCGATACATTCGTCGCCACCATCTCCGACATCGGTGAGCACAACACCAATACCAAATATCAAATTATCATCACCAACgataaataacaacaataatttcaataataataataataacaataaattgaaCAGTGTTGCCATATCACAGCATTTACATCAGAACGGAAATTTATTGGCAGCCACACCATCACCATCGCCGCCATTATCCGAAAACGGTAGCACACTCAACGGATGCCTAAATTCGGCAAAATTACTCTTCAATCATAATCAAATAATGGACACAACATCCGCTGTATCAAATACCGTTACCGATTTATCTGCCCTGTTAGCAGCTGCAGCACCCACAACCACCACCGGATCAACAACCATAACGGGTGCAACCATAACGGATGCCAGTAAACTTATAACGGCAATGACCGCCGAAATGAATCTCCACCAAGACTCCAGCGAATCGGCAACATTGGCGAGCAATCAAATGTCAAATCGATCGCACAGTCCCCTGCTGTCGGCGATAGAAGGCAATAGTGGGGGCATAGATGCAACaagaaacaataataataatagtactaataacaataataataccaATACAAATAGTAATAATAGCAGTAGTAATTGTAATAATAATTTAGCTGATGAATTGGCTGCCAAAGAAAAAGAGATTAAAGCACTTATCGACGAGGTTAACCGACTGCAAGCCCTCCACGAAACCCACATTGTACAAATACAAAGACTTGAAGATAATCTTGAGGCAAAACGTCAACACATTCTGCGGCTTGAAACACGTCTACATCAACAGCAATTCAAAAGCTCTGACACTTTGGAGGTTCCATCCGAATCATGTCCTGAAGAAAATCAGCTGAGGGATGAGACAGAATCCTCGTTGGTCGTAAGATCCGAGCCATCGTTGGTGGAAGttgaagaaattcaaataaaaaaggaaaaccaATcacaaccaccaccaccaccaccaccaccgccaCCACCATCATCAACGACAGTCGACATCACAAGTCAGTCAGTGGCAGCTGCGGCTGTGGCGGCAGTTGCTGCCAATGACCCCAAACAGTTTCAAGAACTTTTGATCGAGAGAAGTAAGGCGCTGGCGGCCGCAGCTCATGCTTCGACTGAGGCATTGGAAACCGAAGGAATTTCCAGTGACACAACCGTTGTTGCAGCATCAGTTCCATCAGATACAATCAATACTGCTTCTGATAATGAACTTGCAGATTGTGAGATCTCTAACAATGATTTATTCGATGCAAATCTTCAGCATCAGCAGGAAGTACATTCTTCATCCGAGTCAATAGCTGCATCTGATCAGAATTCGTCATCGAATTTCCAAACTGTCGATCAGTTTGGTTCGCTGCTTGGCGGCGAGTTGGTTAATTCATATTGGCGTCGTGGCTTTGATCACCTGCCATTAGCTCCACCACCTCCGATGCCCTCGCAACAGCAATCGCCAGCAACTGCTGCTGCAGTCTCTGCTGCAGTTTCGATAGCAGcacaaccacaaccaccacCACAACCACCACAATCAATAGCaataacagcaacaacaacaaatccaACCTCTAAAACGCCAACATcgattttccaaaatttccCATCAATTCTTTCGTGTCGATCGCCTCCACCACTTCCATTGTCGGTTACGGGGCCATCAACCACAACTCTCTTGAGTCAGCTAGTCAATTCAACCTTCTCATCGAATTCAACTCCTTCTCTTCGAACAGATTCCCATTCCTCGACGTCGACCACCACGACTACGGGTGCCCACCTGCAACAGCCTCCACTGCACCACCATCAGCATTTACATCATCAGCATCCTGCCCTAcaacatcatcaacaacaacaacagcagcagcatcaCCAGGATTTCGAGAAGACAAACAGCCATCACGATTCCTCATCAACAGCCAGCACGCCCAATCTGCAAGACCAGCGTTCCAACGATGGTCACATGAATGGCTCCAAATCTGCCAAAGCTCTTGAAGATAACAATAACTCACTGGGCTCCCTGACACATCTTCCACCCGCATTCCTGCCCGGTTTGCCATTCCAATTCCAGGATCGTGGTCACTTCCGTTTCGCCGAAGACATTCAGCTTCCACCTGGAGCCTCTATGGCTGGCCGCCTGGGAGAATCCCTCATACCCAAGGGCGATCCGATGGAGGCTAAGCTCCAAGAGATGCTCCGCTACAACATGGACAAATACGCCAATCAAAGTTTAGACACACTCCACATATCACGACGCGTTCGAGAACTTCTCTCCGTGCATAACATCGGACAGCGACTTTTTGCCAAGTACATTCTCGGCCTATCACAAGGCACCGTCTCCGAATTGCTGTCCAAGCCAAAGCCCTGGGATAAACTGACTGAAAAAGGCCGTGACAGTTACCGCAAAATGCACGCCTGGGGATGTGATGATAACGCTGTGATGTTGCTTAAATCCCTCATACCCAAAAAAGattcaGGAATTCCTCAATACGGACGAAATGAGGATTCCATGTCGGATGATCGTATTGCACATATATTAAATGAAGCTTCCAGCCTTATGAAGACCCCACAGGGACCAGGATCGCAGTTACAGCAACAAATGAAACATGATTCTCAGCGCCAACATCAGCAGCATTCTTCTTCACTGGATGATGAACAAAGCAATGATGATTCAAAATCACCGCATGCATCTTGTACTTCACCATTTTACAAGGATTCGCCAgtgcaacaacagcaacagcagcagcagcaacaacaacagcagcaacaacaacagatccagcagcagcagcagcagcaacatcagcaacgtCAAGAGGCCCAGCGTCGAAGTGTGAAGCCTGATGAAATGTCTCAGGACAAGATGGCGAGAATATATCAAGAAGAGTTACAAAAACTCATGACCCGTACTCCACGTGACACATTTCCAAGttttttgtttccaCATTTTTTCAGTGCGGCTGGTGGTCTTCCACCTGCCAATAGTGCAATGCCACCTGATGATAACATTCGCATGGCTTTCGAAGCCTACCACCGTGAAATGGCCAAGTTGCAGCAGAATAACAGCGGAAATATTCCACATTTTCCGAATTTCTCCAGCTTAATGGCGTTGCAACAACAAGTGCTGAACGGCGCACAGGATCTATCCGTCCCAAAGGAAAACGAAATCAAAGTTAACGGCCAACGACACTCGATGGAGAGTTGCGATTCCTCCTCGAATCAAACCAAAGAAACTGCTGAAGAAGCTGCGCATCGTCACTCAAGTGCATTTAGTTTAGTACGTCTTAAGCCAGATCCAGCGCCTGCTCCTAATTCCAATTCGAATCAGAATACCAATTCAGCTGCTCCCAGTCCACTTAGTAATTCGATACTTCCACCAGCAATGACACCAACAGAGGACTTCTCCACGGCTGCCAGTCCACTGCAGAGAATGGCTTCAATTACAAATTCATTGATTACGCAGCCTCCAGTAACGCCGCATCATACTCAGCCACAAAGACCCACCAAAGCAGTGTTGCCACCAATCACACAGCAACAATTCGACATGTTTAATAACTTGAACACCGAAGACATTGTTCGACGAGTGAAGGAAGCTTTGTCACAATACTCAATAAGCCAAAGATTATTTGGAGAATCGGTTCTGGGATTGTCACAGGGATCGGTCTCTGATCTGCTTGCCCGACCAAAGCCCTGGCATATGCTAACGCAAAAGGGTCGTGAACCATTTATCCGGATGAAAATGTTCTTGGAGGATGAAAATGCAGTCCACAAGCTTGTAGCCAGCCAATATAAGATAGCACCAGAGAAATTAATGCGAACTGGTAGTTATAGCGGCAGCCCACAAATACCACAAggtcttgcaaataaaatgaacaGCCTTcccatgcaaaagatgatgaaCGAGCTGAAAATGGAACCTCAAGCTCAACACATTATGCAGCAAATGCATGCAGCTTCGGCAATGGCTGCGGCCGCTGCTGCAGGACATATGCAAAATGCACAACATCAAGGTATGTTGCTAACTACACCGGGACTTCCACCTCAACATGCAATAAGCCTGCAACAGGCCGCTGCAAATGCTGCAGCTGTTGCTGCTGCCAATGAAAAGAAGCCCATGATGATGCCAATTCACTCACCGCACCAAGCCAATGCTATGAGAAACAGTATGCACCAGCACATGTCACCGACAGTTTACGAGATGGCAGCCCTCACTCAAGACCTGGACACACAGGTTATCACCACCAAGATAAAAGAAGCTCTCCTGGCAAATAACATTGGTCAGAAGATTTTTGGCGAAGCAGTCTTGGGGCTGTCACAAGGGTCCGTTTCGGAATTGCTCTCAAAACCAAAACCATGGCACATGCTGAGCATAAAAGGCCGAGAGCCCTTCATTCGCATGCAATTGTGGCTATCCGATGCAAACAACGTCGAACGTTTGCAGGTACTTAAGAACGAACGTCGCGAAGCTAGCAAACGCCGCCGCTCTACAGGTCCCAATCAGCAAGACAATAGCTCGGACACAAGCAGCAACGACACTGCTGACTTCTACACTAGCAGTCCTGGTCCAGGTTCAGTTGGTTCAGTAGGAGCTCCACCAAATAAGAAACAACGAGTTCTCTTCTCAGAAGAACAAAAAGAAGCACTCCGCTTGGCATTTGCCCTCGATCCATATCCGAATGTGGGAACaattgaatttttagccaaCGAACTTGGTCTTGCAACCCGAACCATCACCAATTGGTTTCACAATCACCGAATGCGACTAAAGCAGCAGGTACCGCATGGCCAGCCAACAGAACCCGTCCCAAGTCGAGAAAATACCAACGCAACACCATTCGATCCAGTCCAATTCCGTATACTCCTTAATCAAAGACTGATGGAATTGCAAAAGGAACGCATGGGTCTTAGTGGCGCTCCCATTCCCTACCCACCGTACTTTGCTGCCAATCCCAATCTGGCGGCATTAATTGGTCGTGGTTTGCTCCCTGGTGGAGCTGAACCTGATCTGCAAGCCCTTAATAACGCCTTCCGAGAACAAATGAGTGGTCTAGACCTTTCTCTTAAACGAGAACGCGATGGCGACTACGACGATGATGGCGAAGACGAAAGTCATATGTCTGACAATGAATCGATCAATGAAAGTGATGAAAAATCTGAAATGAGTGAAACACCAAGATCTTCACATTACGGAGCGATGGGACAATCCCGAACATCAAGGCGCAAGCCCGCCGCACCGCAATGGGTCAATCCTGAATGGCAGGGTGATGGAAAAACCGGATTGATGCCACCCATGCCCGCTGGTGGTCCCTCCGACAAGGAAGTCATCATAAACGGTGTATGTGTGATGCAACAACAAGCTGCTGATTACAGTCGAAAATCTGGCAATGGCGATGACGACGAAGAAGGCGCTTCCGATGCCAATGACGAAGAACAATCCACTCATCATCGTGGACAATCTTCAGATTGTGAAGACACACCCGCTGACATCGACCAAAGGTTCATGGAACCCGAAGTTCGAATCAAACAAGAAGAAGACTGTGACAGCAACGATAGCCACCAAGATGACTCGAATTCCAGAAAACAACAACACCACCAACTTCATCGGGACGAGGAAGATGACACTCCTGGTGCatggaattattaa
Protein Sequence
MGDCAVHRERATLAEKEVNTLKEQLSTTSTVTTTTSTSSTTTTTASSIHSSPPSPTSVSTTPIPNIKLSSPTINNNNNFNNNNNNNKLNSVAISQHLHQNGNLLAATPSPSPPLSENGSTLNGCLNSAKLLFNHNQIMDTTSAVSNTVTDLSALLAAAAPTTTTGSTTITGATITDASKLITAMTAEMNLHQDSSESATLASNQMSNRSHSPLLSAIEGNSGGIDATRNNNNNSTNNNNNTNTNSNNSSSNCNNNLADELAAKEKEIKALIDEVNRLQALHETHIVQIQRLEDNLEAKRQHILRLETRLHQQQFKSSDTLEVPSESCPEENQLRDETESSLVVRSEPSLVEVEEIQIKKENQSQPPPPPPPPPPPSSTTVDITSQSVAAAAVAAVAANDPKQFQELLIERSKALAAAAHASTEALETEGISSDTTVVAASVPSDTINTASDNELADCEISNNDLFDANLQHQQEVHSSSESIAASDQNSSSNFQTVDQFGSLLGGELVNSYWRRGFDHLPLAPPPPMPSQQQSPATAAAVSAAVSIAAQPQPPPQPPQSIAITATTTNPTSKTPTSIFQNFPSILSCRSPPPLPLSVTGPSTTTLLSQLVNSTFSSNSTPSLRTDSHSSTSTTTTTGAHLQQPPLHHHQHLHHQHPALQHHQQQQQQQHHQDFEKTNSHHDSSSTASTPNLQDQRSNDGHMNGSKSAKALEDNNNSLGSLTHLPPAFLPGLPFQFQDRGHFRFAEDIQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQSLDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVMLLKSLIPKKDSGIPQYGRNEDSMSDDRIAHILNEASSLMKTPQGPGSQLQQQMKHDSQRQHQQHSSSLDDEQSNDDSKSPHASCTSPFYKDSPVQQQQQQQQQQQQQQQQQIQQQQQQQHQQRQEAQRRSVKPDEMSQDKMARIYQEELQKLMTRTPRDTFPSFLFPHFFSAAGGLPPANSAMPPDDNIRMAFEAYHREMAKLQQNNSGNIPHFPNFSSLMALQQQVLNGAQDLSVPKENEIKVNGQRHSMESCDSSSNQTKETAEEAAHRHSSAFSLVRLKPDPAPAPNSNSNQNTNSAAPSPLSNSILPPAMTPTEDFSTAASPLQRMASITNSLITQPPVTPHHTQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMNSLPMQKMMNELKMEPQAQHIMQQMHAASAMAAAAAAGHMQNAQHQGMLLTTPGLPPQHAISLQQAAANAAAVAAANEKKPMMMPIHSPHQANAMRNSMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTADFYTSSPGPGSVGSVGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPTEPVPSRENTNATPFDPVQFRILLNQRLMELQKERMGLSGAPIPYPPYFAANPNLAALIGRGLLPGGAEPDLQALNNAFREQMSGLDLSLKRERDGDYDDDGEDESHMSDNESINESDEKSEMSETPRSSHYGAMGQSRTSRRKPAAPQWVNPEWQGDGKTGLMPPMPAGGPSDKEVIINGVCVMQQQAADYSRKSGNGDDDEEGASDANDEEQSTHHRGQSSDCEDTPADIDQRFMEPEVRIKQEEDCDSNDSHQDDSNSRKQQHHQLHRDEEDDTPGAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00976241;
90% Identity
iTF_00187951;
80% Identity
iTF_00187951;